mRNA_H-elongata_contig69770.14625.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig69770.14625.1
Unique NamemRNA_H-elongata_contig69770.14625.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 3.970e-74
Identity = 151/323 (46.75%), Postives = 212/323 (65.63%), Query Frame = 1
Query:    1 DLSASFERLSL-AKSDVTIPLLTSYASLSGVSIAGPCVKVGEFVPKANPIPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEGGGWISCTCKCGRDCTGPTHVFDLNGTPHPNNDFGSCD---DGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATLWMSL-PEGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGS--FVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGFGVLV 948
            DL+ +  R+S+ A S++ IP L++++S   V++AG  V+VGE VP A  IP ++ +   YLKAMQAHTQ EF AS ++GV++A R +GGGW+  TC+           + ++G    N   G+ D   DGHNF  + W+RH+V+ E  ++ ALVV C    + + A L ++   +G+         R+RSLGYVG FLREYGSAA LL+ +   SLL   V+APG++   PS+ G+  F+P   +  L+ S VPLN  Q+DAVL+LTGGLD++VGPPGTGKSTTIY+I ++R+    R+L+TSIRNQAVDAV+ KV  FGVLV
Sbjct:   31 DLTRAMGRMSVRATSNIRIPPLSAFSS-GAVAVAGSAVRVGECVPPAEDIPTNFRTPTAYLKAMQAHTQKEFEASARQGVSNADR-QGGGWLVLTCRPNPRWQDSRLSYYVHGKSE-NGGLGTRDTEEDGHNFKQDPWSRHLVEFEDSSI-ALVVACGEGVTDNEAFLAITPGTDGIPVRSEHLHTRVRSLGYVGSFLREYGSAAELLRRDESDSLL-NAVAAPGQQCTLPSSSGAGTFLPRGQVRTLDTSSVPLNATQKDAVLSLTGGLDLVVGPPGTGKSTTIYHINESRIRAEGRVLITSIRNQAVDAVTEKVDSFGVLV 348          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.720e-33
Identity = 102/257 (39.69%), Postives = 153/257 (59.53%), Query Frame = 1
Query:    1 DLSASFERLSL-AKSDVTIPLLTSYASLSGVSIAGPCVKVGEFVPKANPIPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEGGGWISCTCKCGRDCTGPTHVFD---LNGTPHPNNDFGSCD------DGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATLWMSLP--EGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGS--FVPANAIDKLEA 729
            DL+ +  R+S+ A S++ IP L++++S   V++AG  V+VGE +P+A  IP ++ +   YLKAMQAHTQ EF AS ++GV++A R +GGGW+  TC+       P   +    L+   H  ++ G  D      DGHNF  + W+RH+V+ E  ++ ALVV C    + ++A L + +P  +G+         R+RSLGYVG FLREYGSAA LL+ +   SLL   V+APG+    PS+ G+  F+P   +   EA
Sbjct:   31 DLTRAMGRMSVRATSNIRIPPLSAFSS-GAVAVAGSAVRVGECIPRAESIPTNFRTPTAYLKAMQAHTQKEFEASARQGVSNADR-QGGGWLLLTCR-------PNPRWQDSCLSYYVHGKSENGGLDTQDTEEDGHNFKQDPWSRHLVEFEDSSI-ALVVACVEGVTDNQAFLAI-VPGADGIPVLSEHLQTRVRSLGYVGSFLREYGSAAELLRRDESDSLL-NAVAAPGQCT-LPSSSGAGTFLPRGQVFGNEA 274          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A2P6TVU4_CHLSO (DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVU4_CHLSO)

HSP 1 Score: 132 bits (332), Expect = 6.410e-31
Identity = 106/282 (37.59%), Postives = 149/282 (52.84%), Query Frame = 1
Query:  145 IPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEG----GGWISCTCKCGRDCTGPTHVFDLNGTPHPNNDFGSCDDGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATLWMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSL------LLKTVSAPGR--KKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGF--GVLV 948
            +PD++ S   YL AMQ+   +EF ASI++ +  A R++      GW     +  R  +G + + D  G  H    F     G +F  ++W RH+VQ+       L +  K           M+L   V C+    S  MR+LG+VGPFL +Y +A  L      S+L      LL  V  P     +G  ST    +PA A  +L   +VP+N +QR AV  L GGL+II GPPGTGKSTTI+++IDA V  +A++LVT  RNQAVD+V  KV+    G+LV
Sbjct:  101 LPDAFSSDGAYLDAMQSTAALEFQASIRQALEQAEREQRRTGVSGWHEFVPQRSRR-SGGSLLLD-GGESHGTWVFAGHT-GVDFEQDSWGRHLVQVRETGSFHLAIMAKQDDETQEHV--MALLPTVECS---GSASMRTLGFVGPFLAQYEAAQGLRYSLHCSTLPDRTRQLLAAVVRPSTLYSRGAAST---LLPAGA--RLRTDEVPINASQRAAVEALRGGLNIIHGPPGTGKSTTIFHLIDAGVQPDAQVLVTCTRNQAVDSVVDKVARLEGGILV 369          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA)

HSP 1 Score: 122 bits (305), Expect = 4.470e-27
Identity = 102/299 (34.11%), Postives = 135/299 (45.15%), Query Frame = 1
Query:  112 KVGEFVPKANPIPDSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKE--------GGGWISCTCKCGRDCTGPTHVFDLNGTPHPNNDFGSCDDGHNFNNETWARHIVQIEGQALPALVVTCKCTSSYHRATL-----------WMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAARLLQGNVGSSL------LLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSG 933
            K GE    A  +PD + S   YL  MQAHT +EF A+    +ASA  +           GW+S          G +  F   G P                   W +H+VQ+            K T SYH A L            + LP      R +  ++MRSLGY+G FL +Y SA  L       +L      +L+  + P R+    S+ G          L    VP+N  QR AV  L GGL II GPPGTGKSTTI++I+++RV   A++LVT  RNQAVDAV  K++G
Sbjct:   65 KAGE----AAALPDVHASPEAYLTDMQAHTALEFQAAAAAALASAEGRHPEPAQLWWNFGWVSDAKWRALRTRGQSLDFSDEGEP-------------------WVKHLVQV------------KETDSYHVARLARRDPDSGDDVLVLLPTVEAGGRAREVVQMRSLGYLGSFLLQYTSAQALRYQLRTRTLPPAAQHMLQLAADPTRQL---SSSGQGTLRRGPVHLLTDTVPINAGQRAAVEGLQGGLSIIHGPPGTGKSTTIFHIVESRVQPRAQVLVTCSRNQAVDAVVGKLAG 325          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A812VWA8_9DINO (UPF1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812VWA8_9DINO)

HSP 1 Score: 71.2 bits (173), Expect = 7.330e-10
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  526 RYKSSI--RMRSLGYVGPFLREYGSAARLLQG-NVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDK-NARILVTSIRNQAVDAVSAKVS 930
            R+ S I  ++R+  +VG ++  Y  A  LL G  +    L K V  P R+       G++    A   L    +P+N  QR AV  L+  L+II GPPGTGKSTTI++++ +R+   ++  +VT + NQA+DAV  K++
Sbjct:  162 RFHSDIILKLRAHIFVGDYMNRYRCARELLNGIGLTDPQLEKAVLKPWRQ-----VPGTYTRPGA---LREDLMPINSDQRSAVHGLSSRLEIIHGPPGTGKSTTIFHMLSSRLPSMDSAAIVTCVTNQAIDAVVEKLA 292          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A812Y2V5_9DINO (Upf1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812Y2V5_9DINO)

HSP 1 Score: 68.6 bits (166), Expect = 4.640e-9
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  526 RYKSSI--RMRSLGYVGPFLREYGSAARLLQGNV-GSSL----LLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDK-NARILVTSIRNQAVDAVSAKVS 930
            R+ S I  ++R+  + G +L  Y  A  LL   + G+ L    L K V  P R+       G++    A   L    +P+N  QR AV  L+  L++I GPPGTGKSTTI++++ +R+   ++  +VT + NQA+DAV  K++
Sbjct:   98 RFHSEIILKLRAHIFAGDYLNRYRCARELLNAGLNGTGLTDPQLEKAVLKPWRQ-----VPGTYTRRGA---LREDLMPINSDQRSAVQGLSSRLEVIHGPPGTGKSTTIFHMLSSRLPSMDSAAIVTCVTNQAIDAVVEKLA 232          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A813KLK7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KLK7_POLGL)

HSP 1 Score: 67.4 bits (163), Expect = 7.800e-9
Identity = 57/191 (29.84%), Postives = 82/191 (42.93%), Query Frame = 1
Query:  412 IVQIEGQALPALVVTCKCTSSYHRATLWMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAAR---LLQGNVGSSLL----LKTVSAPGRKKGCPSTEGSFVPAN---------AIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGF 936
            IV   G +    +  C+  S     TL    P           + +R + Y G  L   G       L  G+  S       LK   AP     CP  E + +            A  ++    +P+N  Q  AV+ +   ++II GPPGTGKSTTI+++I A +  +A  +VT I NQAVDAV+ K+  F
Sbjct:  130 IVSSAGGSTLFWITACQVASDTSATTLASRSPR----------VELRGMSYDGDALEHQGDLTLQPLLFAGDFASRFRAARELKVNMAP-----CPQLEQAILDPRTPVLGTYREAHLRMRQDLMPINPDQEAAVIGMRHRVEIIHGPPGTGKSTTIFHMISAHLPTSAAAVVTCICNQAVDAVAEKLKDF 305          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A813HVW6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HVW6_POLGL)

HSP 1 Score: 67.4 bits (163), Expect = 1.160e-8
Identity = 57/191 (29.84%), Postives = 82/191 (42.93%), Query Frame = 1
Query:  412 IVQIEGQALPALVVTCKCTSSYHRATLWMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAAR---LLQGNVGSSLL----LKTVSAPGRKKGCPSTEGSFVPAN---------AIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKVSGF 936
            IV   G +    +  C+  S     TL    P           + +R + Y G  L   G       L  G+  S       LK   AP     CP  E + +            A  ++    +P+N  Q  AV+ +   ++II GPPGTGKSTTI+++I A +  +A  +VT I NQAVDAV+ K+  F
Sbjct:  158 IVSSAGGSTLFWITACQVASDTSATTLASRSPR----------VELRGMSYDGDALEHQGDLTLQPLLFAGDFASRFRAARELKVNMAP-----CPQLEQAILDPRTPVLGTYREAHLRMRQDLMPINPDQEAAVIGMRHRVEIIHGPPGTGKSTTIFHMISAHLPTSAAAVVTCICNQAVDAVAEKLKDF 333          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: F2U1T9_SALR5 (C3H1-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1T9_SALR5)

HSP 1 Score: 66.6 bits (161), Expect = 1.970e-8
Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  562 YVGPFLREYGSAARLLQGNVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQAVDAVSAKV 927
            YVG  + +   A R L      S LL  V+ P ++   P    +F          +  VP+N AQ+ A+  L   ++ + GPPGTGKSTTIY+++ + +D +   +VT ++N+AV+AV+ K+
Sbjct:  177 YVGDIIAQ-AQACRALLERGEHSALLTAVADPSQRTVVPYNHRNF----------SEDVPINEAQQTALRALRYNVEAVRGPPGTGKSTTIYHLVKSVLDPSGITIVTCVQNKAVEAVAEKL 287          
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Match: A0A1Q9DNL4_SYMMI (Regulator of nonsense transcripts 1 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DNL4_SYMMI)

HSP 1 Score: 66.6 bits (161), Expect = 2.000e-8
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 1
Query:  541 IRMRSLGYVGPFLREYGSAARLLQG-NVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNVAQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKN----ARILVTSIRNQAVDAVSAKVS 930
            +++R+  + G ++  Y  A  LL G  +    L K V  P R+       G++    A   L    +P+N  QR AV  L+  L++I GPPGTGKSTTI++++ +R+          +VT + NQA+DAV  K++
Sbjct:  176 LKLRAHIFAGDYMNRYRCARELLNGVGLTDPQLEKAVLRPWRQ-----VPGTYTRPGA---LREDLMPINSDQRSAVHGLSSRLEVIHGPPGTGKSTTIFHMLSSRLPSMDAAATAAIVTCVTNQAIDAVVEKLA 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69770.14625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FY65_ECTSI3.970e-7446.75AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JRT8_9PHAE1.720e-3339.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6TVU4_CHLSO6.410e-3137.59DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3... [more]
E1ZLN5_CHLVA4.470e-2734.11Expressed protein n=1 Tax=Chlorella variabilis Tax... [more]
A0A812VWA8_9DINO7.330e-1035.97UPF1 protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A812Y2V5_9DINO4.640e-934.97Upf1 protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]
A0A813KLK7_POLGL7.800e-929.84Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813HVW6_POLGL1.160e-829.84Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
F2U1T9_SALR51.970e-833.61C3H1-type domain-containing protein n=1 Tax=Salpin... [more]
A0A1Q9DNL4_SYMMI2.000e-833.33Regulator of nonsense transcripts 1 n=3 Tax=Symbio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69770contigH-elongata_contig69770:1093..2770 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.2
Seed ortholog evalue8.1e-65
Seed eggNOG ortholog2880.D7FY65
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
EggNOG OGsCOG1112@1,KOG1802@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-24_003640.1
Exons3
Model size972
Cds size972
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69770.14625.1prot_H-elongata_contig69770.14625.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig69770 1093..2770 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931095.1564476-CDS-H-elongata_contig69770:1092..12751622931095.1564476-CDS-H-elongata_contig69770:1092..1275Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69770 1093..1275 +
1691679695.8129244-CDS-H-elongata_contig69770:1092..12751691679695.8129244-CDS-H-elongata_contig69770:1092..1275Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69770 1093..1275 +
1622931095.1710844-CDS-H-elongata_contig69770:1829..24571622931095.1710844-CDS-H-elongata_contig69770:1829..2457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69770 1830..2457 +
1691679695.826252-CDS-H-elongata_contig69770:1829..24571691679695.826252-CDS-H-elongata_contig69770:1829..2457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69770 1830..2457 +
1622931095.1917694-CDS-H-elongata_contig69770:2609..27701622931095.1917694-CDS-H-elongata_contig69770:2609..2770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69770 2610..2770 +
1691679695.8371031-CDS-H-elongata_contig69770:2609..27701691679695.8371031-CDS-H-elongata_contig69770:2609..2770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69770 2610..2770 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig69770.14625.1

>prot_H-elongata_contig69770.14625.1 ID=prot_H-elongata_contig69770.14625.1|Name=mRNA_H-elongata_contig69770.14625.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
DLSASFERLSLAKSDVTIPLLTSYASLSGVSIAGPCVKVGEFVPKANPIP
DSYGSTRDYLKAMQAHTQVEFTASIKEGVASAHRKEGGGWISCTCKCGRD
CTGPTHVFDLNGTPHPNNDFGSCDDGHNFNNETWARHIVQIEGQALPALV
VTCKCTSSYHRATLWMSLPEGVTCARYKSSIRMRSLGYVGPFLREYGSAA
RLLQGNVGSSLLLKTVSAPGRKKGCPSTEGSFVPANAIDKLEASQVPLNV
AQRDAVLNLTGGLDIIVGPPGTGKSTTIYYIIDARVDKNARILVTSIRNQ
AVDAVSAKVSGFGVLVSSFHRMR*
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mRNA from alignment at H-elongata_contig69770:1093..2770+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig69770.14625.1 ID=mRNA_H-elongata_contig69770.14625.1|Name=mRNA_H-elongata_contig69770.14625.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1678bp|location=Sequence derived from alignment at H-elongata_contig69770:1093..2770+ (Himanthalia elongata Himel1 dioecious)
GATCTCTCCGCTTCCTTTGAGCGACTATCTTTGGCGAAATCGGATGTAAC AATTCCACTTTTGACTTCGTACGCTTCCCTATCTGGGGTATCGATAGCCG GCCCATGTGTCAAGGTTGGCGAATTTGTGCCCAAGGCTAATCCCATCCCG GACAGCTATGGTTCGACACGGGATTACCTCAAGGTAAGCATGACATAACC TGATTCAAACAAATGTTGTAGCATTACGTCACACTACTGTTGGATGACTG GGATAGATGTACTACTCTTCTGACCTTTCTGGGTAGAGCCTAATTTATTA TCAGGCTGAAGGTGCTTTTTCAAAGGACCTCTTATAGAAACGATAGAAGT TGTGAAATGGATAAAAATATATATATATCTAAACATATCAAATCATTTAA AATCCTCCAAACATAGATCGACACCTTCTTTACACCATGTGAGGTGAAAT TTGAAAATATCTTCTACATGGAGTGTGATTTTTTTCTTACAATATATCGA TCAGCATAAAGTCGTCACTTGCGATTACCGTAATCGGGTTCCCCAAAGAC GATTGCATCGGATCAAATATTTAAATAAAAAATATTATTAACTCTAACTC TAACTCTAACTCTAACTCTAACTTGGCTATTGTTCGTAAAGAAAACTATC TGGTACGGGAAGAGAAAATACAACGTGCCTGAAGTCGTTCTTTCTACTCG CGCCGCTCCGCCCCTCCGCCGCACCCCCACGTTATAGGCAATGCAAGCCC ACACGCAGGTGGAATTCACCGCTTCGATCAAGGAGGGCGTCGCCTCGGCT CATCGTAAGGAGGGAGGTGGATGGATTTCTTGCACCTGCAAGTGTGGTCG CGATTGCACAGGACCCACCCATGTTTTCGACTTGAACGGGACTCCCCATC CCAATAATGATTTCGGTTCTTGTGACGATGGACACAACTTCAACAATGAG ACTTGGGCACGCCACATAGTGCAGATCGAAGGACAAGCCCTGCCCGCCCT AGTTGTGACATGTAAGTGTACGTCAAGCTACCACAGAGCAACTCTGTGGA TGTCACTACCTGAAGGAGTTACTTGTGCCCGCTACAAGTCAAGCATTCGA ATGCGCTCCCTTGGATACGTTGGTCCTTTCCTACGCGAGTATGGCAGCGC CGCTCGTCTCCTTCAAGGTAACGTAGGGAGCAGCCTGTTATTGAAGACGG TGTCCGCGCCGGGTCGAAAGAAGGGGTGTCCTTCAACGGAAGGATCATTC GTACCAGCTAATGCTATCGACAAACTTGAGGCCTCACAGGTTCCCCTTAA CGTCGCACAGAGAGATGCGGTCCTGAATCTCACTGGTGGCCTCGACATCA TTGTCGGACCCCCGGGTAAGTGGCGATGATGATACTATCGATTCGTAGGT TTAATGTATAATGGCCCTCTTTTCGCTTGGCCCCCTCGTACCACATCTTC ACAGACTATCCAAGCAAAGCTTTAATTCTAAACTTATTCGGTTCGCCCTC ATTTTAAACCACCTCAGGTACGGGCAAGTCTACCACCATTTATTATATAA TCGACGCACGAGTGGACAAGAATGCGCGTATCCTCGTGACGTCCATTCGC AATCAAGCAGTCGATGCAGTGTCGGCAAAGGTGTCTGGATTCGGAGTTTT GGTGAGCTCATTTCATCGTATGAGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig69770:1093..2770+

>mRNA_H-elongata_contig69770.14625.1 ID=mRNA_H-elongata_contig69770.14625.1|Name=mRNA_H-elongata_contig69770.14625.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig69770:1093..2770+ (Himanthalia elongata Himel1 dioecious)
GATCTCTCCGCTTCCTTTGAGCGACTATCTTTGGCGAAATCGGATGTAAC
AATTCCACTTTTGACTTCGTACGCTTCCCTATCTGGGGTATCGATAGCCG
GCCCATGTGTCAAGGTTGGCGAATTTGTGCCCAAGGCTAATCCCATCCCG
GACAGCTATGGTTCGACACGGGATTACCTCAAGGATCTCTCCGCTTCCTT
TGAGCGACTATCTTTGGCGAAATCGGATGTAACAATTCCACTTTTGACTT
CGTACGCTTCCCTATCTGGGGTATCGATAGCCGGCCCATGTGTCAAGGTT
GGCGAATTTGTGCCCAAGGCTAATCCCATCCCGGACAGCTATGGTTCGAC
ACGGGATTACCTCAAGGCAATGCAAGCCCACACGCAGGTGGAATTCACCG
CTTCGATCAAGGAGGGCGTCGCCTCGGCTCATCGTAAGGAGGGAGGTGGA
TGGATTTCTTGCACCTGCAAGTGTGGTCGCGATTGCACAGGACCCACCCA
TGTTTTCGACTTGAACGGGACTCCCCATCCCAATAATGATTTCGGTTCTT
GTGACGATGGACACAACTTCAACAATGAGACTTGGGCACGCCACATAGTG
CAGATCGAAGGACAAGCCCTGCCCGCCCTAGTTGTGACATGTAAGTGTAC
GTCAAGCTACCACAGAGCAACTCTGTGGATGTCACTACCTGAAGGAGTTA
CTTGTGCCCGCTACAAGTCAAGCATTCGAATGCGCTCCCTTGGATACGTT
GGTCCTTTCCTACGCGAGTATGGCAGCGCCGCTCGTCTCCTTCAAGGTAA
CGTAGGGAGCAGCCTGTTATTGAAGACGGTGTCCGCGCCGGGTCGAAAGA
AGGGGTGTCCTTCAACGGAAGGATCATTCGTACCAGCTAATGCTATCGAC
AAACTTGAGGCCTCACAGGTTCCCCTTAACGTCGCACAGAGAGATGCGGT
CCTGAATCTCACTGGTGGCCTCGACATCATTGTCGGACCCCCGGGCAATG
CAAGCCCACACGCAGGTGGAATTCACCGCTTCGATCAAGGAGGGCGTCGC
CTCGGCTCATCGTAAGGAGGGAGGTGGATGGATTTCTTGCACCTGCAAGT
GTGGTCGCGATTGCACAGGACCCACCCATGTTTTCGACTTGAACGGGACT
CCCCATCCCAATAATGATTTCGGTTCTTGTGACGATGGACACAACTTCAA
CAATGAGACTTGGGCACGCCACATAGTGCAGATCGAAGGACAAGCCCTGC
CCGCCCTAGTTGTGACATGTAAGTGTACGTCAAGCTACCACAGAGCAACT
CTGTGGATGTCACTACCTGAAGGAGTTACTTGTGCCCGCTACAAGTCAAG
CATTCGAATGCGCTCCCTTGGATACGTTGGTCCTTTCCTACGCGAGTATG
GCAGCGCCGCTCGTCTCCTTCAAGGTAACGTAGGGAGCAGCCTGTTATTG
AAGACGGTGTCCGCGCCGGGTCGAAAGAAGGGGTGTCCTTCAACGGAAGG
ATCATTCGTACCAGCTAATGCTATCGACAAACTTGAGGCCTCACAGGTTC
CCCTTAACGTCGCACAGAGAGATGCGGTCCTGAATCTCACTGGTGGCCTC
GACATCATTGTCGGACCCCCGGGTACGGGCAAGTCTACCACCATTTATTA
TATAATCGACGCACGAGTGGACAAGAATGCGCGTATCCTCGTGACGTCCA
TTCGCAATCAAGCAGTCGATGCAGTGTCGGCAAAGGTGTCTGGATTCGGA
GTTTTGGTGAGCTCATTTCATCGTATGAGGTAAGTACGGGCAAGTCTACC
ACCATTTATTATATAATCGACGCACGAGTGGACAAGAATGCGCGTATCCT
CGTGACGTCCATTCGCAATCAAGCAGTCGATGCAGTGTCGGCAAAGGTGT
CTGGATTCGGAGTTTTGGTGAGCTCATTTCATCGTATGAGGTAA
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