prot_H-elongata_contig69488.14598.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69488.14598.1
Unique Nameprot_H-elongata_contig69488.14598.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
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BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: D8LPS4_ECTSI (Dolichyl-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-dolichol alpha-1,2-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPS4_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 3.990e-6
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    3 SRLLERKTSLWVLTYSAAVALVLVPSPLLEPRWEIM 38
            SRLL RK  LWVLTY  A A+VLVPSPLLEPR+  M
Sbjct:  518 SRLLRRKPPLWVLTYVGAAAVVLVPSPLLEPRYLTM 553
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPS4_ECTSI3.990e-672.22Dolichyl-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-dolichol a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016900Alpha-2-glucosyltransferase Alg10PFAMPF04922DIE2_ALG10coord: 2..37
e-value: 4.0E-5
score: 23.1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69488contigH-elongata_contig69488:2686..2814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69488.14598.1mRNA_H-elongata_contig69488.14598.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69488 352..2814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69488.14598.1 ID=prot_H-elongata_contig69488.14598.1|Name=mRNA_H-elongata_contig69488.14598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MLSRLLERKTSLWVLTYSAAVALVLVPSPLLEPRWEIMTVSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016900Alg10