mRNA_H-elongata_contig69488.14598.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: D8LPS4_ECTSI (Dolichyl-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-dolichol alpha-1,2-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPS4_ECTSI) HSP 1 Score: 333 bits (854), Expect = 3.340e-104 Identity = 211/460 (45.87%), Postives = 250/460 (54.35%), Query Frame = 1
Query: 1 GQWDPKITTPPGLYVFGLVYARFV-----------GYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGKAMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPPRGGTWWRRSGSALAGTAAVLFRQTNAVWVAFTLAVCLLEDFAP-LVRLDRPVGGADTSAEDAGTDCAMGTKSWRLIGGGNTS-----------------LGSDSGSRLLGGCDVGNSAASLT-------------------------RKRKSSSSGDPSSL-VPRG-----------GGTEPGGYDSVIRGKRLRKGEGYEDRTSPENAPFPPLPNLLLRFIRAALDDAYRGAPLLRCRVPLGLPVVLFVIFVWGFNDGAVVLGDKENHSPGGPPHLAQVAYLSAVGASLWGLVG-REAAVAAEARKGFVRWVVNRGLIGVAATVGAVAFAL 1179
G WDPKITTPPGLY F + YA + G + R +G + ++C A VLR NWGLS+G + VMR++ RRM GKA+AHA+LLW+YPVSFFFSFL YTD GATFFV LCYLL+TGPPRGG W RR SALAG +VLFRQTNAVWVAFTLA CLL+DF P +V R G D SA A+ S R T G + + +GG D G +KR S S + + + RG G GG ++ I + R G + PP P LLL RAAL DA RG LLR R PL +PV LF +FVWGFN GAVV+GDKENHSPGGPPHLAQ+AYL+A GASLWG+VG REA + +AR+GF RW G VA V VA L
Sbjct: 20 GTWDPKITTPPGLYAFAVAYAGLLTALREALLLLQGTATASSRVAGLFISQEQCVAAVLRQANWGLSLGALAVMRSLFVRRMAPGKALAHALLLWLYPVSFFFSFLLYTDTGATFFVLLCYLLATGPPRGGGWGRRLASALAGGVSVLFRQTNAVWVAFTLAACLLDDFTPSVVAAVRVSPGGDVSARAPAGALAVEPSSRRARDAAGTGSRLKSAGSWEHPLAPPCAGDGAAAEAVGGLDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQKRVGSGSQQDAEVGLSRGXXXXXXXLGTDGEQTTGGSNNDIDSAQPRNGGAHPS--------LPPTPRLLLGLARAALTDASRGGTLLRARAPLAIPVALFAVFVWGFNGGAVVIGDKENHSPGGPPHLAQLAYLAATGASLWGVVGGREALLGRDARRGFARWA-GGGRGRVATVVAGVAAVL 470
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A813EN98_POLGL (Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EN98_POLGL) HSP 1 Score: 134 bits (337), Expect = 1.150e-30 Identity = 126/398 (31.66%), Postives = 174/398 (43.72%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGKAMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPPRGG---TWWRRSGSALAGTAAVLFRQTNAVWVAFTLAVCLLEDFAPLVRLDRPVGGADTSAEDAGTDCAMGTKSWRLIGGGNTSLGSDSGSRLLGGCDVGNSAASLTRKRKSSSSGDPSSLVPRGGGTEPGGYDSVIRGKRLRKGEGYEDRTSPENAPFPPLPNLLLRFIRAALDDAYRGAPLLRCRVPLGLPVVLFVIFVWGFNDGAVVLGDKENHSPGGPPHLAQVAYLSAVGASLWGLVGREAAVAAEARKGF--VRWVVNRGLIGVAATVGAVAFALH 1182
+WD KITT PGLYVF A++ R S P FGGQ C LR N LS+G ++ +L RR+P KA A A+ L +YP+ FF +F+YYTD G+ F+ L + L+T P RG T R +A+AG A+LFRQTNAVW+ F+ L D T W +RG+ L P+LL F +A L ++ R L+ PL +PV+LFV FV ++G++V+GDK NH H AQ+AYLSAV A++WGLVG +AAV+A + + F R+ R ++ A + + F LH
Sbjct: 52 EWDEKITTFPGLYVFS----------AALSRVSRP-FGGQLCSPARLRADNALLSLGVQVLLYRLLRRRLPPAKAAAQALALSLYPIHFFCAFIYYTDVGSLFWALLVHDLAT-PSRGRALPTSGRIVLAAVAGLVAILFRQTNAVWMMFSFGTAALGDL-------------------------QSTHKW----------------------------------------------------------GPQLRGEELT-------------------PSLLFTFAKALLLESRR---LVFRLGPLLIPVLLFVAFV--VHNGSIVVGDKSNHEAS--VHWAQLAYLSAVTAAMWGLVGPDAAVSAGSLRAFCKARFGSLRAVLLTAVALCLLVFVLH 328
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A835Z5I3_9STRA (Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I3_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.850e-24 Identity = 74/174 (42.53%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGKAMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPP-----RGGTWWRRSGSALAGTAAVLFRQTNAVWVAFTLAVCLLEDF---APLVRLDRP 501
+WDPKITT PGLY+ F V+R C AV LR +N S+ T+ VM A+L RRM +A AHA +W+YP SFFF+FL+YTDPG+TFFV L WR +AL A++FRQTNAVW AF L LL+ +PL L P
Sbjct: 56 EWDPKITTLPGLYIVASTT------FVPVLRLITD----HACEAVPLRLLNAVFSLITMAVMVALLRRRMGFNQAAAHAATMWLYPSSFFFTFLFYTDPGSTFFVLATIWLVQEAAFETAVLASPGWRVFAAALTSAGAIMFRQTNAVWCAFILGTALLQQLQALSPLTLLTVP 219
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: D0P4R1_PHYIT (Dolichyl-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-dolichol alpha-1,2-glucosyltransferase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P4R1_PHYIT) HSP 1 Score: 97.4 bits (241), Expect = 2.410e-19 Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGK-AMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTG------PPRGGTWWRRSGSALAGTAAVLFRQTNAVWVAF 444
+WDPKITT PGLY+ +YA+ F + C VLR+VN +VG + + +I P A+ HA+ + ++P FFF+FL+YTD GATFFV L LL+ PP G++ SAL+G AVLFRQTN VWV F
Sbjct: 66 EWDPKITTFPGLYLVSTLYAKLASTFNT----------DDFCSVAVLRSVNVLFAVGNVVLCASIRHHVAPQDPHALLHALRIAVFPPLFFFTFLFYTDGGATFFVLLMALLAERVDLLQYPPARGSFML---SALSGAVAVLFRQTNIVWVVF 206
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A8K1CCJ0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCJ0_PYTOL) HSP 1 Score: 100 bits (248), Expect = 7.050e-19 Identity = 66/165 (40.00%), Postives = 84/165 (50.91%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFG----GQECGAVVLRNVNWGLSVGTIGVMRAILARRMPA-GKAMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPPRGGTWWRRSG------SALAGTAAVLFRQTNAVWVAFTLAVCLL 465
+WDPKITT PG+Y G+ +AR W G G C VLR+VN + G ++ + MP + HA+++ +PV FFFSF+YYTD GA FFV L Y L+ R R SA+AG AAVLFRQTN VWV F L+
Sbjct: 49 EWDPKITTFPGVYFVGVAFARLY-----------QWLGLSDTGSFCSISVLRSVNVAFAAGNTWLIIRLRQLLMPTDSNLLLHALMITAFPVQFFFSFVYYTDAGAVFFVLLMYFLAL---RANLVVRPVSPVGLITSAMAGAAAVLFRQTNIVWVLFVAGTTLV 199
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A1S3JEU2_LINUN (Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JEU2_LINUN) HSP 1 Score: 98.6 bits (244), Expect = 2.260e-18 Identity = 61/157 (38.85%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGK------AMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPPRGGTWWRRSGSALAGTAAVLFRQTNAVWVAFTLAV 456
+WDPKITT PGLY+ L + VG+ W C + LR +N S+G + A++ + K A+ AV+L ++PV +FF+FLYYTDPG+TFF L YLLS +A+ G A+LFRQTN +WVAF V
Sbjct: 58 EWDPKITTFPGLYLISLGVLKPVGWLMG-------WDEDTTCSVLNLRAINIMFSIGNFYLFLALIRKIHGKDKNYQDTVAVVTAVVLSLFPVMYFFTFLYYTDPGSTFFTLLMYLLSLHD-------NHKVAAMMGLVAILFRQTNVIWVAFVAGV 200
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A6A3W7K7_9STRA (Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3W7K7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.510e-18 Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGK---AMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTG------PPRGGTWWRRSGSALAGTAAVLFRQTNAVWVAF 444
+WDPKITT PGLY+ +YA+ +S FG C VLR+VN +VG +G+ +L RR A + A+ HA+ + ++P FFF+FL+YTD GATFFV L LL+ PP G++ SA++G AVLFRQTN VWV F
Sbjct: 69 EWDPKITTFPGLYLASTLYAK---------AASTLGFG-AFCSVSVLRSVNVMFAVGNVGL--CVLLRRHVAPRDPNALLHALRVAVFPPLFFFAFLFYTDGGATFFVLLMALLAEKVDLLQYPPARGSFML---SAMSGAVAVLFRQTNIVWVVF 209
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A812X0B1_SYMPI (Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812X0B1_SYMPI) HSP 1 Score: 97.4 bits (241), Expect = 3.770e-18 Identity = 67/159 (42.14%), Postives = 86/159 (54.09%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGKAMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPPRGGTW---WRRSGSALAGTAAVLFRQTNAVWVAFTLAVCLLED 471
+WDPKITT PGLYV + R VG SG F CG +LR N +G V +L RR+ KA A +++L +YP+ FF+ LYYTD G+ F+V L + T P RG WR + A G AVLFRQTNAVW+ F+ L+D
Sbjct: 20 EWDPKITTFPGLYVSSCLL-RGVGL-------SGMGF----CGKDMLRLDNAFFGLGVHAVSYRLLRRRLDPSKAAAQSLMLSLYPIHFFYQLLYYTDVGSLFWVLLVQDIVT-PGRGQALPGPWRIAVGAATGAVAVLFRQTNAVWLMFSFGTAALQD 165
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: G7L3H5_MEDTR (Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase n=6 Tax=IRL clade TaxID=2233839 RepID=G7L3H5_MEDTR) HSP 1 Score: 97.8 bits (242), Expect = 4.880e-18 Identity = 71/195 (36.41%), Postives = 97/195 (49.74%), Query Frame = 1
Query: 1 GQWDPKITTPPGLYVFGLVY--ARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPA---GKAMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLLSTGPPRGGTWWRRSGSALAGTAAVLFRQTNAVWVAFTLAVCLLEDFAPLVRLDRPVGGADTSAEDAGTD----CAMGT 558
G WDP ITTPPGLY L + + F G+F SS C A +LR++N L+V ++ I+ P KAM HAV+L +YP+ +FF+FLYYTD + V YL S +W SAL G AV+ RQTN +WV F + +++ + L G A T+ D + CA GT
Sbjct: 48 GSWDPMITTPPGLYYLSLAHIASLFPGFFCVEASSSFT----DMCSAAILRSINGVLAVICSIILYDIIIHLKPTLGDRKAMLHAVVLSLYPLHWFFTFLYYTDVASVTAVLAMYLASLKK----NYWL---SALVGAFAVVVRQTNIIWVLFVACIGIID-----MSLMHGKGNAKTAKSDVSIEHDFTCATGT 226
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Match: A0A2D4BSI3_PYTIN (Dolichyl-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-dolichol alpha-1,2-glucosyltransferase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSI3_PYTIN) HSP 1 Score: 96.7 bits (239), Expect = 6.870e-18 Identity = 66/157 (42.04%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 4 QWDPKITTPPGLYVFGLVYARFVGYFASVVRSSGPWFGGQECGAVVLRNVNWGLSVGTIGVMRAILARRMPAGK-AMAHAVLLWMYPVSFFFSFLYYTDPGATFFVFLCYLL---------STGPPRGGTWWRRSGSALAGTAAVLFRQTNAVWVAF 444
+WDPKITT PG+YV A V + +S P C +LR VN ++G ++ + +P+ + ++ HA + +PVSFFFSFL+YTD GATFFV L YLL ST P R SA+AG+ AVLFRQTN VWV F
Sbjct: 56 EWDPKITTFPGVYVVATALAHAVRWLSSAPADD-PTI---VCSTALLRGVNVLFAMGNAWLLVRLRTMIVPSDRNSLLHAWTIIAFPVSFFFSFLFYTDMGATFFVLLMYLLALPTSTHVESTSPIR------FLPSAIAGSLAVLFRQTNIVWVVF 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69488.14598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69488.14598.1 >prot_H-elongata_contig69488.14598.1 ID=prot_H-elongata_contig69488.14598.1|Name=mRNA_H-elongata_contig69488.14598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp MLSRLLERKTSLWVLTYSAAVALVLVPSPLLEPRWEIMTVSG*back to top mRNA from alignment at H-elongata_contig69488:352..2814+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69488.14598.1 ID=mRNA_H-elongata_contig69488.14598.1|Name=mRNA_H-elongata_contig69488.14598.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2463bp|location=Sequence derived from alignment at H-elongata_contig69488:352..2814+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69488:352..2814+ >mRNA_H-elongata_contig69488.14598.1 ID=mRNA_H-elongata_contig69488.14598.1|Name=mRNA_H-elongata_contig69488.14598.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=258bp|location=Sequence derived from alignment at H-elongata_contig69488:352..2814+ (Himanthalia elongata Himel1 dioecious)back to top |