prot_H-elongata_contig118857.1458.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118857.1458.1
Unique Nameprot_H-elongata_contig118857.1458.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: D7FUP3_ECTSI (Proline--tRNA ligase, central part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP3_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 1.220e-64
Identity = 108/142 (76.06%), Postives = 120/142 (84.51%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
            R+ + LP      +  +RFAGA+ETYTIEALMQNGWALQSGTSHFLGQNFARAF+VYYQT +E RELVWATSWGVTTRL+GAM+MTHSDD GLRLPPAVAPKQ  VVIVPITKG GED DLV +AVD    +LKAAG+RVKV
Sbjct:  288 RETLALPTVMGVKSPKERFAGADETYTIEALMQNGWALQSGTSHFLGQNFARAFEVYYQTPDEKRELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQ--VVIVPITKGPGEDTDLVNKAVDGVVDQLKAAGVRVKV 427          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A835Z2K2_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K2_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.430e-60
Identity = 105/144 (72.92%), Postives = 119/144 (82.64%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLR--LPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
            +D++ LP      + M+RFAGAEET+TIE +MQNGWALQSGTSHFLGQNFARAFDVY+QTK E RELVWATSWGV+TRL+GA++MTHSDD GLR  LPPAVAP Q  VVIVPITKG GED DLV   VD A A+LKA G+RVKV
Sbjct:  341 KDMLALPVVKGTKSPMERFAGAEETFTIEGMMQNGWALQSGTSHFLGQNFARAFDVYFQTKNEDRELVWATSWGVSTRLMGALVMTHSDDAGLRQQLPPAVAPHQ--VVIVPITKGQGEDTDLVNSFVDTAVAQLKAQGIRVKV 482          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A7S3XX04_HETAK (Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX04_HETAK)

HSP 1 Score: 189 bits (480), Expect = 4.750e-54
Identity = 98/142 (69.01%), Postives = 113/142 (79.58%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
            R ++ +P      +  +RFAGAEET+TIEALMQNGWALQSGTSHFLGQNFARAFDV++QT E  RELVWATSWGV+TRL+GA++MTHSDD GL LPP VAP QA  VIVPITKG GE+  LV   VD   A+LK AG+RVKV
Sbjct:  356 RRVLAVPVVKGVKSPSERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTAEGGRELVWATSWGVSTRLLGALVMTHSDDAGLVLPPPVAPVQA--VIVPITKGEGEETALVRRHVDRMVAQLKRAGVRVKV 495          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A7S0W9N9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W9N9_9CRYP)

HSP 1 Score: 171 bits (434), Expect = 3.130e-52
Identity = 88/142 (61.97%), Postives = 108/142 (76.06%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
            RD + +P      +  +RFAGA++T+TIEALMQNGWALQSGTSHFLGQNFARAFDV +Q K++  ELVWATSWGV+TRL+GA++MTHSDD GL LPP VAP Q  VVIVP+ +G  E+ D V   +    A+LKA G+R KV
Sbjct:    5 RDYLAVPVVKGTKSPSERFAGADDTFTIEALMQNGWALQSGTSHFLGQNFARAFDVTFQNKDQKNELVWATSWGVSTRLLGALVMTHSDDQGLVLPPMVAPVQ--VVIVPVGRGKKENDDKVDAFLAPVEAQLKARGIRYKV 144          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A7R9U9E9_9STRA (Proline--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9E9_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.200e-51
Identity = 98/144 (68.06%), Postives = 112/144 (77.78%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVM--DRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
            +DL+ +P   I GT    +RFAGA+ETYTIEALMQNGWALQSGTSHFLGQNFA+AFDV +Q KE  RELVWATSWGV+TRLIGA++MTHSDD GL LPP VAP Q  VV+VP+ K   EDA  V EAVD    EL+A G+RV V
Sbjct:  272 QDLLAVP--VIKGTKSPSERFAGADETYTIEALMQNGWALQSGTSHFLGQNFAKAFDVLFQNKEGKRELVWATSWGVSTRLIGALVMTHSDDQGLVLPPKVAPIQ--VVVVPVGKPGTEDAQKVSEAVDKLVDELQAKGVRVHV 411          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A7S0XC80_9STRA (Proline--tRNA ligase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XC80_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.560e-51
Identity = 92/142 (64.79%), Postives = 111/142 (78.17%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
             +++ +P      +  +RFAGA++TYTIEALMQNGWALQSGTSHFLGQNFA+AFDVYYQT   +RELVWATSWGV+TRLIGA++MTHSDD GL LPP VAP Q  VVIVPITKGS E++  V +  +     LK+ G+RVKV
Sbjct:  163 EEILAMPVIKGRKSPSERFAGADDTYTIEALMQNGWALQSGTSHFLGQNFAKAFDVYYQTVSGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPKVAPIQ--VVIVPITKGSNEESVKVIDKANEIMKHLKSRGIRVKV 302          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A7S2SII9_9STRA (Proline--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SII9_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.250e-50
Identity = 92/142 (64.79%), Postives = 110/142 (77.46%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKV 142
             D++ +P      +  +RFAGA+ET+TIEALMQNGWALQSGTSHFLGQNFARAFDV +Q+++  RELVWATSWGV+TRL+GAM+MTH+DD GL LPPAVAP Q  VVIVPI   + ED   V  A+D   AELKA  +RVKV
Sbjct:  284 EDMLAVPVVKGVKSASERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVEFQSRDGKRELVWATSWGVSTRLVGAMVMTHADDAGLVLPPAVAPVQ--VVIVPILGKTPEDRQAVESAIDDVLAELKAENVRVKV 423          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A8J2SB38_9STRA (Proline--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB38_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.340e-48
Identity = 88/132 (66.67%), Postives = 104/132 (78.79%), Query Frame = 0
Query:   14 TVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDAD---LVGEAVDAAAAELKAAGMRVKV 142
            + ++RFAGA+ETYTIEALM NGWALQSGTSHFLGQNFARAFDVYYQ KE  R+LVWATSWGV+TRL+GA++MTHSDD GL LPP +AP Q  V +VPI KG+ +D +    V   VD    E +A G+RVKV
Sbjct:  274 SAIERFAGADETYTIEALMPNGWALQSGTSHFLGQNFARAFDVYYQNKEAKRDLVWATSWGVSTRLLGALVMTHSDDAGLVLPPRIAPVQ--VALVPIVKGAEKDPEGTQTVMSLVDKVVDECEALGLRVKV 403          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: W7TTB8_9STRA (Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTB8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.730e-48
Identity = 92/143 (64.34%), Postives = 111/143 (77.62%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSG-EDADLVGEAVDAAAAELKAAGMRVKV 142
            RD++ LP      +  +RFAGAEET+TIEALMQNGWALQSGTSHFLGQNFARAFDV +QT E +RELVWATSWGV+TRLIGA++MTHSDD GL LPP+VAP Q  VV+VPI KG+G E+ D     ++  A+ L+   +RV V
Sbjct:  383 RDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQ--VVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHV 523          
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Match: A0A7S2HWK4_9EUKA (Proline--tRNA ligase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HWK4_9EUKA)

HSP 1 Score: 169 bits (427), Expect = 1.230e-47
Identity = 91/147 (61.90%), Postives = 110/147 (74.83%), Query Frame = 0
Query:    1 RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNFARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVAPKQASVVIVPITKGSGEDADLVGEA-----VDAAAAELKAAGMRVKV 142
            RD++ +P      +  ++FAGA+ETYTIEALMQNGWALQS TSHFLGQNFARAFDVY+QT E ++ELVWATSWG +TRLIG ++MTHSDD GL LPPAVAP+Q  VV VPI+   G + D  G A     V+ AAA L+  G+RV V
Sbjct:  167 RDVLAMPVIKGMKSPTEKFAGADETYTIEALMQNGWALQSATSHFLGQNFARAFDVYFQTAENTQELVWATSWGASTRLIGGLVMTHSDDQGLVLPPAVAPQQ--VVFVPISP-KGPEKDPEGHAKLMTFVNEAAASLRNTGVRVHV 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118857.1458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP3_ECTSI1.220e-6476.06Proline--tRNA ligase, central part n=1 Tax=Ectocar... [more]
A0A835Z2K2_9STRA4.430e-6072.92Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3XX04_HETAK4.750e-5469.01Proline--tRNA ligase n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S0W9N9_9CRYP3.130e-5261.97Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7R9U9E9_9STRA1.200e-5168.06Proline--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0XC80_9STRA3.560e-5164.79Proline--tRNA ligase (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2SII9_9STRA1.250e-5064.79Proline--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SB38_9STRA1.340e-4866.67Proline--tRNA ligase n=1 Tax=Pelagomonas calceolat... [more]
W7TTB8_9STRA1.730e-4864.34Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S2HWK4_9EUKA1.230e-4761.90Proline--tRNA ligase n=1 Tax=Haptolina brevifila T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 90..143
e-value: 3.8E-5
score: 25.3
NoneNo IPR availableGENE3D3.30.930.10coord: 4..89
e-value: 1.5E-22
score: 82.2
NoneNo IPR availablePANTHERPTHR43382:SF3PROLINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 16..142
NoneNo IPR availablePANTHERPTHR43382FAMILY NOT NAMEDcoord: 16..142
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 7..90
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 92..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118857contigH-elongata_contig118857:238..1999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118857.1458.1mRNA_H-elongata_contig118857.1458.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118857 238..1999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118857.1458.1 ID=prot_H-elongata_contig118857.1458.1|Name=mRNA_H-elongata_contig118857.1458.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
RDLILLPPWAIYGTVMDRFAGAEETYTIEALMQNGWALQSGTSHFLGQNF
ARAFDVYYQTKEESRELVWATSWGVTTRLIGAMIMTHSDDLGLRLPPAVA
PKQASVVIVPITKGSGEDADLVGEAVDAAAAELKAAGMRVKVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036621Anticodon-bd_dom_sf