mRNA_H-elongata_contig69291.14576.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A6H5L877_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L877_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.240e-54 Identity = 110/233 (47.21%), Postives = 147/233 (63.09%), Query Frame = 2
Query: 380 PAEPNPIHVALTLSHALALCS***DDTVYLLTKYVDG---GEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEEYRRLQSLPDGRKAKSSYCSPETFK-EKAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAWFA 1066
P PN + +A L D TVYL+T +V G GEMF+ ++ D A + L RQ+++G +Y HSKGICHADMSLEN LV+ T+A+IID+GM+ MP +E +R S+PDGR+AK SYC PET+K + YDGVKVDVF+ G M FMM TG PF ASRLDRKF+ +V G+++ + + +P +Q LL GMM+Y P+ R LP +VL + WFA
Sbjct: 105 PGHPNVVGLAAALED---------DTTVYLVTPFVGGVGSGEMFD-WVADNYQNPAPEATIMPLLRQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMAQQMPTNEHGQRFMSVPDGRRAKRSYCPPETYKGREPYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRRVVFHGDLQGYLADYGMPPLP--DQVFGLLQGMMSYRPEDRPLPVEVLENPWFA 325
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: D8LHX1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX1_ECTSI) HSP 1 Score: 194 bits (493), Expect = 6.070e-53 Identity = 106/233 (45.49%), Postives = 146/233 (62.66%), Query Frame = 2
Query: 380 PAEPNPIHVALTLSHALALCS***DDTVYLLTKYVDG---GEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEEYRRLQSLPDGRKAKSSYCSPETFK-EKAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAWFA 1066
P PN + +A L D TVYL+T +V G GEMF+ ++ D A + L Q+++G +Y HSKGICHADMSLEN LV+ T+A++ID+GM+L MP DE +R S+PD R+AK SYC PET+K + YDGVKVD+F+ G M FM+ TG PF ASRLDRKF+ +V +G+++ + + L+P + +LL MM+Y P+ R LP +VL WFA
Sbjct: 102 PGHPNVVGLAAALQD---------DTTVYLVTPFVGGVGSGEMFD-WVADNYQNPAPEATIMPLLYQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFMIDFGMALQMPTDEAGQRFMSVPDRRRAKRSYCPPETYKGRQPYDGVKVDMFSVGCMGFMLFTGIPPFDYASRLDRKFRKVVFQGDLQGYLADYEMPLLP--DPVFQLLRRMMSYQPENRPLPVEVLEDPWFA 322
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S2UUC5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUC5_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.430e-28 Identity = 75/205 (36.59%), Postives = 117/205 (57.07%), Query Frame = 2
Query: 452 DDTVYLLTKYVDGGEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEEY-RRLQSLPDGRKAKSSYCSPETFKEKA-YDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAW 1060
+D VY + Y G E+F+ + GAF R R FR+++ G Y HS+G+CH D+SLENVLV ++ IID GM L MP+D+ + L P G+ K +Y SPE F K + G +D +A G +LF+MLTG PF A+ +D +F++ + + E + + L P +A +LL M+ +P++RL ++++ H W
Sbjct: 150 EDLVYCVMPYC-GAELFSFVEQQGAFLEDRA---RQYFREILCGTNYLHSRGVCHRDLSLENVLV--SQNTCIIIDMGMCLRMPVDQTTGKHLLINPQGQCGKRNYMSPEIFLNKRPFSGEAIDFWACGIILFIMLTGVPPFETATEVDPRFQM-ISSWRLSEMLSLWEINLSP---EAVDLLSRMLRPNPQERLKYEEIMAHPW 344
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S1FQV0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQV0_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.900e-28 Identity = 73/208 (35.10%), Postives = 115/208 (55.29%), Query Frame = 2
Query: 452 DDTVYLLTKYVDGGEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLM--PIDEEYRRLQSLP--DGRKAKSSYCSPETFKEKAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVV-KGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAW 1060
D +Y++ + DGGE+F G F R FRQ+++GL + G+CH D+SLEN++V T + I+D+GM L + P +E+ L+ L G K +Y +PE ++ KA+DG +D++ TG +LFMMLTG P+ D F+ + K ++E + L L P +A +L+ GM+ DP++RL QV+ H W
Sbjct: 179 DSHLYMIMPFADGGELFGFIERRGVFPEEEA---RYWFRQILDGLHFLQGSGVCHRDISLENLIV--TGDRVLIMDFGMCLRVASPAEEQNTALRRLMARQGTCGKINYMAPEIYRNKAFDGFSIDLWCTGVVLFMMLTGTQPWERPCD-DIAFRYIAANKSRLQEVLDTWHLTLSP---EAVDLISGMLKEDPRRRLTLQQVMEHEW 377
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S1YQ27_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQ27_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.690e-28 Identity = 76/215 (35.35%), Postives = 117/215 (54.42%), Query Frame = 2
Query: 452 DDTVYLLTKYVDGGEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEE-----------YRRLQSLPDGRKAKSSYCSPETFKE-KAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAW 1060
D +Y + GE+F DG F+ + R FRQL+ GL + G+CH D+SLEN+L+D+ TK+ IID GM L +P ++ RRL S P G+ K +Y SPE + +++DG +DV+A G +LF+ML G PF A+R D +F++ + KG + + + + P +A +LL M+ DPK RL +++ H W
Sbjct: 10 DKYLYSFMPFCSCGELFGFVDRDGRFSEP---VARFWFRQLINGLCHLQRMGVCHRDLSLENILIDQY-TKSLIIDLGMCLRVPFGDDDGNIMDVSGGTLRRLMS-PQGQCGKPNYISPEVLQNTESFDGFAIDVWAAGIILFIMLVGLPPFEWANREDPRFRM-ITKGGLMRMLTQWQRPISP---EAGDLLQRMLKEDPKDRLSLVEIMDHQW 215
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S1DBQ5_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBQ5_CYCTE) HSP 1 Score: 127 bits (319), Expect = 9.460e-28 Identity = 83/262 (31.68%), Postives = 128/262 (48.85%), Query Frame = 2
Query: 452 DDTVYLLTKYVDGGEMFNIF-----------LEDGAFTRARTKLVRGL----FRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMP--------------IDEEYRRLQSLPDGRKAKSSYCSPETF-KEKAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAWFAH*VFC*VGLVPAVEPLETQKATVCPLW 1147
D+ +Y + Y GG++F L D F +A T++ G FRQL+ GL + KG+CH D+SLEN+++D + IID GM L +P + + RL G+ K Y +PE +E +DG +D++A G +LF+ML G PF A D+++ + KGN+KE + L+L ++A +LL M +DP+KRL Q+L H W + F VP P +T+ +W
Sbjct: 206 DEYLYTIMPYCAGGDLFGRVMGNDKTRTDSQLSDKTFDQAGTQVEEGKARLWFRQLLSGLFHLQRKGVCHRDISLENLMIDDENDELKIIDMGMCLRVPYVDLDNEASDRVTDVSDGTERLLMKSQGQGGKLMYMAPEVVAREDVFDGFAIDLWAAGVVLFVMLVGLAPFKWAHPSDKRYAK-IAKGNLKELMSGLHLDL---SDEACDLLQNMFWWDPRKRLTLAQILQHPWVQNKKFAMPATVP---PPKTKPVHSQAIW 460
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S2P167_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P167_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.360e-27 Identity = 78/216 (36.11%), Postives = 112/216 (51.85%), Query Frame = 2
Query: 461 VYLLTKYVDGGEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEE------------YRRLQSLPDGRKAKSSYCSPETFKE-KAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAWFAH 1069
+Y Y GGE+F+ DG F L R FRQL++G+ + GICH DMSLENVLVD A +ID GM L +P ++ RRL P G+ K +Y SPE + + +DG VDV+A G +LF ML G P+ A++ D +FK++ + G + E + + P A +LL G++ P+ RL Q++ H W H
Sbjct: 173 LYSFMPYCSGGELFSYVQRDGRFPEP---LARFWFRQLVQGIFHLQKAGICHRDMSLENVLVDGNN--AVVIDLGMCLRIPFSDDDTGGVTDVTAYTLRRLMP-PQGQCGKPNYMSPEVLENSEPFDGFGVDVWAVGIILFTMLVGLPPWDWATKEDLRFKMIAIDGQLGEMLRQWGRSVSPL---ATDLLQGILRAHPRDRLTFGQIMDHEWVIH 379
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S2KZ52_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZ52_9STRA) HSP 1 Score: 123 bits (309), Expect = 6.390e-27 Identity = 71/208 (34.13%), Postives = 120/208 (57.69%), Query Frame = 2
Query: 452 DDTVYLLTKYVDGGEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEEYRR----LQSLPDGRKAKSSYCSPETFKEK-AYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAW 1060
+D +Y++ + GE+F++ ++ +F +T R + +Q++ G+K H GICH D+SLENVL+ + IID+G+ L +P E RR ++ P G+ K Y +PE ++ A++ +DV++ G+MLFMMLT + P+ S D F + ++G ++E I L+L ++ +L+ GMM DP+KRL +VL H W
Sbjct: 187 EDNLYIVMPFCRDGELFDLVSDNASFDEIQT---RSIMKQILVGVKAMHDAGICHRDLSLENVLLHEGNCQ--IIDFGLCLRVPQHEGLRRDTKSIRMKPQGKCGKLFYMAPEIYENTDAFNPYAIDVWSLGAMLFMMLTSSPPYDRPSPTDDMF-VWFMRGEMEEIIKAWGLQL---SSEVIDLMSGMMCVDPEKRLTLSEVLEHPW 385
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A1E7FBI2_9STRA (Ser/thr kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBI2_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.240e-26 Identity = 74/210 (35.24%), Postives = 115/210 (54.76%), Query Frame = 2
Query: 452 DDTVYLLTKYVDGGEMFNIFL----EDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPIDEEYRRLQSL--PDGRKAKSSYCSPETFKE-KAYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAW 1060
D+ ++ + Y GG++F + + E G + R FRQ++ GL++ S G+CH D+SLENVLV + IID GM L +P YR ++ L P G K +Y SPE F A+DG +D++A G +L++MLTG P+ AS+ D++F L +V GN+ + + L G +LL M+ DP+ RL +++ H W
Sbjct: 36 DEYLFTVMPYCSGGDLFGVVVKYAEESGGEIGMPEPVARFWFRQILLGLQHLQSVGVCHRDLSLENVLV--SSENCLIIDMGMCLRVP----YRTIRRLIKPQGVCGKHNYMSPEIFANTNAFDGFSIDLWAAGVILYIMLTGFPPYDQASQTDQRFDL-IVNGNLIRQLESWDIRLSQNGG---DLLQSMLQVDPRDRLTLAEIMAHPW 235
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Match: A0A7S2N0N2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0N2_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.270e-26 Identity = 79/213 (37.09%), Postives = 116/213 (54.46%), Query Frame = 2
Query: 461 VYLLTKYVDGGEMFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVDRTRTKAYIIDYGMSLLMPI---DEE---------YRRLQSLPDGRKAKSSYCSPETFKEK-AYDGVKVDVFATGSMLFMMLTGAYPFAIASRLDRKFKLLVVKGNVKETIGPNRLELMPRGNQAAELLGGMMAYDPKKRLLPDQVLHHAW 1060
+Y + GE+F DG FT T R FRQL+ GL + G+CH D+SLEN+LVD+ TK+ IID GM L +P D++ RRL + P G+ K +Y SPE K ++DG +DV+A G +LF+ML G PF A+R D +F+++ G ++ R P +A +LL M+ DP++RL +++ HAW
Sbjct: 170 LYSFMPFCTCGELFGYVDRDGRFTEPVT---RWWFRQLINGLYHLQKMGVCHRDLSLENILVDQY-TKSLIIDMGMCLRVPFGGDDDDSITDVSAGTLRRLMT-PQGQCGKPNYISPEVLKNTDSFDGFAIDVWAAGIILFIMLVGLPPFEWANREDPRFRMITGGGLMRMLTQWQR----PISPEAGDLLQRMLREDPRERLSLVEIMDHAW 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69291.14576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69291.14576.1 >prot_H-elongata_contig69291.14576.1 ID=prot_H-elongata_contig69291.14576.1|Name=mRNA_H-elongata_contig69291.14576.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp MFNIFLEDGAFTRARTKLVRGLFRQLMEGLKYTHSKGICHADMSLENVLVback to top mRNA from alignment at H-elongata_contig69291:103..3256+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69291.14576.1 ID=mRNA_H-elongata_contig69291.14576.1|Name=mRNA_H-elongata_contig69291.14576.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3154bp|location=Sequence derived from alignment at H-elongata_contig69291:103..3256+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69291:103..3256+ >mRNA_H-elongata_contig69291.14576.1 ID=mRNA_H-elongata_contig69291.14576.1|Name=mRNA_H-elongata_contig69291.14576.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig69291:103..3256+ (Himanthalia elongata Himel1 dioecious)back to top |