mRNA_H-elongata_contig69131.14559.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: D7FM86_ECTSI (Mitochondrial fission process protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM86_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.790e-39 Identity = 70/117 (59.83%), Postives = 89/117 (76.07%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYKEYSEGRGKLAAAKMGLDVMLWQLLASVAVPGLTINLV--AMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKWL 345
L+ + A+SIAYV GDT+DKAYK+Y+ G+G + K GLDV+LWQ LASVAVPGLTIN+ A A MAS+ ++PK+ARKW PTA+GLGIIP IV PIDDA++ MD ++R WL
Sbjct: 139 LVVPSYAVSIAYVCGDTVDKAYKDYTNGKGMVTVGKTGLDVLLWQSLASVAVPGLTINIAVKAASAAMASDHTKSLLPKLARKWVPTAVGLGIIPFIVTPIDDAISWGMDKTVRTWL 255
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: K3W7W3_GLOUD (Mitochondrial fission process protein 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7W3_GLOUD) HSP 1 Score: 107 bits (266), Expect = 5.210e-27 Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYK--------EYSEGRGKLAAAKMGLDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
L+ + A++ AYV GDT+DKA K S+G+ + A +D +LWQ +ASVA+PG TIN V ++ A+E + +P V R+WAPTAIGLG+IPLI+HPID V MDS+ RKW
Sbjct: 43 LVAPSYAVAFAYVLGDTLDKASKAEARAQTQRLSDGKHRAVVADATVDTLLWQTMASVAIPGFTINRVVALSSAATERTVKNLPLV-RRWAPTAIGLGVIPLIIHPIDHLVDQIMDSTTRKW 163
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: A0A6A3XT91_9STRA (Mitochondrial fission process protein 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XT91_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.340e-23 Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYKEYSEG--------RGKLAAAKMGLDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
L+ + ++ YV GDT DKA K +++ + A +D + WQ +ASV +PG TIN V ++ A + + P V R+WAPTAIGLG+IPLI+HPID V +AMD ++RKW
Sbjct: 38 LVVPSYLVAFGYVLGDTFDKANKAHAKAVAEGVSTRKRSAVVADATIDTLAWQTMASVVIPGFTINRVVAMSSFAVQRAVKTSP-VVRRWAPTAIGLGVIPLIIHPIDSFVDVAMDQTVRKW 158
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: H3G9A4_PHYRM (Mitochondrial fission process protein 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9A4_PHYRM) HSP 1 Score: 97.1 bits (240), Expect = 3.510e-23 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 22 ISIAYVSGDTMDKAYKEYSEG--------RGKLAAAKMGLDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
++ YV GDT DKA K +++ + A +D + WQ +ASV +PGLTIN V + +A + + P V R+WAPTAIGLG+IPLI+HPID V AMD S+RKW
Sbjct: 42 VAFGYVLGDTFDKASKAHTKAVDEGVSSRKRNALVADATIDTLAWQTMASVVIPGLTINRVVALSCVAVQRAAKNSP-VVRRWAPTAIGLGVIPLIIHPIDSFVDAAMDKSLRKW 155
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: A0A8K1FFS0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFS0_PYTOL) HSP 1 Score: 96.7 bits (239), Expect = 5.090e-23 Identity = 54/123 (43.90%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYK--------EYSEGRGKLAAAKMGLDVMLWQLLASVAVPGLTIN-LVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
L+ + ++ YV GDT DKA K E G+ A +D +LWQ +ASV +PG TIN +VA+ +T+A +++ + V R+WAPTAIGLG+IPLI+HPID V MD++ RKW
Sbjct: 36 LVVPSYVVAFGYVLGDTYDKATKASQVADKQELPSGKLTALVANATVDTLLWQTMASVVIPGFTINRVVALSSTIAQKTLQQ--SPVLRRWAPTAIGLGVIPLIIHPIDHFVDFLMDNTTRKW 156
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: A0A2D4CAK2_PYTIN (Mitochondrial fission process protein 1 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAK2_PYTIN) HSP 1 Score: 95.9 bits (237), Expect = 1.310e-22 Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYKEY--------SEGRGKLAAAKMGLDVMLWQLLASVAVPGLTIN-LVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
L+ + ++ YV GDT DKA K + SE + A +D +LWQ LASVA+PG TIN +VA+ A +A +++ + V R+WAPTA+GLGIIPLI+HPID V MD + R+W
Sbjct: 47 LVVPSYLVAFGYVLGDTYDKATKAHALATTQGVSEQKRTALTANAAVDTLLWQSLASVAIPGFTINRVVALSAAVAEKTLKQ--SPVLRRWAPTALGLGIIPLIIHPIDSLVDNVMDRTTRQW 167
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: A0A833T3X4_PHYIN (Mitochondrial fission process protein 1 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T3X4_PHYIN) HSP 1 Score: 95.1 bits (235), Expect = 1.940e-22 Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 22 ISIAYVSGDTMDKAYKEY--------SEGRGKLAAAKMGLDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
++ YV GDT DKA K + S + A +D + WQ +ASV +PG TIN V + + + T+ + V R+WAPTAIGLG+IPLI+HPID V LAMD ++RKW
Sbjct: 42 VAFGYVLGDTFDKATKAHVKAVEQQVSRRKRNALVADATVDTLAWQTMASVVIPGFTINRVVATSVLMVQQETKNL-LVVRRWAPTAIGLGVIPLIIHPIDSLVDLAMDKTVRKW 155
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: A0A0W8D9G0_PHYNI (Mitochondrial fission process protein 1 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D9G0_PHYNI) HSP 1 Score: 93.6 bits (231), Expect = 6.320e-22 Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYKEYSEGRGKLAAAKMG--------LDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
L+ + ++ YV GDT DKA K +++ + +++ +D ++WQ +ASVA+PG TIN + A S V R+WAPTAIGLG+IPLI+HPID V LAMD ++RKW
Sbjct: 36 LVVPSYLVAFGYVLGDTFDKATKAHAKAMEQRVSSRKRNALVVDATVDTLVWQTMASVAIPGFTIN----RVRAAKNS------PVVRRWAPTAIGLGVIPLIIHPIDSFVDLAMDKTVRKW 147
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: A0A329T1M2_9STRA (Mitochondrial fission process protein 1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1M2_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.510e-21 Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 22 ISIAYVSGDTMDKAYKEY---------SEGRGKLAAAKMGLDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRKW 342
++ YV GDT DKA K + S R L A + +D + WQ +ASV +PG TIN V ++ + + P V R+W PTAIG+G+IPLI+HPID V LAMD ++RKW
Sbjct: 43 VAFGYVLGDTFDKATKAHATAVDQQVSSRKRNALVADAI-IDTLAWQTMASVVIPGFTINRVVAMSSFVVQRAAKNSP-VVRRWTPTAIGVGVIPLIIHPIDSFVDLAMDKTVRKW 156
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Match: G4YFS8_PHYSP (Mitochondrial fission process protein 1 (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YFS8_PHYSP) HSP 1 Score: 92.4 bits (228), Expect = 1.660e-21 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 1 LLTATDAISIAYVSGDTMDKAYKEYSEG--------RGKLAAAKMGLDVMLWQLLASVAVPGLTINLVAMKATMASESVTRVVPKVARKWAPTAIGLGIIPLIVHPIDDAVTLAMDSSIRK 339
L+ + ++ YV GDT DKA K +S+ + A +D + WQ +ASV +PG TIN V ++ A + + P V R+WAPTAIGLG+IPLI+HPID V AMD ++RK
Sbjct: 34 LVVPSYLVAFGYVLGDTYDKASKAHSKAVAEGVSARKRNAVVADATIDTLAWQTMASVIIPGFTINRVVAMSSFAVQRAAKSSP-VVRRWAPTAIGLGVIPLIIHPIDSFVDAAMDKTVRK 153 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69131.14559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69131.14559.1 >prot_H-elongata_contig69131.14559.1 ID=prot_H-elongata_contig69131.14559.1|Name=mRNA_H-elongata_contig69131.14559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp LLTATDAISIAYVSGDTMDKAYKEYSEGRGKLAAAKMGLDVMLWQLLASVback to top mRNA from alignment at H-elongata_contig69131:305..828+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69131.14559.1 ID=mRNA_H-elongata_contig69131.14559.1|Name=mRNA_H-elongata_contig69131.14559.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=524bp|location=Sequence derived from alignment at H-elongata_contig69131:305..828+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69131:305..828+ >mRNA_H-elongata_contig69131.14559.1 ID=mRNA_H-elongata_contig69131.14559.1|Name=mRNA_H-elongata_contig69131.14559.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=696bp|location=Sequence derived from alignment at H-elongata_contig69131:305..828+ (Himanthalia elongata Himel1 dioecious)back to top |