mRNA_H-elongata_contig69036.14550.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: D8LCM6_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM6_ECTSI) HSP 1 Score: 112 bits (280), Expect = 8.640e-28 Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 7 VVLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPERQK 261
VVLDVA+AGGEPA++++KA+P ATV+ TDFAP M+++I+KR + GV N+ A + DG+ L+GF DGSVD VTC+WGL MP Q+
Sbjct: 113 VVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAAEEGVSNVVASVADGEALTGFGDGSVDAVTCTWGLLFMPNWQR 197
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A6H5JCB5_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB5_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 5.750e-23 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 7 VVLDVAAAGGEPALSMSKA--------IPHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPERQK 261
VVLDVA+AGGEPA++++KA +P AT++ TDFAP M+++I+KR + GV N+ A + DG+ L+GF D +VD VTC+WGL MP Q+
Sbjct: 112 VVLDVASAGGEPAITIAKAREGIYRKAMPGATIHATDFAPVMIDLIRKRAVEEGVSNVVASVADGEALTGFGDETVDAVTCTWGLLFMPNWQR 204
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A388LYJ6_CHABU (Methyltransf_25 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LYJ6_CHABU) HSP 1 Score: 83.2 bits (204), Expect = 4.380e-17 Identity = 36/87 (41.38%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 SPVVLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPERQK 261
SP+VLDVA G A+ +++ P A + TDF+ MVE +K+ ++AGV N+ A++ DGQ++ DGSVDV+TC++G+ +R +
Sbjct: 72 SPIVLDVAGGTGWCAIKVAQRFPQAQITATDFSSAMVEFMKRNIKEAGVANIVAKVMDGQDMKEVGDGSVDVLTCNFGINCFQDRAR 158
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A7S0VV22_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VV22_9CRYP) HSP 1 Score: 73.2 bits (178), Expect = 4.250e-14 Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 1 SPVVLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPERQK 261
+P +LD+A+ GEPA ++++AIP A+V TD +P MV K A + N+KA D + +S SDGS+DVVTC +G P ++K
Sbjct: 67 NPTILDLASGPGEPAATIARAIPGASVIATDISPDMVATAAKVA--ATLPNMKAEACDMEAISAHSDGSLDVVTCCYGFMFPPNKEK 151
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A835YPT1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT1_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 6.890e-9 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 4 PVVLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRC----EQAGVQNLKARIEDGQELSGFSDGSVDVVT 222
P VLDVA+A GEPA+S+++ +P ATV+ TD++PGMVE + R E G+ N+ +G +DG D++T
Sbjct: 76 PSVLDVASAAGEPAVSIARLLPQATVHATDYSPGMVEALNTRVAVLRETEGLANVH---------TGVADGESDILT 143
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A7J9YQC7_9ACTN (Methyltransferase domain-containing protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YQC7_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 1.870e-8 Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 1
Query: 10 VLDVAAAGGEPALSMSKAI-PHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPE 252
+L++AA G ++++ + V TDFAPGMVE+ ++R ++ G+ NL+ R+ D + + D SVD V C WG M +
Sbjct: 51 ILELAAGTGRTGFAVAERVGDEGRVISTDFAPGMVEVARRRGKELGLDNLEHRVLDAEAME-LDDASVDGVVCRWGYMLMAD 131
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: R1EHR3_EMIHU (Methyltransf_25 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EHR3_EMIHU) HSP 1 Score: 57.8 bits (138), Expect = 6.430e-8 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 10 VLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGV--QNLKARIEDGQELSGFSDGSVDVVTCSWGL 237
+LD+A GEPA +++K P+A+V +DF GM+ ++R + G+ Q A++ D +LS + S+D+VTCS GL
Sbjct: 41 ILDLACGPGEPACTLAKTFPNASVTASDFTDGMLAQAQERVAENGLGDQVTVAKL-DFNDLSSIASESIDLVTCSLGL 117
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A7S3LDF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDF4_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.380e-7 Identity = 26/76 (34.21%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 34 GEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPERQK 261
GEPA ++++ P ATV TD +P V + ++ A + ++ ++ D +LS F D S D+VTC +G P+ K
Sbjct: 3 GEPAETIARQFPQATVVATDISPDQVALAQQTT--ATLPHMTVQVADMMDLSDFEDESFDIVTCCYGFMFPPDIPK 76
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: A0A6M5Y9H3_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Spirosoma taeanense TaxID=2735870 RepID=A0A6M5Y9H3_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 9.070e-7 Identity = 27/85 (31.76%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 10 VLDVAAAGGEPALSMSKAI-PHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIEDGQELSGFSDGSVDVVTCSWGLESMPERQK 261
VLD+AA GE +++ ++ + P V TD + +++ K+ +QAG+ N+K ++ DG+ L+ D + D V GL P++Q+
Sbjct: 59 VLDIAAGAGEQSITTARRVGPSGYVLATDISSNILDYAKQMAQQAGLNNVKTQVMDGENLT-LDDETFDAVISRVGLIYFPDQQR 142
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Match: R7CE63_9ACTN (Demethylmenaquinone methyltransferase n=1 Tax=Cryptobacterium sp. CAG:338 TaxID=1262868 RepID=R7CE63_9ACTN) HSP 1 Score: 54.3 bits (129), Expect = 1.230e-6 Identity = 25/86 (29.07%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 10 VLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGVQNLKARIE--DGQELSGFSDGSVDVVTCSWGLESMPERQK 261
+LD+A G+ A + P A++ +D+ P M+E+ + R ++ + + + DGQ++ + D S D++T S+G+ +MPER++
Sbjct: 100 LLDIAGGTGDVAFTACAQKPPASIVLSDYTPAMLEVAQARLDEGEAKGVPVELAVVDGQDIP-YEDESFDILTMSYGIRNMPERER 184 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69036.14550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69036.14550.1 >prot_H-elongata_contig69036.14550.1 ID=prot_H-elongata_contig69036.14550.1|Name=mRNA_H-elongata_contig69036.14550.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp SPVVLDVAAAGGEPALSMSKAIPHATVYGTDFAPGMVEMIKKRCEQAGVQback to top mRNA from alignment at H-elongata_contig69036:132..1071- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69036.14550.1 ID=mRNA_H-elongata_contig69036.14550.1|Name=mRNA_H-elongata_contig69036.14550.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=940bp|location=Sequence derived from alignment at H-elongata_contig69036:132..1071- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69036:132..1071- >mRNA_H-elongata_contig69036.14550.1 ID=mRNA_H-elongata_contig69036.14550.1|Name=mRNA_H-elongata_contig69036.14550.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig69036:132..1071- (Himanthalia elongata Himel1 dioecious)back to top |