mRNA_H-elongata_contig118733.1451.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: D8LRY2_ECTSI (ArfGAP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY2_ECTSI) HSP 1 Score: 140 bits (353), Expect = 4.120e-37 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1
Query: 1 QTNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEHAL 225
+ NPECADC A PDWVSLNLGVL+CIQCSGIHRSLGTHVSKVRSLGLDALDE DLSV+REVGNARSNAIWEH+L
Sbjct: 494 KANPECADCGAPNPDWVSLNLGVLVCIQCSGIHRSLGTHVSKVRSLGLDALDEIDLSVLREVGNARSNAIWEHSL 568
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A6H5L7N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7N2_9PHAE) HSP 1 Score: 139 bits (351), Expect = 8.100e-37 Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 1
Query: 1 QTNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEHAL 225
+ NPECADC A PDWVS+NLGVL+CIQCSGIHRSLGTHVSKVRSLGLDALDE DLSV+REVGNARSNAIWEH+L
Sbjct: 566 KANPECADCGAPNPDWVSINLGVLVCIQCSGIHRSLGTHVSKVRSLGLDALDEIDLSVLREVGNARSNAIWEHSL 640
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: W7TN28_9STRA (Ankyrin repeat-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN28_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.850e-27 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 1 QTNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEH 219
Q NP CADC A +PDWVSLNLGV++C+QCSG+HRSLG HVSK+RSL LD +D DL++V +GN R N ++E+
Sbjct: 22 QQNPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEY 94
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A835ZDE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE7_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.540e-26 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 7 NPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWE 216
N CADC AA PDWVSLNLGV++CI CSGIHRSLG+H+SKVRSL LDAL ETDL V VGN ++N +WE
Sbjct: 556 NTTCADCGAAGPDWVSLNLGVVVCIGCSGIHRSLGSHISKVRSLALDALTETDLCVALHVGNEKANQLWE 625
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A183HVS6_9BILA (Arf-GAP domain-containing protein n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183HVS6_9BILA) HSP 1 Score: 100 bits (248), Expect = 1.550e-25 Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 7 NPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEHA 222
N CADC A PDW SLNLG L+CI+CSGIHR+LG+H+SKVRSL LD L+V+ +GN ++NAIWEH+
Sbjct: 8 NDSCADCDAPKPDWASLNLGTLICIECSGIHRNLGSHISKVRSLDLDDWPMEYLNVMEAIGNKKANAIWEHS 79
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A4D9D8E4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8E4_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.930e-25 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 1 QTNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEH 219
Q NP CADC A +PDWVSLNLGV++C+QCSG+HRSLG HVSK+RSL LD +D DL++V +GN R N ++E+
Sbjct: 655 QQNPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNQVYEY 727
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A448Z6Q3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6Q3_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.950e-25 Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 1 QTNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEHAL 225
+ NP CADC A PDWVSLNLGVL+CI CSG+HRSLG HVSKVRSL LDAL E + +V+ +GN +N IWE +
Sbjct: 1312 KANPTCADCGAENPDWVSLNLGVLICIDCSGVHRSLGVHVSKVRSLKLDALTEFEANVILAIGNENANGIWEEGV 1386
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A7S4HYM5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HYM5_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.160e-25 Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 7 NPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEHAL 225
NP CADC AA PDWVSLNLGV++CI CSG+HRSLG HVSKVRS+ LD L E + +++ +GN R+N +WE AL
Sbjct: 808 NPTCADCGAADPDWVSLNLGVVICIDCSGVHRSLGVHVSKVRSMRLDDLSEAESNLLLALGNKRANVLWEAAL 880
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A1X2HWK9_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HWK9_SYNRA) HSP 1 Score: 104 bits (259), Expect = 2.320e-24 Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 4 TNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETD--LSVVREVGNARSNAIW 213
+N CADC AA PDW SLNLG+L+CI+CSGIHRSLGTHVSKVRSL LD+ T ++++R +GNARSNA+W
Sbjct: 570 SNSVCADCGAANPDWCSLNLGILLCIECSGIHRSLGTHVSKVRSLTLDSTSYTPDIIALLRSIGNARSNAVW 641
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Match: A0A7S1D2Y4_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2Y4_CYCTE) HSP 1 Score: 99.4 bits (246), Expect = 3.450e-24 Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 7 NPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDALDETDLSVVREVGNARSNAIWEHAL 225
NP CADC A PDW SLNLGV++CI+CSG+HRSLG H+SKVRSL LD+L + + ++ +GN N IWE AL
Sbjct: 121 NPYCADCGAPQPDWASLNLGVMVCIECSGVHRSLGVHLSKVRSLKLDSLSDAEGRLLLAMGNTVLNTIWERAL 193 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118733.1451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig118733.1451.1 >prot_H-elongata_contig118733.1451.1 ID=prot_H-elongata_contig118733.1451.1|Name=mRNA_H-elongata_contig118733.1451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp QTNPECADCSAAYPDWVSLNLGVLMCIQCSGIHRSLGTHVSKVRSLGLDAback to top mRNA from alignment at H-elongata_contig118733:376..1320- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig118733.1451.1 ID=mRNA_H-elongata_contig118733.1451.1|Name=mRNA_H-elongata_contig118733.1451.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=945bp|location=Sequence derived from alignment at H-elongata_contig118733:376..1320- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig118733:376..1320- >mRNA_H-elongata_contig118733.1451.1 ID=mRNA_H-elongata_contig118733.1451.1|Name=mRNA_H-elongata_contig118733.1451.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig118733:376..1320- (Himanthalia elongata Himel1 dioecious)back to top |