mRNA_H-elongata_contig68733.14509.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: D8LNX5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX5_ECTSI) HSP 1 Score: 377 bits (968), Expect = 2.040e-118 Identity = 190/269 (70.63%), Postives = 216/269 (80.30%), Query Frame = 1
Query: 1 QVMFLKTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
+VMFLKT+H KAI+CYR VL+ KPNNYQAL+KLIGLLRRAG+L+EVP LL+LAKAG+PRSSAHAGLRFC GLYHRY ND+HEA+ LN AR DGEWG +ALEHLIEIY+SPNGDHLWEVVT + AE+L +A+ LSEL+K D + +A ++ RYLE+ VKMM R K VD AM G++SMLEDDKENV LLGMSLAFTLE SPNKARNALKRIAKMPYTLE AEEFEQAYLHLA LYVDRGKFDLAQ RR+
Sbjct: 957 EVMFLKTDHAKAIQCYRSVLKQKPNNYQALQKLIGLLRRAGQLNEVPALLELAKAGDPRSSAHAGLRFCSGLYHRYTNDMHEAVRQLNRARQDGEWGAQALEHLIEIYISPNGDHLWEVVTSPQGGEGSAESLGIAKFFLSELQKISRGDSRSGAGATGGTNKAGIRLRYLESAVKMMARDKESVDAAMTGFMSMLEDDKENVPALLGMSLAFTLEDSPNKARNALKRIAKMPYTLESAEEFEQAYLHLAHLYVDRGKFDLAQDLCRRS 1225
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A7S2FRK9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRK9_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.030e-58 Identity = 114/265 (43.02%), Postives = 164/265 (61.89%), Query Frame = 1
Query: 10 FLKTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRR 804
F + ++A+ Y VL+ KPNNY AL+KLI LL+R+GKL++ P+ L LA+ N R+ +HAGL FC+GLYHR +DIHEA+ H N R DGEWGR L +++E+Y++P+ D+ W+ + S A EA+ +A L+ EL V ++ L K+ G K+ +D A +I MLE+D+E V +LG+S F EK+ NKARN LKRIAKM ++ ++ +EFE AYL+LA +Y+ R K+DLA RR
Sbjct: 473 FAQGNDEEAMSEYMKVLKRKPNNYNALKKLIVLLKRSGKLTDAPKYLKLAERNNARAFSHAGLHFCKGLYHRSSDDIHEAVKHFNLGRRDGEWGRECLTNMVEVYLNPDNDNTWDAESDGNSGQA--EAVKIAGKLMDELAAMTPTPHP--------VGFRVLQTYSLLGEYKISGNKEQ-LDRAEQQFIEMLEEDREFVPAMLGLSNVFMFEKAQNKARNMLKRIAKMQHSQDLCDEFESAYLNLADIYILRSKYDLALDLCRR 726
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A418APG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418APG6_9STRA) HSP 1 Score: 203 bits (516), Expect = 8.240e-56 Identity = 109/261 (41.76%), Postives = 158/261 (60.54%), Query Frame = 1
Query: 25 HDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
++ AI ++++L KP+N+ L + I +LR+AGKL P L LA+ PR + AGL +C+GLYHR+ N+IH+AI LNFAR D EWG+RAL H++EIY++P+ ++LW+ A D E + +A LL EL E M+ R LE M + K V+ A A + +LE+D++NV LL ++ A+ L K KARN LKRIAKM Y +A+EFE++Y+ LA +YV R K+DLAQ ++A
Sbjct: 822 NESAIFHFQNLLESKPDNFTVLSRFIVMLRQAGKLDRAPRFLKLAERAGPRVAHSAGLHYCKGLYHRFQNNIHDAIQELNFARKDSEWGQRALVHMVEIYINPDNENLWDNPDEATKDQV--ENIRIANALLDEL-----------------APEKTMRIRVLECYAAMSAKNKAMVEKATATLLELLEEDRDNVPALLALATAYMLAKQQPKARNQLKRIAKMNYDSTIADEFERSYILLADIYVSRSKYDLAQELCKKA 1063
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A485KXP9_9STRA (Aste57867_12996 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXP9_9STRA) HSP 1 Score: 203 bits (516), Expect = 8.940e-56 Identity = 107/267 (40.07%), Postives = 162/267 (60.67%), Query Frame = 1
Query: 7 MFLKTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
M K +++ AI ++++L KP+N+ L + IG+LR+AGKL P L LA+ PR + AGL +C+GLY+R++N+IH+AI N+AR DGEWG+RAL H+IEIY++P+ +++W+ S+ E + +A LL EL E ++ R LE M + K V+ A A + +LE+D++NV LL ++ A+ L K KARN LKRIAKM Y + +EFE++Y+ LA +YV R K+DLAQ ++A
Sbjct: 980 MLQKDDNESAIYHFQNLLEAKPDNFTVLSRFIGMLRQAGKLERAPRFLKLAERAGPRVAHSAGLHYCKGLYNRFLNNIHDAIEEFNYARKDGEWGQRALVHMIEIYINPDSENMWD--NPDDSNKEQVENIRIANALLDELSP-----------------EKTLRVRVLECYTAMAVKSKAMVEKATATLLELLEEDRDNVPALLALATAYMLAKQQPKARNQLKRIAKMNYDASIPDEFERSYILLADIYVSRSKYDLAQELCKKA 1227
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A7S1UGI0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGI0_9STRA) HSP 1 Score: 195 bits (496), Expect = 5.180e-54 Identity = 111/267 (41.57%), Postives = 156/267 (58.43%), Query Frame = 1
Query: 7 MFLKTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRR-AGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRR 804
+FL+ E A+E Y+ +L PNNY+AL KL LL R G L EV L+D A + +PRS++HAGL +CRG++ R ND A+ + N AR DG WG R+LE ++ +Y++P G ++WE S DA AE V + LL E A + LEN ++ R++ +D AM ++ ML++D+E+V LLGMS AF + + KARN LKRI KM Y +A EFE AYL LA+LY+++ KFDLA +R
Sbjct: 388 LFLQDELADAMEQYQSLLGENPNNYRALSKLAELLPRYTGTLDEVQRLIDRAASADPRSASHAGLNYCRGVHARCANDPAAAVRYFNLARRDGVWGERSLEAMVRVYLNPGGGNMWE---DDGSGDAAAETQRVVQKLLGEWRAMGA---------------AEQTGQVLENHALLLTRRRADIDRAMQAFMGMLDEDRESVPALLGMSTAFMFDGAQQKARNTLKRIGKMQYQQGLAAEFEAAYLMLAELYIEKNKFDLANDLCKR 636
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A3R6XBN5_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XBN5_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.640e-51 Identity = 106/289 (36.68%), Postives = 160/289 (55.36%), Query Frame = 1
Query: 25 HDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLG----------------------------MSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
++ AI ++++L KP+N+ L + I +LR+AGKL P L LA PR + AGL +C+GLY+R+ N+IH+AI NFAR DGEWG+RAL H+IEIY++P+ ++LW+ + D E + +A LL EL + +++ R LE M + K V+ A A + +LE+D++NV LLG ++ A+ L K +KARN LKRIAKM Y + +EFE++Y+ LA +YV+R K+DLAQ ++A
Sbjct: 71 NESAIFHFQNLLESKPDNFTVLSRFIVMLRQAGKLDRAPRFLKLADRSGPRVAHSAGLHYCKGLYNRFQNNIHDAIQEFNFARKDGEWGQRALVHMIEIYINPDSENLWDNPDDSNKDQM--ENMRIANALLDELSP-----------------DKSVRIRVLECYAAMSAKTKPMVEKATATLLELLEEDRDNVPALLGTCVSQPSIQMNDNHPSNELLLLYIFYLALATAYMLAKQQSKARNQLKRIAKMNYDAAIPDEFERSYILLADIYVNRAKYDLAQELCKKA 340
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A7R9UC52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC52_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.740e-51 Identity = 107/267 (40.07%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 7 MFLKTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRR-AGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRR 804
+FLK E A+E Y+ +L PNNY+AL KL LL R G L+EV L++ A + RS++HAGL +CRG++ RY ND A+ H N AR DG WG RALE +I++Y++P ++W+ G ++A E + LL E + ++ +K R L + ++ R+ +D A ++ +L DD+E+V LLGMS+AF E KARN LKRI KM Y ++A EFE AYL LA+L +++ KFDLA +R
Sbjct: 1054 LFLKGEVTPALEHYQKILSDNPNNYRALAKLSELLPRYTGTLTEVERLIERAATADVRSASHAGLNYCRGVHARYANDPGHAVKHFNLARKDGVWGERALEAMIQVYLNPGNGNMWD---GGSGNEAAGETNRIISQLLQEWRDMECDE---------------IKGRILGSYALLLTRRTKDIDAAKQNFVDLLTDDRESVPALLGMSVAFMFEGQRPKARNTLKRIGKMQYQQDLASEFETAYLMLAELDIEKNKFDLAHGLCKR 1302
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A067D2Q1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2Q1_SAPPC) HSP 1 Score: 189 bits (481), Expect = 4.330e-51 Identity = 104/264 (39.39%), Postives = 156/264 (59.09%), Query Frame = 1
Query: 16 KTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
K +++ AI ++++L K +N+ L + I +LR AGKL VP L LA+ PR + AGL FC+GLY+RY N+IH+A+ N AR D EWG AL ++IEIY++P+ +++W+ S E + +A LL EL E +K R LE + + K ++ A+A ++ +LE +KE+V LLG++ A+ L K KARN LKRIAKM Y +A+EFE++Y+ LA +YV R K+DLAQ ++A
Sbjct: 955 KDDNESAIFHFQNLLEAKADNFAVLSRFITMLRHAGKLERVPRFLKLAERSGPRVAHSAGLHFCKGLYNRYQNNIHDAVAAFNLARKDPEWGSHALINMIEIYLNPDNENIWDT-PDVDSSKEQTENIRIANALLDEL-----------------PYEKTLKLRVLEAYAVLANKTKPTIEKAIAVFLEILEQEKESVAALLGLATAYMLAKQQPKARNQLKRIAKMNYDPTLADEFERSYILLADIYVSRSKYDLAQELCKKA 1200
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A6G0XY77_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XY77_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.100e-50 Identity = 104/258 (40.31%), Postives = 154/258 (59.69%), Query Frame = 1
Query: 34 AIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDAYAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
AI ++++L KP+N+ L + I +LR+AGKL P L LA+ PR + AGL +C GLY+R+ N+IH+AI NFAR DGEWG+RAL H+IEIY++P+ +++W+ A + E + +A LL EL E +++ R LE M + K V+ A + +LE+D++NV LL ++ A+ L K KARN LKRIAKM Y + +EFE++Y+ LA +YV R K+DLAQ ++A
Sbjct: 994 AIFHFQNLLENKPDNFTVLSRFIVILRQAGKLERAPRYLKLAERSGPRVAHSAGLHYCNGLYNRFQNNIHDAIEEFNFARKDGEWGQRALIHMIEIYINPDSENMWDNPDNATKEQN--ENIRIAHALLDELSP-----------------EKSVRIRVLECYAIMAAKTKPMVEKATTLLLEILEEDRDNVPALLALATAYMLAKQQPKARNQLKRIAKMNYDPAIPDEFERSYILLADIYVSRSKYDLAQELCKKA 1232
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Match: A0A1V9Z3U0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3U0_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.490e-50 Identity = 105/260 (40.38%), Postives = 157/260 (60.38%), Query Frame = 1
Query: 34 AIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLAKAGNPRSSAHAGLRFCRGLYHRYINDIHEAIHHLNFARIDGEWGRRALEHLIEIYVSPNGDHLWEVVTGAPSDDA--YAEALDVARVLLSELEKFDGEDGDARERERAVVTEAAMKRRYLENTVKMMGRKKNGVDGAMAGYISMLEDDKENVRGLLGMSLAFTLEKSPNKARNALKRIAKMPYTLEMAEEFEQAYLHLAQLYVDRGKFDLAQVTLRRA 807
AI ++++L KP+N+ L + I +LR AGKL VP L LA+ PR + AGL +C+GLY+R+ N+IH+AI LN AR D EWG +AL ++IEIY++P+ ++LW+ P D + E + +A LL EL + E + K R LE + + K ++ A+A ++ +LE D++NV LLG++ + L K KARN LKRIAKM Y +A+EFE++Y+ LA +YV R K+DLAQ ++A
Sbjct: 979 AIYHFQNLLEAKPDNFAVLSRFITMLRHAGKLDRVPRYLKLAERAGPRVAHSAGLHYCKGLYNRFQNNIHDAIAELNLARKDAEWGGQALINMIEIYLNPDNENLWD----NPDDSSKEQTENIRIANALLDELPQ-----------------ERSFKLRVLEAYAVLATKTKPAIEKAIAVFLEILELDRDNVAALLGLATGYMLAKQQPKARNQLKRIAKMNYDPTLADEFERSYILLADIYVSRSKYDLAQELCKKA 1217 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68733.14509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68733.14509.1 >prot_H-elongata_contig68733.14509.1 ID=prot_H-elongata_contig68733.14509.1|Name=mRNA_H-elongata_contig68733.14509.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp MFLKTEHDKAIECYRDVLRYKPNNYQALEKLIGLLRRAGKLSEVPELLDLback to top mRNA from alignment at H-elongata_contig68733:228..3022- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68733.14509.1 ID=mRNA_H-elongata_contig68733.14509.1|Name=mRNA_H-elongata_contig68733.14509.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2795bp|location=Sequence derived from alignment at H-elongata_contig68733:228..3022- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68733:228..3022- >mRNA_H-elongata_contig68733.14509.1 ID=mRNA_H-elongata_contig68733.14509.1|Name=mRNA_H-elongata_contig68733.14509.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1602bp|location=Sequence derived from alignment at H-elongata_contig68733:228..3022- (Himanthalia elongata Himel1 dioecious)back to top |