mRNA_H-elongata_contig68561.14493.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig68561.14493.1
Unique NamemRNA_H-elongata_contig68561.14493.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: D7FXC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC3_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 2.300e-117
Identity = 181/230 (78.70%), Postives = 201/230 (87.39%), Query Frame = 1
Query:    1 RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLS 690
            R+NKWRGTYH  IFGFF+LATSQV+ILQGDITTLSGVYTF+FLGVMTLFS+GTILLKFKRPSLPREVTVSY  T+ GI CVITAF+GN++SKP V+SWFLIYF+AVG V+VLVF RVRLLKILLK    +    ++SSIK+Q++ELQD PFVFFCKQ D YVINKAILYVRDNE TNRL+VVH S D E  TIKTLSK IEMFDTMYP+IKISLLTVTGSFSP  IDWLS
Sbjct:  507 RKNKWRGTYHYTIFGFFLLATSQVIILQGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAHPVCCDGVTSSIKDQLHELQDEPFVFFCKQPDTYVINKAILYVRDNEHTNRLIVVHCSNDVEGATIKTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLS 736          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A6H5L6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K0_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.210e-99
Identity = 160/240 (66.67%), Postives = 181/240 (75.42%), Query Frame = 1
Query:   67 QVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGP--------------------------------ISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLS 690
            Q ++ +GDITTLSGVYTF+FLGVMTLFS+GTILLKFKRPSLPREVTVSY  T+ GI CVITAF+GN++SKP V+SWFLIYF+AVG V+VLVF RVRLLKILLK  + +  G                                 ++SSIK+Q++ELQD PFVFFCKQ D YVINKAILYVRDNE TNRL+VVH S D E  TIKTLSK IEMFDTMYP+IKISLLTVTGSFSP  IDWLS
Sbjct:   68 QFMLRKGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAQPVCCGGRTFFFFQTRCGLARRFFPSFSIPYVFLFSEDGVTSSIKDQLHELQDEPFVFFCKQPDTYVINKAILYVRDNEHTNRLIVVHCSNDVEGATIKTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLS 307          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A836CNH3_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH3_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.520e-93
Identity = 151/230 (65.65%), Postives = 182/230 (79.13%), Query Frame = 1
Query:    1 RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLS 690
            R N+WRGT H IIFGFF+LAT+QV +L+GDIT LSGVYTFAFLGVM++FS G I+LKFKRP LPR+VTVSY     G+  V+TAF+GN+ISKP ++S+F +YFIAVGLV++ VFQR+R+LK+              + +KEQI EL+  P++FFCK  DLY INKAILYVR+NEQT+RLLVVHVS D E G IK LS  I MFDTMYPRIKISLLTV G+FSPALI+WLS
Sbjct:  418 RTNEWRGTNHFIIFGFFVLATTQVYLLRGDITLLSGVYTFAFLGVMSIFSSGCIILKFKRPKLPRDVTVSYAAIAIGLTFVLTAFVGNMISKPEILSYFSLYFIAVGLVVLSVFQRIRILKV--------------NFLKEQISELRSQPYLFFCKADDLYTINKAILYVRENEQTDRLLVVHVSPDTEGGHIKALSNHIMMFDTMYPRIKISLLTVEGTFSPALIEWLS 633          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A7S1UN14_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UN14_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.400e-62
Identity = 116/249 (46.59%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    4 QNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVST--DRESGTIK---------------------TLSKQIE-------MFDTMYPRIKISLLTVTGS 660
            +N+WRGT HN    FF+L+ SQV++L GD++ LSGVYTFAFLGVMT F +GTI+LKFKRPSLPREV ++Y     G++CV+  F+GNL+ K   +S+F  Y   VG+VIV++FQRVRL+K+L  +  S+      + +K  I EL+  P +FF K ADLYV+NKA+LY+RDNEQTN L+  HV+   D + GT                       TL + +        M D MYP++KIS L V G+
Sbjct:  417 KNRWRGTTHNTTLVFFLLSASQVIMLHGDVSGLSGVYTFAFLGVMTCFGVGTIMLKFKRPSLPREVHITYAHASLGVICVLATFLGNLMGKSDYVSYFSFYLCGVGIVIVIMFQRVRLMKLLYLVLRSLFPRSSFAGLKNIISELRSGPMIFFAKHADLYVLNKAVLYMRDNEQTNELIFAHVTPLRDGKQGTFAWLTGFSLDASAEDLLENVDADTLREDVSKMEIAARMLDEMYPKLKISFLCVQGA 665          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: W7U6R6_9STRA (Transmembrane protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6R6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 7.820e-59
Identity = 104/229 (45.41%), Postives = 152/229 (66.38%), Query Frame = 1
Query:    1 RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWL 687
            R+N WR T HNII G+ + +   VLIL+G++T LSGVY+ AFL V+ LF++GT+LLKFKRPSLPR+VTVS+   +     ++   +GNL+  P V+  FL Y  A G +++L+FQ   LL+  + +   I  G  +  +++++   Q  P +FFCK  D+YV+NKA+LYV  NEQ+  L+V+HV  D++      LS  +E FDTMYP+IK +LLT+ G F P LI++L
Sbjct:  447 RRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVH-DKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFL 674          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A4D9CZ99_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ99_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.760e-57
Identity = 103/229 (44.98%), Postives = 152/229 (66.38%), Query Frame = 1
Query:    1 RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWL 687
            ++N WR T HNII G+ + +   VLIL+G++T LSGVY+ AFL V+ LF++GT+LLKFKRPSLPR+VTVS+   +     ++   +GNL+  P V+  FL Y  A G +++L+FQ   LL+  + +   I  G  +  +++++   Q  P +FFCK  D+YV+NKA+LYV  NEQ+  L+V+HV  D++      LS  +E FDTMYP+IK +LLT+ G F P LI++L
Sbjct:  447 QRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVH-DKDHFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFL 674          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A1E7ERC1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERC1_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.690e-57
Identity = 95/234 (40.60%), Postives = 153/234 (65.38%), Query Frame = 1
Query:    4 QNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISS-----SIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLS 690
             N W GT   I+ GFF+L  SQV++L  D+  L GVY +AFL VMT+F++G ILLK KRP+LPRE+T S+  +I G++ V+ A +GN++ KP ++++F +YF+ +G +++++FQR +   +  +I  ++ +   +      +I + +   QD PFVFF K  DL++ NKA+LY+R NEQTN+++ VH +      +   L   +++ D +YPRIKISLL V  +F+   ++WLS
Sbjct:  407 SNPWTGTDSFILCGFFLLCVSQVILLDSDVEALGGVYCYAFLTVMTIFALGNILLKIKRPTLPREITTSWLQSILGLVSVVIALLGNILGKPELLTYFFVYFLIIGTLVLVMFQRTQKTNLSFQIYTTMILALTTKKREIITIADTVKNFQDIPFVFFVKHDDLHMANKAVLYIRKNEQTNKIIFVHCNGTSTETSTSNLQDHVKLLDLLYPRIKISLLVVNSNFNATTVEWLS 640          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: T0R2F2_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R2F2_SAPDV)

HSP 1 Score: 200 bits (509), Expect = 8.660e-57
Identity = 111/245 (45.31%), Postives = 158/245 (64.49%), Query Frame = 1
Query:    1 RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESI-------GIGPISSS-------IKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLST 693
            ++N  R T H I+FG+F +ATS VL+L+G++ TLSGVYT+AFLG+MTLF  G +LLKFKR  L R+V   +   I G+  VI AF GNL   P+++++F +YF  V LV+ L+F+R+  L++ + + + I          P+++        +K      +  P VFFCKQADL  INKAILYVR NEQT+RL++VHV  D E+G      + I MFD +YP++KI L+ V   F PALI+W++T
Sbjct:  390 QENSCRRTNHWILFGYFGVATSLVLVLEGNVETLSGVYTYAFLGLMTLFGSGCMLLKFKRADLKRDVIAPWWACILGVSLVIVAFFGNLCGDPTILTYFALYFSCVLLVVFLMFERLFFLRLAMYVLQRICPSTRKEETKPLATGARGGRTIVKAMRRITEACPTVFFCKQADLASINKAILYVRQNEQTSRLVIVHVY-DAETGVPDLFGESIVMFDKIYPKLKIDLVAVESVFGPALIEWVAT 633          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A7S4EFJ8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFJ8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.240e-56
Identity = 101/277 (36.46%), Postives = 162/277 (58.48%), Query Frame = 1
Query:    7 NKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKI-----TESIGIGPISSS--------------------------------------------IKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLS 690
            N W GT   I+ GFF+L  SQV++L  D+  L GVY +AFL VMT+F++G ILLK KRPSLPRE+T S+  +I G++ V+ A +GN++ KP ++++F +YF+ VG +++++FQRV ++++L K+      +S+ +G + S                                             I   + + Q+TPF+FF K  DL++ NKA+LY++ NEQTN+++ VH +T+    + K L + +++ D +YPR+KISLL V   F    ++WLS
Sbjct:  405 NPWTGTDSFILVGFFLLCVSQVIVLDCDVEALGGVYCYAFLTVMTIFALGNILLKIKRPSLPREITTSWLQSILGLIAVVIALLGNVLGKPELLTYFFVYFLIVGTLVLVMFQRVNIVRLLYKLFKSFQKKSVDVGSLYSEETEDEPLLAKKFGHVTASNDDEEDGMVSERVPEPPKRDESCLERIANTVKQFQETPFIFFMKHDDLHMANKAVLYIQKNEQTNKIIFVHCTTNSTRKSTKNLQEHVKLLDLLYPRVKISLLVVNSKFDATTVEWLS 681          
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Match: A0A3R7HF44_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HF44_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.230e-56
Identity = 102/232 (43.97%), Postives = 153/232 (65.95%), Query Frame = 1
Query:    1 RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFSIGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFLIYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTPFVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGT--IKTLSKQIEMFDTMYPRIKISLLTVTGSFSPALIDWLS 690
            + NK RGT H II  +F+L++S VLIL  D TT++GVYT++FLG+M LFS   +LLK KR  +PR++   +   + G L ++ A   NL+  P V+ +F IYFI V L + ++F+RV +L+  ++ T + G      +I   I  ++D P VFFCK  DL +INKAI+YVR NEQT+ L +VHV +D E+ T  +    + + +FD+MYP+I++  ++V G FSPA+I+WLS
Sbjct:  405 KTNKARGTNHYIIGLYFLLSSSLVLILNADATTVNGVYTYSFLGLMALFSCACMLLKGKRSEIPRDIHAPWAAVVIGFLLIVVAIFANLLGDPKVLMYFAIYFIVVMLAMFVMFERVTILRSEVEHTGARG----GRTIARTIVSIRDAPIVFFCKVPDLTIINKAIIYVRRNEQTHTLRIVHVFSDEEADTPVLTAFREMVTLFDSMYPKIRVDFVSVQGEFSPAMIEWLS 632          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68561.14493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXC3_ECTSI2.300e-11778.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6K0_9PHAE1.210e-9966.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CNH3_9STRA1.520e-9365.65Amino acid permease-domain-containing protein n=1 ... [more]
A0A7S1UN14_9STRA1.400e-6246.59Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7U6R6_9STRA7.820e-5945.41Transmembrane protein n=2 Tax=Nannochloropsis gadi... [more]
A0A4D9CZ99_9STRA2.760e-5744.98SET domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A1E7ERC1_9STRA3.690e-5740.60Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
T0R2F2_SAPDV8.660e-5745.31Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S4EFJ8_9STRA1.240e-5636.46Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A3R7HF44_9STRA3.230e-5643.97Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68561contigH-elongata_contig68561:251..3175 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.8
Seed ortholog evalue9.8e-97
Seed eggNOG ortholog2880.D7FXC3
EggNOG free text desc.Amino acid permease
EggNOG OGs28KN3@1,2QT3M@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons4
Model size696
Cds size696
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68561.14493.1prot_H-elongata_contig68561.14493.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig68561 251..3175 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931080.257827-CDS-H-elongata_contig68561:250..5491622931080.257827-CDS-H-elongata_contig68561:250..549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 251..549 -
1691679689.7693803-CDS-H-elongata_contig68561:250..5491691679689.7693803-CDS-H-elongata_contig68561:250..549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 251..549 -
1622931080.269707-CDS-H-elongata_contig68561:1506..16631622931080.269707-CDS-H-elongata_contig68561:1506..1663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 1507..1663 -
1691679689.782611-CDS-H-elongata_contig68561:1506..16631691679689.782611-CDS-H-elongata_contig68561:1506..1663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 1507..1663 -
1622931080.2831233-CDS-H-elongata_contig68561:2407..25631622931080.2831233-CDS-H-elongata_contig68561:2407..2563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 2408..2563 -
1691679689.7940302-CDS-H-elongata_contig68561:2407..25631691679689.7940302-CDS-H-elongata_contig68561:2407..2563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 2408..2563 -
1622931080.309197-CDS-H-elongata_contig68561:3091..31751622931080.309197-CDS-H-elongata_contig68561:3091..3175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 3092..3175 -
1691679689.808331-CDS-H-elongata_contig68561:3091..31751691679689.808331-CDS-H-elongata_contig68561:3091..3175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig68561 3092..3175 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig68561.14493.1

>prot_H-elongata_contig68561.14493.1 ID=prot_H-elongata_contig68561.14493.1|Name=mRNA_H-elongata_contig68561.14493.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
RQNKWRGTYHNIIFGFFILATSQVLILQGDITTLSGVYTFAFLGVMTLFS
IGTILLKFKRPSLPREVTVSYGGTIFGILCVITAFMGNLISKPSVMSWFL
IYFIAVGLVIVLVFQRVRLLKILLKITESIGIGPISSSIKEQIYELQDTP
FVFFCKQADLYVINKAILYVRDNEQTNRLLVVHVSTDRESGTIKTLSKQI
EMFDTMYPRIKISLLTVTGSFSPALIDWLST*
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mRNA from alignment at H-elongata_contig68561:251..3175-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig68561.14493.1 ID=mRNA_H-elongata_contig68561.14493.1|Name=mRNA_H-elongata_contig68561.14493.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2925bp|location=Sequence derived from alignment at H-elongata_contig68561:251..3175- (Himanthalia elongata Himel1 dioecious)
CGGCAGAACAAATGGCGAGGGACCTATCATAACATCATCTTCGGGTTTTT TATTCTCGCTACGAGCCAAGTGCTAATCCTCCAGGTACTCTGCGCACGAC GCTGTTTGCGATTTTAGGAGAGGACATGGTGGTGTTCCATAATATCGAGG CTTTCGTTCCGAAGTTATGTATTGTGGCTCAGAGTGTGCGGTATTGATGC TATGTACCTTACGACGGGCATGTTTTTCGCTTTTCATGAAAGCATCGTTT CCCCGGTAGTTTAAGGGCCGTTTTAAACATGCTAAAAAATATATATATTT TTTGAAATATCAAACATTTTAACATACCAAACGAGGCGTTTGTCACAATT TGGTGTCAAAAACTTGGAAGCGATTCACGGGCAAAAAGTGTGAGCGAGTT GCTTCTAATATTTGGTTGTTGTTTTTTTTAATATTTTGACGCAGTTTGAT TTTTTTTTAAATGTCAAATTTTTCGACATTTTAATATCTCTCGCAATTGG GTGCCTAGTCTATGGCATCGTCTTCAGGCGATTGCTACGTTATCCCCCGG GAATGCTTTATCAGCGCCGGGCGGGGTGAACTTGGCCGTTTTTTTGCCCC GTGACGCTCTAGGGGGATATCACCACCTTGTCGGGGGTGTATACGTTCGC GTTCTTGGGCGTAATGACGCTCTTTTCGATTGGCACTATTCTGCTCAAGT TCAAGAGGCCATCGCTTCCGAGGGAAGTTACGGTCAGCTACGGGGGCACA ATCTTCGGCATCCTCTGCGTGAGTCTTAACGTCAAAACAACAAAAGTTTC ATTTGCTTATCCCCCAGATGTCCGTGTACCCAGAGGTTATGAGGAGGTCG CGAGGGTACCTACTGTATGCTTTCAAGTGCTTATCCCTATTGTTGCGTCG ATCGCAGTTCTCTTAAGTCGCTTTTCAGAGGCGTAGCTCGTGATGCTGTC GCATAGTCTGTACGTCCAAAGATCCAGCCAATCAGCAGAGATAAGCGGCA ATACAGGTTAGATTTTCGGATAATACCGCGCAAGTTATTCGCTTGCTCAT CGAGGCTCATAACCTGTTGGGGACATAATTCAAATATTTGCCGCTTCAGC GGATTGAGCACAGAGGACCAGTCCGGGGTTTGCTCGTGTAGGTCTAGATG ACTGTTGATCGTGTAGGTTTAGATGGCTGTTGATAAGTACTTACATCTTT ATGAAATGATTCCGAAGGTGATGAAAGCGCAAAGTACTCGAGCAAGGCAT TTAAATAGCTCTCTATCTACAACGGTATCATAAAACGATAGAGCCTGTCG TGCTGTACAAAATGAGCGTGATGGCATTCTAGAAAACATTTTAAATGATA AATGCATTCCGCTTCCTTCCTCTGACCAAGCAGCCCGGGGTAGGGCACAT GACTTGGGCACGTACGCCCCTATAGTTGTTTGGCTGGTTCATTCACGAGC TTACGATTAGCCCCACAGAGCGCTTGCTGCCCATTGCCCCTACGCTGGTT CCTTCCTGGTAGGTAATCACGGCATTTATGGGCAACCTCATCAGCAAGCC AAGTGTGATGTCGTGGTTTCTCATTTACTTCATCGCCGTAGGGTTAGTTA TTGTGCTTGTCTTTCAAAGGGTACGACTACTCAAGATTCTTCTCAAGATT ACGGAATCGATCGGAATCGGTGGGTGATTGGGTGATGATATATCGGTATC GGTATCGGTGGGTGATGATATTGTTCAATGTACAGTAGATGTTACTCGTT CGCCCTGTTGGCCGCATTCCCGTGTGTAGGCATTGCCCCTGCCCTGAGTT CCTTTTTTTTATTTTAGGCATATTTTAAATGTCCAATATATTTCAGTACC CTGAGCTTGTTGTAAAAAAAGGGCAGCGCGCGGCGTAGTTATGAAGTGCG CAACATCTGAGCTTGCTCCCTAATAAATTAGTATTTAGCACTTCGTAGAG AACGGCACTTTTGATCACGTGAAAAAATATAATGGTAGCTTGCCCTGGCT TGTGCTATTTTTTCCCATTAGCGACATTTCCACATGGACATCGTATCCAG CCACAGCCTCCTTTACATGCCATCTGTACCGAAGGGGGGGGGGGTTGAAA AAAAGAGGCGTACCATATTTGGTCCATAGGATTGCCTGAATAGGCTTTGC ACCCGTTACTCATGCTACCTTGAAGACTACTGGCTCAGTGCCGGCGAACT CTCGATACAGTAGTGAACCGACATCGGTACGCAATCTCGTGACCTGATGC ACTCGGGATTGACCCAATGGGGGTTGATGGTACAGATAGACGCCGTCGCG GAAAGCCGTCGCGGAAAGCGAGGAACCCAACAGTAACCACCATACTGACG CAGGACGGAACGGCCCAGCTTGTCTTGCGAGGCCTAAATCTCAGGCGCAA ACAGGGACAGAAAAAAACCATTTTCCCTGTGTATCAAATTGCATTAAATC GCGCAAACCGGCATGACACGTAAGGGGGCGCCACGCCGGTTTGTGAATAC TCCCCCCTTTATGGGGAGCAGAACCACAGACACACTCATAATCCAATGGC TCGGCTCGAGCTGGGATCGATCCTGAGGCGTACCTTCCCTTGTGCTTCTG TCGCATTGTGCAACTCCTATGGTTAGGGCCCATTTCCTCAAGCATCAAAG AGCAGATCTACGAGCTCCAGGACACGCCCTTTGTGTTCTTTTGCAAGCAG GCCGACTTGTACGTGATTAACAAGGCCATCCTGTACGTGAGGGACAACGA GCAGACCAACCGCCTGCTGGTGGTACACGTGTCAACAGACCGTGAAAGCG GCACTATCAAGACCCTGAGCAAGCAAATCGAAATGTTCGACACCATGTAC CCCAGGATCAAGATTTCTCTGCTCACGGTCACGGGAAGTTTTAGCCCGGC TCTCATCGACTGGTTGTCGACGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig68561:251..3175-

>mRNA_H-elongata_contig68561.14493.1 ID=mRNA_H-elongata_contig68561.14493.1|Name=mRNA_H-elongata_contig68561.14493.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig68561:251..3175- (Himanthalia elongata Himel1 dioecious)
CGGCAGAACAAATGGCGAGGGACCTATCATAACATCATCTTCGGGTTTTT
TATTCTCGCTACGAGCCAAGTGCTAATCCTCCAGCGGCAGAACAAATGGC
GAGGGACCTATCATAACATCATCTTCGGGTTTTTTATTCTCGCTACGAGC
CAAGTGCTAATCCTCCAGGGGGATATCACCACCTTGTCGGGGGTGTATAC
GTTCGCGTTCTTGGGCGTAATGACGCTCTTTTCGATTGGCACTATTCTGC
TCAAGTTCAAGAGGCCATCGCTTCCGAGGGAAGTTACGGTCAGCTACGGG
GGCACAATCTTCGGCATCCTCTGCGGGGATATCACCACCTTGTCGGGGGT
GTATACGTTCGCGTTCTTGGGCGTAATGACGCTCTTTTCGATTGGCACTA
TTCTGCTCAAGTTCAAGAGGCCATCGCTTCCGAGGGAAGTTACGGTCAGC
TACGGGGGCACAATCTTCGGCATCCTCTGCGTAATCACGGCATTTATGGG
CAACCTCATCAGCAAGCCAAGTGTGATGTCGTGGTTTCTCATTTACTTCA
TCGCCGTAGGGTTAGTTATTGTGCTTGTCTTTCAAAGGGTACGACTACTC
AAGATTCTTCTCAAGATTACGGAATCGATCGGAATCGGTAATCACGGCAT
TTATGGGCAACCTCATCAGCAAGCCAAGTGTGATGTCGTGGTTTCTCATT
TACTTCATCGCCGTAGGGTTAGTTATTGTGCTTGTCTTTCAAAGGGTACG
ACTACTCAAGATTCTTCTCAAGATTACGGAATCGATCGGAATCGGGCCCA
TTTCCTCAAGCATCAAAGAGCAGATCTACGAGCTCCAGGACACGCCCTTT
GTGTTCTTTTGCAAGCAGGCCGACTTGTACGTGATTAACAAGGCCATCCT
GTACGTGAGGGACAACGAGCAGACCAACCGCCTGCTGGTGGTACACGTGT
CAACAGACCGTGAAAGCGGCACTATCAAGACCCTGAGCAAGCAAATCGAA
ATGTTCGACACCATGTACCCCAGGATCAAGATTTCTCTGCTCACGGTCAC
GGGAAGTTTTAGCCCGGCTCTCATCGACTGGTTGTCGACGTGAGGCCCAT
TTCCTCAAGCATCAAAGAGCAGATCTACGAGCTCCAGGACACGCCCTTTG
TGTTCTTTTGCAAGCAGGCCGACTTGTACGTGATTAACAAGGCCATCCTG
TACGTGAGGGACAACGAGCAGACCAACCGCCTGCTGGTGGTACACGTGTC
AACAGACCGTGAAAGCGGCACTATCAAGACCCTGAGCAAGCAAATCGAAA
TGTTCGACACCATGTACCCCAGGATCAAGATTTCTCTGCTCACGGTCACG
GGAAGTTTTAGCCCGGCTCTCATCGACTGGTTGTCGACGTGA
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