mRNA_H-elongata_contig6839.14467.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6839.14467.1
Unique NamemRNA_H-elongata_contig6839.14467.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 1.070e-79
Identity = 130/202 (64.36%), Postives = 157/202 (77.72%), Query Frame = 1
Query:    1 RQAVWMSAEEPANRAGFLTSYAALAAFASTAALPLAAIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 606
            R  V MSAE P++RA FLT+ AA+AA  S   LPL A+ADE       V LVTTKLGG+LEPFADVSKGYRLAKP+GWNR+DG +GEY VKMVDLVD +  ILL NSPVKSDT L+ +G    +G K+SK RD+E+V  RDR+TEGIRLYD+EFK   R EL+TL+VNK+KLW+L + CPEK+W++Q E  KT+VDSFLPRL
Sbjct:   33 RHTVRMSAEGPSDRAQFLTTSAAVAA--SAVMLPLVAVADEGETGSKQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A6V2XVF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVF7_HETAK)

HSP 1 Score: 150 bits (378), Expect = 1.050e-39
Identity = 75/182 (41.21%), Postives = 119/182 (65.38%), Query Frame = 1
Query:   64 AALAAFASTAALPLAAIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCP-EKSWKQQGEVLKTVVDSFLPRL 606
            AA  A  +TA +P+ A A+ E   R      T+++GG ++P+ DV+KG++L +P GW+ F    GEY VK VDLV++++TI +  +PVKS T++  +G++ ++G K++ +R  E++   D+ITE IR Y +EFK    +E+  L++NK +LWSL+   P EKSW ++ E  + V  SFLPRL
Sbjct:   51 AAATAAVATATVPIVAFAEPEQVER-----ATSRMGGTMDPYNDVNKGFKLMRPGGWDAFSNAPGEYDVKFVDLVNKAETITVSTTPVKSSTSIDALGEVGAVGAKLAASRGAELLSANDKITENIRAYTFEFKKGSSYEIYQLSINKGRLWSLSCVAPSEKSWAKRKEAYRVVAGSFLPRL 227          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7R9Y8Q4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.770e-32
Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 1
Query:  145 VPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPR 603
            VPL  ++LGG LEP++D+ +G+RL  P  WN+F+   G Y V+ VDLV+  + +LL  SPVKSD +L  +G  + +G K++ +R+ + V    R TEG+  YD+EF+SK  HE  TLA+ +++LW+L++    K+W ++      +  SF+P+
Sbjct:   71 VPLSKSRLGGVLEPYSDIQRGFRLMAPYSWNKFENGEG-YDVRWVDLVNVKENVLLRTSPVKSDASLEAIGTPEKIGEKLAASREAQCVSATARQTEGLLFYDFEFESKAAHEYATLAIARNRLWNLSVVTEPKNWSKRKASFDGIRKSFIPK 222          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S2FXS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXS9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 3.600e-31
Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 1
Query:  160 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNS-PVKSDTT-LTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 606
            TK+GG LEP+ DV KG+R+ KP GWN+FD   G Y +K  DLV  ++ +LL  + PVKS TT + M+GD+  +G K+ K +  E++  +    EGI  Y +EFK++D H+L  L VNK KLWS+  S P+K W +  E+    + SF+P L
Sbjct:   16 TKMGGLLEPYNDVGKGWRINKPSGWNQFDTLPGVYEMKWEDLVATNREVLLVTTTPVKSTTTSVDMLGDVTEVGRKLGKGKK-ELLSAKAVEKEGILFYMWEFKTEDGHQLLQLCVNKGKLWSVDASAPDKRWSKVSELYTNSLLSFMPTL 165          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S4BPW2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPW2_CHRCT)

HSP 1 Score: 124 bits (312), Expect = 4.180e-30
Identity = 54/148 (36.49%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  160 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPR 603
            +++GG LEPF DV KGY+L KP+ WN+FD + G Y VK  D+++  + + + +SPV + T+++ +GD+ ++G K +K+R+ E++  ++R  +G  +Y +E K +  HE   LAVN+ KL+ ++     K W ++ E+ K ++ SF+P+
Sbjct:   74 SRMGGALEPFIDVQKGYKLYKPVAWNQFDADPGVYDVKFQDVIEPFEIVQVSSSPVTTATSVSALGDVSAVGVKFAKSRNAELISAKERDADGSLVYTFELKGEMYHEYLALAVNRGKLFRVSTVTSNKRWPKREELFKNIILSFVPK 221          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S4JXM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JXM0_9EUKA)

HSP 1 Score: 124 bits (310), Expect = 7.150e-30
Identity = 65/175 (37.14%), Postives = 108/175 (61.71%), Query Frame = 1
Query:   82 ASTAALPLA--AIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLP 600
            A+ AAL LA  A A+EE  SRL         GG LEPF D+ KGY+L KP GW ++  + G Y VK  D+++  +++++ +SPV + T+++ +GD+ ++G K +K+R+ E+VK  +R  +G  +Y  E K    HEL TL++N+ KL+ +  +   K W ++ E+   ++ SF+P
Sbjct:   50 AAVAALGLASSASAEEETFSRL---------GGLLEPFVDIQKGYKLYKPSGWTQYSIDPGVYDVKFADIIEPFESVIVSSSPVATATSISALGDLPTVGAKFAKSRNAELVKATERTADGNLVYTLELKGDVYHELLTLSINRGKLFRVTATATNKRWSKRSELYSNIMLSFVP 215          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S0NW19_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW19_9EUKA)

HSP 1 Score: 122 bits (305), Expect = 4.090e-29
Identity = 71/191 (37.17%), Postives = 109/191 (57.07%), Query Frame = 1
Query:   43 AGFLTSYAALAAFASTAALPL----AAIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPR 603
            AG ++    LAA A+T  L +    AA ADE             K+GG LEP+ DV KGY+L +P  WN+FD + G Y VK  D+++  +T+ + +SPV S T+++ +GDI S+  K +K+R+ E+V   +R  +G  LY  E +    HE   L +N+ KL+ L+     K W ++ E+ K VV SF+P+
Sbjct:   39 AGGISRRQQLAAAAATGVLSVFGTHAASADETFN----------KMGGALEPYIDVQKGYKLYRPTAWNQFDTDPGVYDVKFQDVINSFETVQVSSSPVSSATSISALGDIASVAAKFAKSRNAELVSSSERDADGSLLYSMELQGDMYHEYLALTINRGKLFRLSTVTSNKRWSKRQELYKNVVLSFVPK 219          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S0W0N6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0N6_9CRYP)

HSP 1 Score: 118 bits (295), Expect = 7.490e-27
Identity = 55/153 (35.95%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  160 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDR----HELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 606
            +++GG LEPF D++KG++L KP GWN+FD   GEY +K  DLV++S+ +++    V++  ++  +GD+++LG K++  +  E+V    R  +GI  Y + FK  +      E+  L VNK +LWS+  +  EK W ++ +    V+ SF+P+L
Sbjct:  152 SRMGGLLEPFKDINKGFQLLKPRGWNQFDAAPGEYDIKWEDLVEKSEMVMVGTKEVQTAKSVDALGDVEALGKKLAAKKKAELVSAEKREVDGILFYKFIFKQGNEKVGAREVYQLCVNKGRLWSVTATTSEKRWAKREKFYDNVMMSFVPKL 304          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A1X6NNU3_PORUM (PsbP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNU3_PORUM)

HSP 1 Score: 112 bits (281), Expect = 1.520e-25
Identity = 54/147 (36.73%), Postives = 89/147 (60.54%), Query Frame = 1
Query:  166 LGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 606
            LG  +E + D++KG+ + +P GWN+F+  AG+Y +K  DL+   + I +  +PV    T+  +G   ++G K++K+R  E+V    +  EG+  Y  E KS   H+L TL VNKSKL+S+ +S  E  W ++ ++L+ V +SF P L
Sbjct:   86 LGSSVEVYKDLNKGFTILRPQGWNQFEATAGQYDIKWQDLIQPLEIITVLTTPVGKGKTVADIGTPDAVGTKLAKSRRAELVSAVSKEEEGLTYYTVELKSASVHQLTTLVVNKSKLYSVNVSSAEGKWSKREKLLRGVAESFKPSL 232          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S2FXI9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FXI9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.700e-25
Identity = 57/150 (38.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query:  163 KLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRS-KTILLYNSPVKSDT-TLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 606
            + GG LEP++D+++G+R+ KP  WN+FD   G Y +K  DLV  + + I+L  SPVKS T ++  +G ++ +G K++K RD +++  +    EGI  Y ++ +    H+L TL V K KLW +  S PE  W + G + + V  SF+P+L
Sbjct:   34 RAGGLLEPYSDITRGWRILKPSTWNQFDQIPGTYDMKWEDLVSLNYQQIILTTSPVKSTTVSVDALGPVEEVGLKLAKTRDAKLLSAKAFTKEGILFYLFDLQGPAVHQLLTLCVFKGKLWKVDASAPETRWAKTGPLYEKVAASFMPKL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LJF7_ECTSI1.070e-7964.36Photosystem II oxygen evolution complex protein Ps... [more]
A0A6V2XVF7_HETAK1.050e-3941.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9Y8Q4_9STRA2.770e-3239.87Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2FXS9_9STRA3.600e-3144.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4BPW2_CHRCT4.180e-3036.49Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4JXM0_9EUKA7.150e-3037.14Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S0NW19_9EUKA4.090e-2937.17Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0W0N6_9CRYP7.490e-2735.95Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A1X6NNU3_PORUM1.520e-2536.73PsbP domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S2FXI9_9STRA1.700e-2538.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6839contigH-elongata_contig6839:6463..8464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.1
Seed ortholog evalue4.2e-64
Seed eggNOG ortholog2880.D8LJF7
Preferred namePSBP3
KEGG koko:K02717
KEGG Pathwayko00195,ko01100,map00195,map01100
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0009579,GO:0031977,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044436,GO:0044444,GO:0044464
EggNOG free text desc.photosynthesis
EggNOG OGs2QU2U@2759,COG0459@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionPhotosystem II oxygen evolution complex protein PsbP
Ec32 orthologEc-06_010000.1
Exons4
Model size1138
Cds size594
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6839.14467.1prot_H-elongata_contig6839.14467.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6839 6478..7935 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931077.4113548-UTR-H-elongata_contig6839:6462..64771622931077.4113548-UTR-H-elongata_contig6839:6462..6477Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6839 6463..6477 +
1691679688.6131918-UTR-H-elongata_contig6839:6462..64771691679688.6131918-UTR-H-elongata_contig6839:6462..6477Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6839 6463..6477 +
1622931077.5101132-UTR-H-elongata_contig6839:7935..84641622931077.5101132-UTR-H-elongata_contig6839:7935..8464Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6839 7936..8464 +
1691679688.6608508-UTR-H-elongata_contig6839:7935..84641691679688.6608508-UTR-H-elongata_contig6839:7935..8464Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6839 7936..8464 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931077.431366-CDS-H-elongata_contig6839:6477..66061622931077.431366-CDS-H-elongata_contig6839:6477..6606Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 6478..6606 +
1691679688.6241736-CDS-H-elongata_contig6839:6477..66061691679688.6241736-CDS-H-elongata_contig6839:6477..6606Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 6478..6606 +
1622931077.451461-CDS-H-elongata_contig6839:6912..71101622931077.451461-CDS-H-elongata_contig6839:6912..7110Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 6913..7110 +
1691679688.6323295-CDS-H-elongata_contig6839:6912..71101691679688.6323295-CDS-H-elongata_contig6839:6912..7110Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 6913..7110 +
1622931077.4786384-CDS-H-elongata_contig6839:7412..75201622931077.4786384-CDS-H-elongata_contig6839:7412..7520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 7413..7520 +
1691679688.6404092-CDS-H-elongata_contig6839:7412..75201691679688.6404092-CDS-H-elongata_contig6839:7412..7520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 7413..7520 +
1622931077.4943893-CDS-H-elongata_contig6839:7776..79351622931077.4943893-CDS-H-elongata_contig6839:7776..7935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 7777..7935 +
1691679688.64939-CDS-H-elongata_contig6839:7776..79351691679688.64939-CDS-H-elongata_contig6839:7776..7935Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6839 7777..7935 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6839.14467.1

>prot_H-elongata_contig6839.14467.1 ID=prot_H-elongata_contig6839.14467.1|Name=mRNA_H-elongata_contig6839.14467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MSAEEPANRAGFLTSYAALAAFASTAALPLAAIADEEVRSRLVVPLVTTK
LGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLY
NSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFK
SKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL*
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mRNA from alignment at H-elongata_contig6839:6463..8464+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6839.14467.1 ID=mRNA_H-elongata_contig6839.14467.1|Name=mRNA_H-elongata_contig6839.14467.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2002bp|location=Sequence derived from alignment at H-elongata_contig6839:6463..8464+ (Himanthalia elongata Himel1 dioecious)
CGGCAAGCAGTCTGGATGTCAGCGGAGGAGCCGGCGAACAGGGCAGGATT CCTGACTTCTTACGCGGCCCTCGCCGCCTTTGCCTCTACCGCAGCGCTGC CCTTGGCAGCTATCGCAGACGAGGAGGTGCGTTCGAGGCTGGTTGTACGC TGCCCCTCAGCCACCTCTGTGGAGCACTAAATTCGAAATGTGTATACAGT GCAGCTGAACTTGAAATATAAAGAAAAGAGCGAGCACACGCGGGCCATGG AACATACTCTCACTTTTGTAGAGAAAATAATCCATGGTACTCGATATTAT TTTCCCGTGATGCATCATTATTAGCAGGAGATATCATCTACTACGTTCAG CCAGCCTCCTTGGCCATATTCCTTCATATTATTATAGTGCTAAATCAAAG TTTCGTCCCTCCCCCAGGCGACTACCGTGACCGTCTCGGAACCGGAAAAG GTACCCTTGGTGACCACCAAACTCGGAGGCCAGCTAGAACCTTTTGCGGA CGTGTCCAAGGGCTACAGGCTGGCCAAACCAATCGGTTGGAACCGTTTCG ACGGCGAAGCGGGTGAATACGCCGTCAAAATGGTGGATCTTGTCGACCGT AGCAAGACGATCCTGCTTTATAACTCTCCCGTCAAGTCGGACACAACGGT GAGTTTCACAAAGAGATTTTAGTGATGCGCTACGACATGTTAAAGGCGTT CGGGTCGCACTCTCTTTCCGCGATTTCAATTTTTCTTCCGACGGCGAAAC GGTCACCGCGCGCGATGTCGCACAAGCGTCCTCTTCGGCCTTGAATTGTT TGAGTTTCGGTATTATCTGTCCCCATACCGTTAAGCGGATGGAGGCGTCG GGTGGTAGTCTTTCGGTGAATCGCTGTGGTGTTGACCCTCCGAAACCGTT CTAAACGCTCATCATGTTGTTCTTGTGCGTTGATCGCGTTACCGCCACAG CTGACAATGGTAGGGGATATCCAATCTCTCGGGAATAAGATTTCCAAGAA CAGGGACTTAGAAATGGTCAAGATGCGAGACCGCATCACAGAAGGCATCC GACTCTACGTGAGTGATGCGCGGTGATCGGCGAGGCGTTCGTTCGATCAG GTGTTTGGATCATTTATCGATCAGCCGCCTGTGCTTGAAAGCCAGCGGTC GCCTCTAGGAACATCACCATGATTTGCCATTAGCCTTGGTGCGTTGCTTG TATGCTGTTGGGTTATGCGCACTGAGATCCGCCGGGAGGCTTGCGTGTAA GCCCTCTTAGGGAGTAAATAACACGCTGAATGCTCGTATTTTTCGCGGTC CCCGTTCACGCCAGGACTACGAGTTCAAATCCAAGGATCGCCACGAGCTG AGAACATTGGCGGTCAACAAGAGCAAACTGTGGAGCCTCGCGATATCGTG CCCAGAGAAATCATGGAAGCAACAGGGAGAGGTGCTCAAGACCGTTGTCG ACTCCTTCCTGCCTCGACTGTAGAGGGCCGTGAGGCCCCCTTGTTGTTCT TCCTTCGCCCGCCAAAATGGCGCCACCGAGATCACAGAAAGTATCGGAGC GTGATGTATTAGACTAGATACTTGGTAGCACTGGTTTCTTAGGCTGAAAA AAAAAAGATTTGTTGTGTGGGGGTAGTATTGTTCGTAGTCAAGCAGTCAG ATGCCGGAGATCGCGAGGCCTTCGCCGTGAGTGCGAGAGCTGGGTTGCTC AAGAGATCCTAGGAATATTTTCCTGTGGTTGTTTTGCGAGTGGTCCTTCT GCCACCGAATGAGCTAGTCGCATCGAAATGTCGCAAAGGGAAGCGCAGCC ACTGAAGTGTCAGCGAAGGCCGACACCTCCTCCCTCCTCATGTCGGCGTG ACTAACAGTCGCGACGATTTTCATGCCGCAACGTGTCTCGAACGTTCTCG TTACCCCACAAGTGTTCTTCTTGTCCTGGTGGCGCAAGGAGTTACGGCAC GGCGAAGTCATTGAACCGACAGAAGCCAGCCTTCAAACACGCGTGGGTGA AA
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Coding sequence (CDS) from alignment at H-elongata_contig6839:6463..8464+

>mRNA_H-elongata_contig6839.14467.1 ID=mRNA_H-elongata_contig6839.14467.1|Name=mRNA_H-elongata_contig6839.14467.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig6839:6463..8464+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGCGGAGGAGCCGGCGAACAGGGCAGGATTCCTGACTTCTTACGC
GGCCCTCGCCGCCTTTGCCTCTACCGCAGCGCTGCCCTTGGCAGCTATCG
CAGACGAGGAGGTGCGTTCGAGGCTGGTTATGTCAGCGGAGGAGCCGGCG
AACAGGGCAGGATTCCTGACTTCTTACGCGGCCCTCGCCGCCTTTGCCTC
TACCGCAGCGCTGCCCTTGGCAGCTATCGCAGACGAGGAGGTGCGTTCGA
GGCTGGTTGTACCCTTGGTGACCACCAAACTCGGAGGCCAGCTAGAACCT
TTTGCGGACGTGTCCAAGGGCTACAGGCTGGCCAAACCAATCGGTTGGAA
CCGTTTCGACGGCGAAGCGGGTGAATACGCCGTCAAAATGGTGGATCTTG
TCGACCGTAGCAAGACGATCCTGCTTTATAACTCTCCCGTCAAGTCGGAC
ACAACGGTACCCTTGGTGACCACCAAACTCGGAGGCCAGCTAGAACCTTT
TGCGGACGTGTCCAAGGGCTACAGGCTGGCCAAACCAATCGGTTGGAACC
GTTTCGACGGCGAAGCGGGTGAATACGCCGTCAAAATGGTGGATCTTGTC
GACCGTAGCAAGACGATCCTGCTTTATAACTCTCCCGTCAAGTCGGACAC
AACGCTGACAATGGTAGGGGATATCCAATCTCTCGGGAATAAGATTTCCA
AGAACAGGGACTTAGAAATGGTCAAGATGCGAGACCGCATCACAGAAGGC
ATCCGACTCTACCTGACAATGGTAGGGGATATCCAATCTCTCGGGAATAA
GATTTCCAAGAACAGGGACTTAGAAATGGTCAAGATGCGAGACCGCATCA
CAGAAGGCATCCGACTCTACGACTACGAGTTCAAATCCAAGGATCGCCAC
GAGCTGAGAACATTGGCGGTCAACAAGAGCAAACTGTGGAGCCTCGCGAT
ATCGTGCCCAGAGAAATCATGGAAGCAACAGGGAGAGGTGCTCAAGACCG
TTGTCGACTCCTTCCTGCCTCGACTGTAGGACTACGAGTTCAAATCCAAG
GATCGCCACGAGCTGAGAACATTGGCGGTCAACAAGAGCAAACTGTGGAG
CCTCGCGATATCGTGCCCAGAGAAATCATGGAAGCAACAGGGAGAGGTGC
TCAAGACCGTTGTCGACTCCTTCCTGCCTCGACTGTAG
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