mRNA_H-elongata_contig67942.14407.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67942.14407.1
Unique NamemRNA_H-elongata_contig67942.14407.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE)

HSP 1 Score: 293 bits (749), Expect = 1.680e-98
Identity = 145/178 (81.46%), Postives = 165/178 (92.70%), Query Frame = 1
Query:    1 MSITRTGSIDPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIGD 534
            MS++R GSIDPFR AMH+VFDSMERDLMAPSGMSSRF T D PG S++L SA+P++G +GGLGMNLDFHET++G+ELSADLPGMKKEDI VDID+ESGVLTVTGER+QEREEKSEGDNEQRKYHF+ERSYGKTTRSVRLPDTA  SKASA Y++GVLK+NFPKREP S+RR+QIPIGD
Sbjct:    1 MSLSRAGSIDPFRRAMHDVFDSMERDLMAPSGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGD 178          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.550e-55
Identity = 94/165 (56.97%), Postives = 123/165 (74.55%), Query Frame = 1
Query:   46 MHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTV---GGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 531
            +++VF S+ER+++AP G++SRFPTT        +F   PT     G   LGM+LDFHET +GFEL ADLPGMKKED+++D+D ESGVLTV+GER+ E+EEK +G +  RKYHFVERSYGKT+RSVRLP+ AD + A+A   DGVL + FPK+E   S R +IP+G
Sbjct:   20 INDVFGSIEREMLAPWGLASRFPTTRD------MFPTFPTSLFGDGSRSLGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLG 178          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 2.550e-47
Identity = 86/153 (56.21%), Postives = 111/153 (72.55%), Query Frame = 1
Query:   79 LMAPSGMSSRFPTTDS--PGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 531
            ++AP G++ RFPT     P  S SLF       G   L MNLDFHET +GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ +REEK +  +  RKYHFVERSYGKT+RSVRLP+ A+ + A+A   DGVL + FPK+E  +S R +IP+G
Sbjct:    1 MLAPWGLAFRFPTARDMVPSVSSSLFRD-----GSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 148          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 2.890e-46
Identity = 93/202 (46.04%), Postives = 120/202 (59.41%), Query Frame = 1
Query:   52 EVFDSMERDLMAPSGMSSRFPTTDS------------------------------------------PGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 531
            +VF S+ER+++AP G++SRFPT                                             P  S SLF       G   L MNLDFHET +GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ EREEK +  +  RKYHFVERSYGKT+RSVRLP+ A+ + A+A   DGVL + FPK+E  +S R +IP+G
Sbjct:    7 DVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRD-----GSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 203          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A0S7YIY3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium SG8_13 TaxID=1703398 RepID=A0A0S7YIY3_9DELT)

HSP 1 Score: 100 bits (250), Expect = 1.640e-23
Identity = 63/167 (37.72%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   28 DPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPI 528
            DPFR  M ++FD   R L  P   S     T                   G     +D  ET   F + A++P ++KED+ V +DN  G+LT+ GER+QE+EEK+      +KYH VER YG  TRS  LPD  D SK +AA+ DG+L L  PK E +  + I++ +
Sbjct:    7 DPFRE-MEDMFDRYSRALSFPRRGSQEVMAT-------------------GDWAPRVDIAETDREFTIKAEIPDVRKEDVKVTVDN--GILTIKGERKQEKEEKN------KKYHRVERWYGSFTRSFTLPDNVDESKITAAFKDGMLNLTIPKTEASKPKAIEVQV 145          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A0D2UFN1_CAPO3 (Small HspC2 heat shock protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFN1_CAPO3)

HSP 1 Score: 99.8 bits (247), Expect = 1.030e-22
Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 1
Query:  196 LDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQI 522
            +D HE+S+G+ +SADLPGMKK++I+V+ +N  G+LT++GE++QE +EKS+       YH  ERS G+ +R++RLP  AD SKA+A Y DGVL L+  KR   +  RI I
Sbjct:   76 VDVHESSDGYHISADLPGMKKDEISVNCEN--GILTISGEKKQE-QEKSDHT-----YHVFERSVGRVSRTLRLPRDADSSKANAKYTDGVLTLDIAKRALPAGSRIAI 176          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A3C1Z549_9BACT (Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=1234 RepID=A0A3C1Z549_9BACT)

HSP 1 Score: 98.6 bits (244), Expect = 1.470e-22
Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  154 AIPTVGGKGGLGMNL----------DFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 531
            A P  GG  G G  +          D  ET   + + A+LP +K+ED+ V +  E GVLT+ GER+QE+EEK       +KYH VERSYG+  R+  LPDT D SK  A Y DG+L L+ PK E    ++I++ + 
Sbjct:   24 ANPASGGSVGQGKEVMTVADWTPTVDISETEAEYAIKAELPEVKREDVKVTV--EDGVLTIQGERKQEKEEKG------KKYHRVERSYGRFVRTFTLPDTVDESKVKAEYADGILHLHLPKSEKAKPKQIEVKVA 151          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: UPI0008340C1D (Hsp20/alpha crystallin family protein n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0008340C1D)

HSP 1 Score: 99.0 bits (245), Expect = 2.970e-22
Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 1
Query:   13 RTGSIDPFRHAMHEVFDSMERDLMAPSG--MSSRFPTTDSPGRSISLFSAIPTVGGKGGLGM--NLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPT--SSRRIQI 522
            R G +   R  M+ +FD      +AP+G   +      D  GR    F  +     +GGL      D  ET E +EL  DLPGMKK+D+ VD  +  G+LT++GERR ERE++ +G      Y+  ERSYG   RS R+P++ D    +A + DGVL +  PK E +  +SRRI I
Sbjct:   23 RGGGLSSLRSEMNRLFDRFGGRGVAPAGGRRTGDLAAFDPFGRD--PFELLENALAEGGLESFGRADLSETDEAYELQVDLPGMKKDDVAVDYSD--GILTISGERRDEREDERKG------YYLSERSYGAYRRSFRVPESVDHDSIAARFSDGVLTVKLPKTEESRETSRRIDI 188          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: D8PFX6_9BACT (Heat shock protein, Hsp20 family n=5 Tax=Nitrospira TaxID=1234 RepID=D8PFX6_9BACT)

HSP 1 Score: 97.4 bits (241), Expect = 4.090e-22
Identity = 63/169 (37.28%), Postives = 90/169 (53.25%), Query Frame = 1
Query:   28 DPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSI-SLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 531
            DPFR  + E+ D + R +  PS       T    G+ + ++    PTV          D  ET   + + A+LP +KKED+ V +  E  VLT+ GER+QE+E+K       +KYH +ERSYG+  RS  LPD+ D SK  A Y DG+L L+ PK E    ++I + I 
Sbjct:    7 DPFRE-LEEMSDRLNRMIARPST-----GTPAGQGKEVMTVADWTPTV----------DISETESEYAIKAELPEVKKEDVKVTV--EDAVLTIQGERKQEKEDKG------KKYHRIERSYGRFVRSFTLPDSVDESKVRAEYADGILHLHLPKSEKAKPKQIDVKIS 151          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A1W9GA54_9BACT (Heat-shock protein Hsp20 n=1 Tax=Nitrospira sp. SG-bin2 TaxID=1827377 RepID=A0A1W9GA54_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 5.320e-22
Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 1
Query:   28 DPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 531
            DPFR  + E+ D + R    P+         +     +++   +PTV          D  E+   + + A+LP +KKED+ V +  E GVLT++GERRQE+EEK       +KYH VERSYG   RS  LP++ D S   A Y DGVL L+ PK E    + I++ +G
Sbjct:    7 DPFRE-LEEMSDRLNRAFARPA-------LRNGGKEHLTVADWVPTV----------DISESEGEYLIKAELPEVKKEDVKVSV--EDGVLTLSGERRQEKEEKG------KKYHRVERSYGSFVRSFSLPESVDESGVKAQYTDGVLNLHLPKTEKVKPKSIEVKVG 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B3VMZ8_FUCSE1.680e-9881.46Heat shock protein 20 n=2 Tax=Fucus serratus TaxID... [more]
D7FUU6_ECTSI1.550e-5556.97Small heat shock protein heat shock protein 20 n=1... [more]
A0A6H5KKF0_9PHAE2.550e-4756.21HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JFM4_9PHAE2.890e-4646.04HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A0S7YIY3_9DELT1.640e-2337.72SHSP domain-containing protein n=1 Tax=Deltaproteo... [more]
A0A0D2UFN1_CAPO31.030e-2249.54Small HspC2 heat shock protein n=1 Tax=Capsaspora ... [more]
A0A3C1Z549_9BACT1.470e-2241.18Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=... [more]
UPI0008340C1D2.970e-2238.07Hsp20/alpha crystallin family protein n=1 Tax=Halo... [more]
D8PFX6_9BACT4.090e-2237.28Heat shock protein, Hsp20 family n=5 Tax=Nitrospir... [more]
A0A1W9GA54_9BACT5.320e-2236.90Heat-shock protein Hsp20 n=1 Tax=Nitrospira sp. SG... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67942contigH-elongata_contig67942:1105..3221 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.7
Seed ortholog evalue7.5e-44
Seed eggNOG ortholog2880.D7FUU6
KEGG koko:K07200,ko:K13993
KEGG Pathwayko04068,ko04141,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,map04068,map04141,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.response to heat
EggNOG OGsCOG0071@1,KOG0710@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Hectar predicted targeting categoryother localisation
Exons3
Model size648
Cds size540
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67942.14407.1prot_H-elongata_contig67942.14407.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67942 1105..3113 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931071.379992-CDS-H-elongata_contig67942:1104..11421622931071.379992-CDS-H-elongata_contig67942:1104..1142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67942 1105..1142 +
1691679685.9887834-CDS-H-elongata_contig67942:1104..11421691679685.9887834-CDS-H-elongata_contig67942:1104..1142Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67942 1105..1142 +
1622931071.4033353-CDS-H-elongata_contig67942:1719..20461622931071.4033353-CDS-H-elongata_contig67942:1719..2046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67942 1720..2046 +
1691679685.9992514-CDS-H-elongata_contig67942:1719..20461691679685.9992514-CDS-H-elongata_contig67942:1719..2046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67942 1720..2046 +
1622931071.4217384-CDS-H-elongata_contig67942:2938..31131622931071.4217384-CDS-H-elongata_contig67942:2938..3113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67942 2939..3113 +
1691679686.0100222-CDS-H-elongata_contig67942:2938..31131691679686.0100222-CDS-H-elongata_contig67942:2938..3113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67942 2939..3113 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931071.4384086-UTR-H-elongata_contig67942:3113..32211622931071.4384086-UTR-H-elongata_contig67942:3113..3221Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67942 3114..3221 +
1691679686.019875-UTR-H-elongata_contig67942:3113..32211691679686.019875-UTR-H-elongata_contig67942:3113..3221Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig67942 3114..3221 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67942.14407.1

>prot_H-elongata_contig67942.14407.1 ID=prot_H-elongata_contig67942.14407.1|Name=mRNA_H-elongata_contig67942.14407.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MSITRTGSIDPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLF
SAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVL
TVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASA
AYLDGVLKLNFPKREPTSSRRIQIPIGDN*
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mRNA from alignment at H-elongata_contig67942:1105..3221+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67942.14407.1 ID=mRNA_H-elongata_contig67942.14407.1|Name=mRNA_H-elongata_contig67942.14407.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2117bp|location=Sequence derived from alignment at H-elongata_contig67942:1105..3221+ (Himanthalia elongata Himel1 dioecious)
ATGAGCATCACCCGTACCGGATCGATCGACCCCTTCAGGTGAGCAATGGC AAGTGGTGCTATGAATATTGTAACCTCTGCAGTAGTTTTTGTGTGGGAGG TCTTCATATGTTCCAGACTCGAACACAGTCGATGTTCTTCAGATGAAGCG GGCAGGCCTCACAAAGCATGTGCTCGCTTTGCTCTGAAGTCATATAGTAT CGTCGAATTGTACCTGCGATTCGTTTTGGAGAAATCCACTGGGGTCTACC CCCGTGTGGACTGTTTCGAGCTGAATCTTTGCTGTAGAAAAAGACCTACA GTCCAGCACTAATAATAGGTGCGAGAAAGATAAAGAATGAGTTATTTTCT GTCAAAAAAGCAACTACGATGCCCTCCCGCGAATCATGATTCTCCTATAG ATGGTGACATGATTGGCCCGCCCATCCGGAGTGCCTCACTCCAATCCGCA AGATCGCTGGATCTATCTAGTGTATTACCACAGATATATAGACTGAAGTT TTCCCATTCCATCAAGACTTACAAAATACAAGGGATATCCGCTCACAAAA CATTCCCCGCCGATCTCCCTTTCTCGCCCCGTTGCATGTCACGTATCACC CCATGTAACACACAGGCACGCCATGCACGAGGTATTCGACTCTATGGAGC GTGACCTCATGGCGCCGTCTGGAATGAGCTCCAGGTTCCCCACCACCGAC TCTCCCGGCCGCTCTATCAGCCTATTCTCCGCCATCCCCACAGTGGGCGG TAAAGGAGGTCTCGGGATGAACCTCGATTTCCATGAGACCAGCGAGGGCT TCGAGCTGAGCGCAGATCTCCCCGGTATGAAGAAGGAAGACATCACGGTG GACATCGACAACGAGTCCGGCGTCCTGACTGTGACAGGAGAACGCCGGCA GGAGAGGGAGGAGAAGAGCGAAGGCGACAACGAACAGCGCAAGTGAGTAA CTAATCCCCGCTGATTGTTCCGCGTTCTTTCCTTTCCCGCCTCAAACCAG CGCCCTCCACGGCGGGAGATGAAATCATTCGGTGTTGCACCCCTAAAACC ATCCAGGCGCATTCCACCGTTAATCGGGGGGTTTCTTTCGCTCTGAAGCA CCCAACACCATCGTCTAAAAAGTTGCCGAAATCAAAAACAGTTCGGCATT TTCATGGGCACCTCGGCAATCGATTGCGCCTGGCCGATTTGGGGTGGGTA GAGCAACTCAGAAAGTTGTTCGGCCAAAAATTCAGCTGGGCAGAGGCTCG ATCATGAACACCCCTGAAGCTGACAGTCAATTTGTTTGGATTTTGTTTAT AGATAATGTTGTTCCGTGCAATGTTAATATTGAAAAAAACGATTACGGAT TCGTGATCCCCACCCCAAAATTACCATACCCTGAAAAGTTTAGGTTGATC TAACGTTTTTTCAAGCCAGGGGATATTTCAGTTCATCCAGCTTTTTTGCG TTTAGCAGAATTTCCCCAGGGATACGCATAAAACCAGTTTAAGCTCGGCA ATAAAAGCAGGGAATGCTTCATAACCAGTCCCCACTAAAATTCCATGGCG CTTAGCCGCTGAAGGTGCCTATAGTATTTAGGTTCCGATGAGCAACGAAC GCTAGTTAGTACTACTATTATTGTGCGTAGTGATGGCATAATATTTTGGT TGGGTTCTGACATCTTTACTACCGTGGAAGGACGTTATACAACTTCGTTG GCGTGTCCACTTTGATGACTCTCTACCAAACCATGTAGCCCTCACAAGCT CGAACCAGCTCGAAAACTTCGCGTCCAAAGTGATTCCCGCAATCCTAACA GCCCTTTCGTGACTATCGTTATTTGAAACATCAGGTACCACTTCGTGGAG CGCTCCTACGGCAAGACCACCCGCTCCGTCCGCCTCCCAGATACGGCAGA CTTCTCAAAGGCTAGTGCGGCCTACCTCGACGGGGTCCTCAAGCTGAACT TCCCCAAGCGAGAGCCAACCTCCAGTCGCCGTATTCAGATCCCCATCGGT GATAACTGACGCCTCTTCTGCAAATGAATATAGCAGAGTCGTCGCTCGTG CAGCAAGCTCCGTCTTAGTGCGGGAGTATGATCAATATATATAGGAATTG ACATTCGAGAGAGCCCC
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Coding sequence (CDS) from alignment at H-elongata_contig67942:1105..3221+

>mRNA_H-elongata_contig67942.14407.1 ID=mRNA_H-elongata_contig67942.14407.1|Name=mRNA_H-elongata_contig67942.14407.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig67942:1105..3221+ (Himanthalia elongata Himel1 dioecious)
ATGAGCATCACCCGTACCGGATCGATCGACCCCTTCAGATGAGCATCACC
CGTACCGGATCGATCGACCCCTTCAGGCACGCCATGCACGAGGTATTCGA
CTCTATGGAGCGTGACCTCATGGCGCCGTCTGGAATGAGCTCCAGGTTCC
CCACCACCGACTCTCCCGGCCGCTCTATCAGCCTATTCTCCGCCATCCCC
ACAGTGGGCGGTAAAGGAGGTCTCGGGATGAACCTCGATTTCCATGAGAC
CAGCGAGGGCTTCGAGCTGAGCGCAGATCTCCCCGGTATGAAGAAGGAAG
ACATCACGGTGGACATCGACAACGAGTCCGGCGTCCTGACTGTGACAGGA
GAACGCCGGCAGGAGAGGGAGGAGAAGAGCGAAGGCGACAACGAACAGCG
CAAGCACGCCATGCACGAGGTATTCGACTCTATGGAGCGTGACCTCATGG
CGCCGTCTGGAATGAGCTCCAGGTTCCCCACCACCGACTCTCCCGGCCGC
TCTATCAGCCTATTCTCCGCCATCCCCACAGTGGGCGGTAAAGGAGGTCT
CGGGATGAACCTCGATTTCCATGAGACCAGCGAGGGCTTCGAGCTGAGCG
CAGATCTCCCCGGTATGAAGAAGGAAGACATCACGGTGGACATCGACAAC
GAGTCCGGCGTCCTGACTGTGACAGGAGAACGCCGGCAGGAGAGGGAGGA
GAAGAGCGAAGGCGACAACGAACAGCGCAAGTACCACTTCGTGGAGCGCT
CCTACGGCAAGACCACCCGCTCCGTCCGCCTCCCAGATACGGCAGACTTC
TCAAAGGCTAGTGCGGCCTACCTCGACGGGGTCCTCAAGCTGAACTTCCC
CAAGCGAGAGCCAACCTCCAGTCGCCGTATTCAGATCCCCATCGGTGATA
ACTGAGTACCACTTCGTGGAGCGCTCCTACGGCAAGACCACCCGCTCCGT
CCGCCTCCCAGATACGGCAGACTTCTCAAAGGCTAGTGCGGCCTACCTCG
ACGGGGTCCTCAAGCTGAACTTCCCCAAGCGAGAGCCAACCTCCAGTCGC
CGTATTCAGATCCCCATCGGTGATAACTGA
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