prot_H-elongata_contig67933.14405.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67933.14405.1
Unique Nameprot_H-elongata_contig67933.14405.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig67933.14405.1 vs. uniprot
Match: D8LNV0_ECTSI (Novel protein containing IQ calmodulin-binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV0_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.540e-25
Identity = 60/83 (72.29%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:    1 MAKRTREIRELTLKGLEPEIERIMDKHKAEMEEAERNHHHEAQHLREKTSQRAGEMLSEERKCLRSRVEQVRRETMGTLSEVR 83
            MAKRT+EIRELTLKGLEPEIERIMDKHKAEMEE ER HH EAQ LR++ S RA E LSEER  +R RVEQ RR+ M  + E R
Sbjct:   99 MAKRTQEIRELTLKGLEPEIERIMDKHKAEMEEIERGHHREAQRLRKQASLRADEALSEERARVRGRVEQARRQAMEAIGERR 181
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67933.14405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNV0_ECTSI1.540e-2572.29Novel protein containing IQ calmodulin-binding mot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74
NoneNo IPR availableCOILSCoilCoilcoord: 17..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67933contigH-elongata_contig67933:241..1829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67933.14405.1mRNA_H-elongata_contig67933.14405.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67933 241..1859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67933.14405.1 ID=prot_H-elongata_contig67933.14405.1|Name=mRNA_H-elongata_contig67933.14405.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MAKRTREIRELTLKGLEPEIERIMDKHKAEMEEAERNHHHEAQHLREKTS
QRAGEMLSEERKCLRSRVEQVRRETMGTLSEVRR
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