mRNA_H-elongata_contig67652.14373.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: D7G170_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G170_ECTSI) HSP 1 Score: 306 bits (783), Expect = 7.200e-102 Identity = 159/216 (73.61%), Postives = 176/216 (81.48%), Query Frame = 1
Query: 1 DWARAEDSEWKANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNV----QHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSSNGLIIPMIGEAGSLR 636
DWA ED +WKANHQL W LTDVREIGKGLTCTV+TA +PGR+AKVIAKVAR RNKGRLEDQAERQLEAEFNV HP+VVELLGAGFT EGRRF+LLEHLP GTLGTF ALS RE+MRGPS Y LK+G R L++D TL +VLQVAEAL YL AIPGAVVLHRD+RPDNIG+ARG VKMFDFGLSKA+ K + ++GEAGSLR
Sbjct: 7 DWAGVEDPDWKANHQLSWEQLTDVREIGKGLTCTVFTASIPGRKAKVIAKVARPRNKGRLEDQAERQLEAEFNVLRQVNHPHVVELLGAGFTHEGRRFLLLEHLPEGTLGTFHALSDREQMRGPSAYRTLKQGFRRLTKDLNYTLGRVLQVAEALQYLHNDAIPGAVVLHRDIRPDNIGLARGDAVKMFDFGLSKAIAKGHS-----LVGEAGSLR 217
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A6H5JM84_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM84_9PHAE) HSP 1 Score: 108 bits (269), Expect = 4.330e-25 Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 376 LKKGLRLLSRDFKLTLTKVLQVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSSNGLIIPMIGEAGSLR 636
LK+G R L++D TL +VLQVAEAL YL AIPGAVVLHRDVRPDNIG+ G VVKMFDFGLSKA+ K + ++GEAGSLR
Sbjct: 91 LKQGFRRLTKDLNYTLGRVLQVAEALQYLHNDAIPGAVVLHRDVRPDNIGLGHGDVVKMFDFGLSKAIAKGHS-----LVGEAGSLR 172
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.670e-22 Identity = 67/203 (33.00%), Postives = 103/203 (50.74%), Query Frame = 1
Query: 34 ANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNVQHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSSNGL--IIPMIGEAGSLR 636
AN ++W L ++ + G ++TA V G+ V ++ ++ E +L+ + H N+V L+GAG T +G RF++LE L GGTL +R +R +K L L L +A+AL Y A+PG +VLHRDV+PDNIG G +K+ DFGL+K + ++ + + GE GSLR
Sbjct: 42 ANLNMKWNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTSKGVRFVVLERLDGGTLTQVLGYDTR--IRDRRRRFFKRKQLSYLE-----VLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLR 237
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC) HSP 1 Score: 103 bits (258), Expect = 4.080e-22 Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 1
Query: 34 ANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNVQHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQ----VAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSS-NGLIIPMIGEAGSLR 636
A L+W L +V + G ++TA G+ V ++ + E +LE + HPN+ +L+GAGFT G RFI+LE L GGT+ +R ++ R KL+ +VLQ +AE+L Y AIP A+V+HRD++PDNIG A G +++FDFGL++ + +S + + M GE GSLR
Sbjct: 438 AQLNLQWDSLRNVEYLTDGGNAWIHTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLDHPNICKLVGAGFTPRGIRFIVLERLDGGTMSQLLGYDNR-----------IRDRRRRFWNKKKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVENASISNDVYNMSGETGSLR 632
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A7S3V705_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V705_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.470e-22 Identity = 74/213 (34.74%), Postives = 113/213 (53.05%), Query Frame = 1
Query: 34 ANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQA--ERQLEAEFNVQ----HPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVL----QVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSS--NGLIIPMIGEAGSLR 636
AN L W DL ++ + G ++TA V + VI ++ K ++D A ++E E + H N+V L GAGFT RFI++E L GGTL +R ++ R + KL+ KVL Q+AEA++Y + A+ G++VLHRD++PDNIG+ G+VK+ DFGL++ + +S + + M GE GSLR
Sbjct: 388 ANLNLTWSDLRNIEYLTDGGNNWIHTA-VMNKTPIVIKQL-----KPEVQDVAIAMNEIEGELAIHRLLNHKNIVSLFGAGFTSNKSRFIVMERLDGGTLTQVLGYDTR-----------IRDRRRRFWKKNKLSYIKVLDCAKQIAEAIDYCHRSAVEGSMVLHRDLKPDNIGLTLSGIVKIIDFGLARVVDNTSPNSNEVFEMSGETGSLR 583
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 102 bits (254), Expect = 6.490e-22 Identity = 75/227 (33.04%), Postives = 118/227 (51.98%), Query Frame = 1
Query: 46 LEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNV----QHPNVVELLGAGFTG------------------------EGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSSNGLI--IPMIGEAGSLR 636
L++ +L DV+ + G C++YTA+ GRR V+ K+ R + + A + LE E ++ QHPN+VE+LGAGF E +RF+LLE+L GGTL ++ +R +++++ + K + LQ+A AL+YL AI G+ V+HRD++P+NI + G +K+FDFGL+K + + L M GE GS R
Sbjct: 40 LDFEELRDVQYLTNGGMCSIYTAEWRGRR--VVVKMPR--DDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLT--ESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTR 260
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA) HSP 1 Score: 103 bits (256), Expect = 7.650e-22 Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 1
Query: 34 ANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNVQHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQ----VAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSS-NGLIIPMIGEAGSLR 636
A L+W L +V + G ++TA + G+ V ++ ++ E +LE + HPN+V+L+GAGFT G RF++LE L GGTL +R ++ R K++ VL+ +AEAL Y AIP A+VLHRD++PDN+G G VK+ DFGL++ + ++ + + M GE GSLR
Sbjct: 480 AQLNLQWESLRNVEYLTDGGNNWIHTAVLQGKSVVVKTLKPECQDVALAINEIEGELEIHSRLDHPNIVKLIGAGFTPRGVRFVVLERLDGGTLTQLLGYDTR-----------IRDRRRRFWAKKKISYMDVLKCARSLAEALAYCHGRAIPNAMVLHRDLKPDNVGFTLDGTVKLIDFGLARTVENATISNDVYEMSGETGSLR 674
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A7S3DX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX07_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.280e-21 Identity = 69/199 (34.67%), Postives = 101/199 (50.75%), Query Frame = 1
Query: 46 LEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNVQHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSSNGL--IIPMIGEAGSLR 636
L+W L +V + G ++TA GR V ++ ++ E +LE + HPN+V L+GAG T + RFI+LE L GGTL +R R ++ + F L +AEA+ YL + AI G++VLHRD++PDNIG G +K+ DFGL+K + +S + M GE GSLR
Sbjct: 410 LQWRQLQNVEYLTDGGNSWIHTAVFQGRPVVVKTLKPECQDVALAINEIEAELEVHSKLNHPNIVGLIGAGTTSKKVRFIILERLDGGTLTQMLGYDTRIRDRR-------RRFWKRKQFSFVDVLRIARSIAEAMTYLHESAIMGSIVLHRDLKPDNIGFTLDGTIKVLDFGLAKIIENASVTAKDVYQMSGETGSLR 601
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.430e-21 Identity = 70/207 (33.82%), Postives = 109/207 (52.66%), Query Frame = 1
Query: 34 ANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQRNKGRLEDQAERQLEAEFNVQHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQ----VAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKS--SNGLIIPMIGEAGSLR 636
A+ L+WG L +V + G ++TA + GR V ++ ++ E +L+ + HP + L+GAG T +G RFI+LE L GGTL +R ++ R R + +VL+ +A+AL+Y + AIPGA+ LHRD++PDNIG A G VK+ DFGL++ + S ++ + M G+ GSLR
Sbjct: 386 ASLNLKWGQLNNVEYLTDGGNNWIHTAVLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLDHPFICGLVGAGTTSKGVRFIVLERLDGGTLSQMLGYDNR-----------IRDRRRRFWRKKQFAYVEVLKFARCIADALDYCHRLAIPGAMCLHRDLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLR 581
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Match: A0A4D9DAK6_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAK6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 8.460e-21 Identity = 70/204 (34.31%), Postives = 110/204 (53.92%), Query Frame = 1
Query: 37 NHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKVARQ---RNKGRLEDQAERQLEAEFNVQHPNVVELLGAGFTGEGRRFILLEHLPGGTLGTFRALSSREEMRGPSPYTILKKGLRLLSRDFKLTLTKVLQVAEALNYLQKGAIPGAVVLHRDVRPDNIGMARGGVVKMFDFGLSKALGKSSNGLI-IPMIGEAGSLR 636
N ++W DL V + G T VYTA R VI K+ ++ RN+ RL + ++E ++ HPN+V+ + +G+ E R F+++E L GG+L + L G + +R + ++ L LQ+AEAL Y+ A+PG V+HRD++PDN+G G +K+ DFGL+KA+ K + M GE GS+R
Sbjct: 186 NMFVQWTDLHHVERLVDGGTSVVYTATY--NRLPVIVKILKEDCERNELRLRE-IRGEIELMQSLNHPNIVQYIASGW--EPRTFVVMERLEGGSLN--QRLGFAPTHSGVHRNNFFTRDVRK-AFSYESLLKYALQMAEALKYMHDEALPGYAVMHRDLKPDNVGFKADGTLKILDFGLAKAIPKDETARQKVRMTGETGSIR 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67652.14373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67652.14373.1 >prot_H-elongata_contig67652.14373.1 ID=prot_H-elongata_contig67652.14373.1|Name=mRNA_H-elongata_contig67652.14373.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp DWARAEDSEWKANHQLEWGDLTDVREIGKGLTCTVYTAKVPGRRAKVIAKback to top mRNA from alignment at H-elongata_contig67652:330..3143+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67652.14373.1 ID=mRNA_H-elongata_contig67652.14373.1|Name=mRNA_H-elongata_contig67652.14373.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2814bp|location=Sequence derived from alignment at H-elongata_contig67652:330..3143+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67652:330..3143+ >mRNA_H-elongata_contig67652.14373.1 ID=mRNA_H-elongata_contig67652.14373.1|Name=mRNA_H-elongata_contig67652.14373.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1272bp|location=Sequence derived from alignment at H-elongata_contig67652:330..3143+ (Himanthalia elongata Himel1 dioecious)back to top |