mRNA_H-elongata_contig67615.14370.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 120 bits (300), Expect = 1.000e-29 Identity = 65/99 (65.66%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 1 MEVSASKTAPGITVSEV----VGGKTVYNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYLRNVCDVVD 285
MEVSA K APGI V ++ G K V+N+PL WR K+ E+ LA LARRVLAIP+SQAQSER+FST GL VTPTR+RLL +N ELLVYLRNV VVD
Sbjct: 453 MEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVD 551
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.180e-22 Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 4 EVSASKTAPGITVSEVVGGKTVYNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYLRN 267
EV A K PG+ VS G+ V PL WWR K RE+ LA LARRVL IPA QAQSER+FS+ GL+VT TR R+ P+N L+V+LRN
Sbjct: 455 EVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 4.400e-20 Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 1 MEVSASKTAPGITV-SEVVGGKTVYNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYLRNVCDVVD 285
+E++A K + GI + E G VY DPL WWR + +F LA LARRVLAIPA+QA+SER+FS G IVT RN L P ELLV LR+ +V+
Sbjct: 196 VELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: UPI001D00F907 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D00F907) HSP 1 Score: 76.3 bits (186), Expect = 2.970e-14 Identity = 39/86 (45.35%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 4 EVSASKTAPGITVSEVVGGKTVYNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYL 261
E+++ K P I + +PL WW +K EF LA LARR L +PAS SER FST G I++ RN LLP+NA LL++L
Sbjct: 292 EINSFKMEPNIPCGD---------NPLHWWHSKRHEFPKLARLARRYLGVPASSTPSERAFSTAGNIISSKRNCLLPENANLLIFL 368
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: A0A6J1SJC7_FRAOC (zinc finger BED domain-containing protein 1-like n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SJC7_FRAOC) HSP 1 Score: 76.3 bits (186), Expect = 3.800e-14 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 79 PLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYL 261
PL WW+T+++ + TLA LARR LA+PA+ A SER FST G V P R+ LLP+N +LV+L
Sbjct: 567 PLTWWKTRQKRYPTLARLARRYLAVPATSASSERDFSTAGNTVRPNRSCLLPENVSILVFL 627
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 2.430e-13 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 1 MEVSASKTAPGITVSEV-VGGKTVYNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERM 183
+EV++ +T PGI++ GK VYNDPL WWRT++ EF LA LARRVLAIP+SQA SER+
Sbjct: 488 LEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: UPI0017856BD2 (zinc finger BED domain-containing protein 4-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI0017856BD2) HSP 1 Score: 68.2 bits (165), Expect = 2.470e-12 Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 76 DPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYLRNVCDVVD 285
DPL WW+ +E+ L LA + L P S SER+FS G I RNRLLPDNAE+L+++ +V+
Sbjct: 86 DPLTWWKYSRKEYPNLFTLAMKYLCAPPSSVNSERVFSASGNIYVENRNRLLPDNAEMLLFVMKNIQIVN 155
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: UPI001ED86775 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86775) HSP 1 Score: 69.3 bits (168), Expect = 2.530e-12 Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 64 TVYNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYL 261
T+ +DP WW+ ++ ++ LA++ L IPA++ SER+FS+ G ++T R RLLP+NAE LV+L
Sbjct: 143 TINDDPFQWWQDNRFKYELISPLAQKYLGIPATEVASERVFSSAGNVITSRRTRLLPENAETLVFL 208
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: T1EL08_HELRO (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Helobdella robusta TaxID=6412 RepID=T1EL08_HELRO) HSP 1 Score: 65.5 bits (158), Expect = 3.660e-12 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 76 DPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYLR 264
DP WW+ ++ T++ +A+ LA P + SER+FST G I+T R RLLPDNAE L++L+
Sbjct: 4 DPATWWKFNTAKYPTISKVAQVYLAPPPTSVPSERLFSTAGDIITEHRTRLLPDNAEKLIFLK 66
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Match: UPI000C6E0CA8 (zinc finger BED domain-containing protein 4-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E0CA8) HSP 1 Score: 70.1 bits (170), Expect = 5.450e-12 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 70 YNDPLGWWRTKEREFTTLAGLARRVLAIPASQAQSERMFSTVGLIVTPTRNRLLPDNAELLVYL 261
++DP WWR+ + F L+ LA + L+ PAS +SER+FST G I P RNRL P+N E+L++L
Sbjct: 441 HSDPFLWWRSSKELFPNLSELAMKYLSAPASSIESERIFSTGGNIYEPARNRLCPENGEILMFL 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67615.14370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67615.14370.1 >prot_H-elongata_contig67615.14370.1 ID=prot_H-elongata_contig67615.14370.1|Name=mRNA_H-elongata_contig67615.14370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp MEVSASKTAPGITVSEVVGGKTVYNDPLGWWRTKEREFTTLAGLARRVLAback to top mRNA from alignment at H-elongata_contig67615:413..697- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67615.14370.1 ID=mRNA_H-elongata_contig67615.14370.1|Name=mRNA_H-elongata_contig67615.14370.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=285bp|location=Sequence derived from alignment at H-elongata_contig67615:413..697- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67615:413..697- >mRNA_H-elongata_contig67615.14370.1 ID=mRNA_H-elongata_contig67615.14370.1|Name=mRNA_H-elongata_contig67615.14370.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at H-elongata_contig67615:413..697- (Himanthalia elongata Himel1 dioecious)back to top |