mRNA_H-elongata_contig67462.14357.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 132 bits (332), Expect = 2.740e-34 Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
FHK+LPHD +G+V+P AYQ LL+CI SNDINVC+QVPSG +G KLVNPLGGGGHQVDGADSDNIFIK PDNLLSERL
Sbjct: 94 FHKSLPHDDVGRVNPEAYQLLLDCIESNDINVCDQVPSGVESDG-RKLVNPLGGGGHQVDGADSDNIFIKQPDNLLSERL 172
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA) HSP 1 Score: 114 bits (286), Expect = 6.100e-28 Identity = 57/80 (71.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
FHKTLPHD GQVD AY++L ECI ++DINVC+ VPSGA NG KL NPLGG HQV GADSDNIFI PD+LLSERL
Sbjct: 126 FHKTLPHDKFGQVDEDAYKKLQECIFTSDINVCDDVPSGAKKNG-AKLTNPLGGTAHQVAGADSDNIFIPTPDSLLSERL 204
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 112 bits (279), Expect = 5.260e-27 Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
FHK+LPHD G V T+YQ+LL+C+ S D+NVC+QVPSGA+ G K++NPLGG HQVDGADSDN+FI PD +LSE L
Sbjct: 91 FHKSLPHDKFGTVSKTSYQKLLDCVFSADVNVCDQVPSGASARG-AKMINPLGGTAHQVDGADSDNVFITTPDGVLSEEL 169
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA) HSP 1 Score: 107 bits (268), Expect = 1.700e-25 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
+HKTLPH+ GQV+ YQ+LL+C+ ++DINVC+ VP+G G KL NPLGG HQVDGADSDN+FI PD+LLSERL
Sbjct: 133 YHKTLPHNKYGQVNKDDYQKLLDCVRTSDINVCDNVPAG----GSAKLTNPLGGTAHQVDGADSDNVFIATPDSLLSERL 208
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 1.790e-10 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
FHK+LPHD LGQVD A++ L ECI+ D ++CE VP+G G +L NPL G ++ GA + + L SE L
Sbjct: 113 FHKSLPHDSLGQVDSAAFEALTECIAQGDFDICELVPAGDVG----RLSNPLAGITVEMAGAAGSALTLPPASALDSEDL 188
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 8.530e-10 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
FHK+LPHD LGQV+ + L+ECI+ D + CE VP+G +G +L NPLGG ++ GA + + + SE L
Sbjct: 113 FHKSLPHDSLGQVNSEDFDLLMECIAQGDFDTCELVPAGDDG----RLSNPLGGIAVEMAGAAGPALTLPPASAINSEDL 188
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 62.4 bits (150), Expect = 1.600e-9 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
FHK+LPHD LGQV +++L+EC++S D + C++VP+G N LVNPLGG + + G + I L SE L
Sbjct: 106 FHKSLPHDELGQVFSFDFEELIECVASGDFDTCQEVPAG---NVEGFLVNPLGGLANDMAGPAGHALTIPAAPALDSEDL 182
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 57.4 bits (137), Expect = 9.190e-8 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSG-ANGNGGTKLVNP 153
FHK+LPHD LGQVD A+ L +CI + D+++CE VP G + G+ +LVNP
Sbjct: 54 FHKSLPHDDLGQVDADAFAALEDCILNGDLSICEDVPVGNSEGDPVGRLVNP 105
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: A0A2V9AVC1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9AVC1_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 2.950e-7 Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLSERL 240
F KTLPHD G+V+ +AYQ L+ +SS + + E + G G KL NP G + ++G D+ N+ + P L S ++
Sbjct: 84 FTKTLPHDTYGRVNLSAYQSLINALSSGNPSDFENITLG----GTVKLTNPQSGLAYDLEGMDAHNLTVLAPPTLASPQM 159
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Match: A0A2V9DH74_9BACT (Phosphoesterase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9DH74_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 1.530e-6 Identity = 30/77 (38.96%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 1 FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNPLGGGGHQVDGADSDNIFIKMPDNLLS 231
F K LPH+GLG VDP AYQ LL+ ++S + E++ G N LVNP G ++G DS + + P + S
Sbjct: 58 FCKGLPHNGLGLVDPGAYQSLLDALASGEPEDFERISMGGN----VGLVNPQSGLAFDLEGTDSHQLAMGPPPAVAS 130 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67462.14357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67462.14357.1 >prot_H-elongata_contig67462.14357.1 ID=prot_H-elongata_contig67462.14357.1|Name=mRNA_H-elongata_contig67462.14357.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp FHKTLPHDGLGQVDPTAYQQLLECISSNDINVCEQVPSGANGNGGTKLVNback to top mRNA from alignment at H-elongata_contig67462:2026..2924+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67462.14357.1 ID=mRNA_H-elongata_contig67462.14357.1|Name=mRNA_H-elongata_contig67462.14357.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=899bp|location=Sequence derived from alignment at H-elongata_contig67462:2026..2924+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67462:2026..2924+ >mRNA_H-elongata_contig67462.14357.1 ID=mRNA_H-elongata_contig67462.14357.1|Name=mRNA_H-elongata_contig67462.14357.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig67462:2026..2924+ (Himanthalia elongata Himel1 dioecious)back to top |