mRNA_H-elongata_contig6711.14320.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6711.14320.1
Unique NamemRNA_H-elongata_contig6711.14320.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A6H5JPD9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD9_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 2.510e-129
Identity = 223/360 (61.94%), Postives = 276/360 (76.67%), Query Frame = 1
Query:    1 EQQRVDSSTPLIRSIWGGVRNNSGSMNDSSSDLPDNGPINDDLGRLDELGVSEGMIRAGSLEAEI-PAARR--------NVR---LNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDEGEEKITEPVPM-VGESL 1041
            E QR   STPLI      + N    MN +S +  + G  N   GR+   G+ E + +AGS EAE  PA RR        NVR   +++ DDGVRG++ASR+ LLLLT+VN+PL+ AGV++L L+W D  VC   H  KW+WWALLSV+R+ L+TPV++VRW++EGQRE+ RNQA+D LSSN+RNSLDIVGLVWFVIGH+WLLQN+ C+NP +SPIYQLCLVYII+ YI ICLPCILLMLLVP XXXXXXXXIR++GMLQGPQR+KGAR++EIEKLP  KY E++DME ++CAIC+VDY  EDELR LPC HAFHK+CVDSWL +NASCPNCR RCF+  E+ EGEEKI +  P  VG++L
Sbjct:   85 EHQRE--STPLIS-----LTNRQAIMNVASINESNEG--NSGSGRI---GLGELIQQAGSDEAETQPATRRPVNRATNRNVRHVWMHIADDGVRGLSASRLSLLLLTLVNLPLIAAGVVILILHWQDTDVCDVDHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQGCDNPRDSPIYQLCLVYIIITYIHICLPCILLMLLVPVXXXXXXXXIRLMGMLQGPQRLKGARQDEIEKLPVVKYREVQDMEDDACAICIVDYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFE--EDGEGEEKIADDAPAPVGDNL 430          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S2V5V5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5V5_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.320e-67
Identity = 127/265 (47.92%), Postives = 178/265 (67.17%), Query Frame = 1
Query:  208 RNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQR-EDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLL-QNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGE-MEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDE 993
            R VR+NV+   +R +N  ++ +L+  +VN+P +VA + VL+L+WGD   C      +WRWWAL+S +R+A+ T V++V +     R  D R  A   L SNLRN +D +GL+WFV+G++WL  Q+E C+NP  SPIYQLC+  +++ YI ICLPC++      XXXXXXXXX RVL  LQ P R KGA +  I++L   K+   + ++E E+C ICL D+ + D LR+LPC+H FH+SCVD WLL+NASCPNCR    +  EEDE
Sbjct:   79 RRVRMNVLGTSMREVNNRKLVVLVTLLVNIPQIVAAIAVLSLHWGDTFACDPERRQRWRWWALISTVRMAIYTVVMVVLYFFTLHRPRDSREVA---LLSNLRNGVDALGLIWFVVGNMWLFGQSESCDNPGSSPIYQLCVAMLLITYIHICLPCLIXXXXXXXXXXXXXXXXRVLSRLQDPMRGKGANQAAIDRLEAIKFQPGVTEVEEETCPICLTDFVEGDGLRLLPCDHCFHQSCVDEWLLLNASCPNCRSTILEEGEEDE 340          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S3XQH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH4_HETAK)

HSP 1 Score: 225 bits (573), Expect = 1.450e-63
Identity = 117/266 (43.98%), Postives = 175/266 (65.79%), Query Frame = 1
Query:  208 RNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLL-QNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYG-EMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDEGE 999
            + VR+NV+ +G+R +N  R+ + L  +VN+P +VA  +VL+L+W DD VC   H  +W+WWA ++  RLA+ T +++  + +  +R     + +  + SN RN +D +GL+WFV+G++WL  Q E C+    SP+YQLC+  ++V Y+ ICLPC++      XXXXXXXXX RVL  LQ P R KGA +  I+KL   KY  ++ ++E  +C ICL +Y   +ELR LPC+H+FHK CVD WLL+NA+CPNCR    D  +E+E +
Sbjct:   12 QRVRMNVLQNGIREVNNRRLVVFLTLVVNLPQLVAAAVVLSLHWDDDAVCDADHRERWKWWAAVAAARLAVYTGLLVALYLVLLRRPRDAREVI--VLSNARNGVDALGLIWFVVGNMWLFGQTESCDGAGASPVYQLCVAMLLVTYLHICLPCLIXXXXXXXXXXXXXXXXRVLARLQDPMRGKGANQAAIDKLKIIKYRPDLPEIEEPTCPICLNEYENGEELRSLPCKHSFHKKCVDEWLLVNATCPNCRTTILDEEQEEEAK 275          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S2DZB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZB6_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.380e-60
Identity = 115/285 (40.35%), Postives = 180/285 (63.16%), Query Frame = 1
Query:  208 RNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLAL--LTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQNEH------CENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDMEGE-----SCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPV---EEDEGEEKITE 1014
            +NVR+NV++D +R +++SR+ +  L + N P +VA ++VL+L+W DD+VC   H +KWR WAL++ IR+ L  +T  +I+       ++D++ + +  +  NLRN LD  GLVWF++G++WL           C  P++SPIY LCL  ++  YI ICLPCI+ +L++P    XXXXXI +L  ++ P+  KGA +  I+KLP  K+ ++ D+E       SC ICL+D+  +DE+RILPC+H FH  C+  WL MN++CP+CR+     V   +E    E + E
Sbjct:   60 QNVRVNVLNDSLREVSSSRIAVSALILFNFPQIVAAIVVLSLHWPDDSVCDAEHRLKWRVWALIATIRMVLHMVTIFLIIGVSRMVTQQDRQTRLL-MILHNLRNLLDAAGLVWFLVGNMWLFGGSDEKVTTVCVRPTQSPIYNLCLAMVVFNYIHICLPCIVAILMIPVLCFXXXXXIHMLRWMRDPEEGKGASEAAIKKLPLVKFRDLSDVESTMSSQLSCPICLMDFGPDDEVRILPCKHYFHDQCIGEWLGMNSTCPSCRKNILKDVPSADEKSSNETVEE 343          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: D7FY42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY42_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 7.370e-54
Identity = 84/120 (70.00%), Postives = 107/120 (89.17%), Query Frame = 1
Query:  220 LNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQNE 579
            +++ DDGVRGMNASR+GLLLLT+VN+PL+ AGV++LTL+W D  VC   H  KW+WWALLSV+R+ L+TPV++VRW++EGQRE+ RNQA+D LSSN+RNSLDIVGLVWFVIGH+WLLQN+
Sbjct:    1 MHIADDGVRGMNASRLGLLLLTLVNLPLIAAGVVILTLHWQDTDVCDVEHRRKWKWWALLSVVRMMLITPVVMVRWRVEGQREEDRNQAIDHLSSNMRNSLDIVGLVWFVIGHMWLLQNQ 120          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A7S1U290_9STRA (Hypothetical protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U290_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.990e-49
Identity = 102/284 (35.92%), Postives = 163/284 (57.39%), Query Frame = 1
Query:  172 AGSLEAEIPAARRNVRLNVMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAV-------------DQLSSNLRNSLDIVGLVWFVIGHLWLLQNEHCE-NPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQ---RMKGARKEEIEKLPTAKYG--EMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRR 966
            AG++ A    A R +RLN  ++G R + +SR  LL+   V VP + AG+ VL  NW D   C   H +KWRWWAL+SV+R+A    V+ +   L  +      + V             D+L+   ++ +D++GLVWF+IG+LW+L ++       +S ++ LC+ +I+V YIQICLPC + +  +P         +R +  +Q  +     +GA ++ I+++P  K+   ++   +  +CAICL +YA ED+LR+L C HAFHK C+D WL +N SCP+CR +
Sbjct:   15 AGAVGARQQRAARRLRLNAAEEGWRRILSSRTLLLITMGVYVPQIAAGIGVLATNWNDPNACDLEHLLKWRWWALVSVVRMAAFLLVMTMDHVLVDEERSPLREFVLRTGGEEQLILWHDKLARG-KHLVDVLGLVWFIIGNLWVLSDDDSSPGQGKSALFILCVFFIVVYYIQICLPCAVAVAAIPVLCFCLPCLLRFMVRMQDAEAHAERRGAEEDVIDRIPIRKFASSQLSSDDDATCAICLCEYADEDQLRVLHCGHAFHKDCLDPWLRLNGSCPSCRAK 297          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A835Z0W6_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W6_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.000e-49
Identity = 104/256 (40.62%), Postives = 145/256 (56.64%), Query Frame = 1
Query:  271 LLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLL--QNEHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDMEGE------------------------SCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCR 960
            ++L  +VN+P ++ G  VL  +W DD  C   H  +WR W++L +  +A  T +    W+    R D     V    +  +N+L+ +GL+WFV G+LWL   Q+E C++ S S IYQLCLV I+V+Y+QICLPC+L +L+VP   XXXXXX RVL     P   +GA +  I+ LP  KYG+                               +C ICL DYA  DELR LPC HA H++C+DSWL ++A+CPNCR
Sbjct:    1 MILTAIVNIPQIIGGAFVLAAHWRDDAACDAEHRARWRVWSVLELAIIAGHTAIRAATWRAGEARAD-----VSHALATAKNALEALGLIWFVAGNLWLFGGQDEGCQDASSSAIYQLCLVLIVVLYVQICLPCLLAVLMVPVLCXXXXXXXRVLSYFHDPMAGRGASQCAIDALPIVKYGDTSAXXXXXXXXXXXXXXXXXGALPTGAALETACPICLNDYAVGDELRQLPCAHALHRACLDSWLAISATCPNCR 251          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A8K1CPU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPU5_PYTOL)

HSP 1 Score: 181 bits (460), Expect = 2.230e-47
Identity = 109/297 (36.70%), Postives = 161/297 (54.21%), Query Frame = 1
Query:  109 GPINDDLGRLDELGVSEGMIRAGSLEAEIPAARRNVRLNVMDDGV---RGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQRED---QRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQN-EHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYGE-MEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFD 975
            GP+   +   D     E   R  + +  +      VRLNV++  V   R    SR+ + +LT+VNVP ++A  ++L L W + T+C          W LL  I L+L   +  V + L G R +   Q  +      SN++  LD+ GL WF++G++W++ +   C++ S    YQL +  I++ Y +I LPCILL+ L+P         IR+L  LQ P R KGA KE I +L T K+   M   E  SC ICL DY  + ELR+LPCEH FHK CVD WL++N++CP CR+  ++
Sbjct:   13 GPMASTMRPADRTRSPESSQRLLARDPTLNEEAHAVRLNVLNSSVQEARDARNSRLIMWVLTVVNVPQILAAAVILALKWTESTLCYRIQI-----WVLLHTIHLSLTLALEWVMYYLNGGRTNRVLQMRERYMSYLSNVKYGLDLAGLFWFLVGNMWVISDGARCDDGSTM--YQLAMWMIVISYAKIFLPCILLLALLPVICFCLPCVIRILSRLQDPMRGKGATKEAINRLSTRKFAAAMFPPEDSSCCICLNDYEPQQELRVLPCEHHFHKECVDEWLIVNSTCPTCRKSIYE 302          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A4D9DBP5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBP5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 6.300e-44
Identity = 94/262 (35.88%), Postives = 147/262 (56.11%), Query Frame = 1
Query:  286 MVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLDIVGLVWFVIGHLWLLQN--EHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLP-------------TAKYGEME----------------------DMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCR 960
            +VN+P ++A V++L+  W  DT C+ S   KW+ +AL++ +R+ L    +   ++L G+        + +  S+ RN LD  GL+WFV+G++WL     E C +P+ SP+Y LC+ ++ + Y Q+CLPC+++++++P    XXXX IR+L  +Q P R KGA    I KLP             TA  G +E                      +    SCA+C+ +YA ++++R+LPC H FH SCVD WL +NASCP CR
Sbjct:   75 VVNIPQIIAAVVILSKYW-HDTTCEPSETTKWKTYALIAALRMFLYVSSVSALYRLNGRMP--ATTRLMRFLSHARNGLDAFGLIWFVVGNMWLFGGDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPVLCFXXXXLIRILARIQDPMRGKGATPSMINKLPMMKSRQIQAEKAATASAGSLEGQAAPPASQGGEQDTQVSVTGVESNSTSCAVCISEYAPDEDVRLLPCAHYFHASCVDEWLKVNASCPTCR 333          
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Match: A0A662XM18_9STRA (RING-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM18_9STRA)

HSP 1 Score: 172 bits (437), Expect = 8.130e-44
Identity = 104/286 (36.36%), Postives = 152/286 (53.15%), Query Frame = 1
Query:  196 PAARRNVRLNVMDDGV---RGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGVKWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLS---SNLRNSLDIVGLVWFVIGHLWLLQN-EHCENPSESPIYQLCLVYIIVMYIQICLPCILLMLLVPXXXXXXXXXIRVLGMLQGPQRMKGARKEEIEKLPTAKYG-EMEDMEGESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFDPVEEDEGEEKITEPVPMV 1029
            P     VRLNV++  V   R    SR+ +  +++VNVP +VA  +VL LNW  +T+C          W LL    LA+   +  + + L G R +   +  +Q     S L+  LD+ GL WF++G++W++ +   C++ S    YQL L  I++ Y +I LPC+LL+ L+P         IR+L  LQ P R KGA KE I++L +  +   M   E   C ICL DY     LR+LPC+H FHK CVD WLL+N++CP CR+  FD   +       T    M+
Sbjct:   76 PDEAHAVRLNVLNSSVQEARDARNSRLIMGAISLVNVPQIVAACVVLALNWKSETLCYRIQV-----WVLLHTAHLAITLALEWMLFYLNGARSNSALRLREQYMAPLSQLKYGLDLAGLFWFLVGNMWVISDGARCDDGSAM--YQLALWMIVISYAKIFLPCLLLLALLPVLCFCLPCVIRLLSRLQDPMRGKGANKEAIDRLESKTFTTNMFPPEDACCCICLNDYEPAQALRVLPCDHHFHKDCVDEWLLVNSTCPTCRKSIFDTASDGSSNAPATSEEDML 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6711.14320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPD9_9PHAE2.510e-12961.94RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2V5V5_9STRA2.320e-6747.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQH4_HETAK1.450e-6343.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DZB6_9STRA7.380e-6040.35Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D7FY42_ECTSI7.370e-5470.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U290_9STRA3.990e-4935.92Hypothetical protein n=5 Tax=Phaeomonas parva TaxI... [more]
A0A835Z0W6_9STRA8.000e-4940.63RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8K1CPU5_PYTOL2.230e-4736.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9DBP5_9STRA6.300e-4435.88RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A662XM18_9STRA8.130e-4436.36RING-type domain-containing protein n=2 Tax=Nothop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6711contigH-elongata_contig6711:1169..6167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score180.3
Seed ortholog evalue1.5e-42
Seed eggNOG ortholog44056.XP_009034871.1
KEGG koko:K13148,ko:K19041
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010498,GO:0016020,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0022414,GO:0030163,GO:0031090,GO:0032182,GO:0032183,GO:0032184,GO:0032446,GO:0032501,GO:0032502,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051603,GO:0061458,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-27_007010.1
Exons6
Model size2642
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6711.14320.1prot_H-elongata_contig6711.14320.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6711 2764..6092 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.8245847-UTR-H-elongata_contig6711:1168..27631622931061.8245847-UTR-H-elongata_contig6711:1168..2763Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6711 1169..2763 -
1691679682.0497293-UTR-H-elongata_contig6711:1168..27631691679682.0497293-UTR-H-elongata_contig6711:1168..2763Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6711 1169..2763 -
1622931061.940788-UTR-H-elongata_contig6711:6092..61671622931061.940788-UTR-H-elongata_contig6711:6092..6167Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6711 6093..6167 -
1691679682.131756-UTR-H-elongata_contig6711:6092..61671691679682.131756-UTR-H-elongata_contig6711:6092..6167Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6711 6093..6167 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931061.8441126-CDS-H-elongata_contig6711:2763..28981622931061.8441126-CDS-H-elongata_contig6711:2763..2898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 2764..2898 -
1691679682.0666203-CDS-H-elongata_contig6711:2763..28981691679682.0666203-CDS-H-elongata_contig6711:2763..2898Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 2764..2898 -
1622931061.8685288-CDS-H-elongata_contig6711:3506..36221622931061.8685288-CDS-H-elongata_contig6711:3506..3622Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 3507..3622 -
1691679682.078015-CDS-H-elongata_contig6711:3506..36221691679682.078015-CDS-H-elongata_contig6711:3506..3622Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 3507..3622 -
1622931061.883896-CDS-H-elongata_contig6711:4120..43011622931061.883896-CDS-H-elongata_contig6711:4120..4301Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 4121..4301 -
1691679682.0905223-CDS-H-elongata_contig6711:4120..43011691679682.0905223-CDS-H-elongata_contig6711:4120..4301Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 4121..4301 -
1622931061.8991807-CDS-H-elongata_contig6711:4773..48071622931061.8991807-CDS-H-elongata_contig6711:4773..4807Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 4774..4807 -
1691679682.100367-CDS-H-elongata_contig6711:4773..48071691679682.100367-CDS-H-elongata_contig6711:4773..4807Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 4774..4807 -
1622931061.9124153-CDS-H-elongata_contig6711:5101..52441622931061.9124153-CDS-H-elongata_contig6711:5101..5244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 5102..5244 -
1691679682.1094947-CDS-H-elongata_contig6711:5101..52441691679682.1094947-CDS-H-elongata_contig6711:5101..5244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 5102..5244 -
1622931061.92373-CDS-H-elongata_contig6711:5729..60921622931061.92373-CDS-H-elongata_contig6711:5729..6092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 5730..6092 -
1691679682.1198874-CDS-H-elongata_contig6711:5729..60921691679682.1198874-CDS-H-elongata_contig6711:5729..6092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6711 5730..6092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6711.14320.1

>prot_H-elongata_contig6711.14320.1 ID=prot_H-elongata_contig6711.14320.1|Name=mRNA_H-elongata_contig6711.14320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MNDSSSDLPDNGPINDDLGRLDELGVSEGMIRAGSLEAEIPAARRNVRLN
VMDDGVRGMNASRMGLLLLTMVNVPLVVAGVIVLTLNWGDDTVCKESHGV
KWRWWALLSVIRLALLTPVIIVRWKLEGQREDQRNQAVDQLSSNLRNSLD
IVGLVWFVIGHLWLLQNEHCENPSESPIYQLCLVYIIVMYIQICLPCILL
MLLVPVICFCLPCVIRVLGMLQGPQRMKGARKEEIEKLPTAKYGEMEDME
GESCAICLVDYAQEDELRILPCEHAFHKSCVDSWLLMNASCPNCRRRCFD
PVEEDEGEEKITEPVPMVGESLV*
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mRNA from alignment at H-elongata_contig6711:1169..6167-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6711.14320.1 ID=mRNA_H-elongata_contig6711.14320.1|Name=mRNA_H-elongata_contig6711.14320.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4999bp|location=Sequence derived from alignment at H-elongata_contig6711:1169..6167- (Himanthalia elongata Himel1 dioecious)
GAGCAGCAACGCGTGGATTCGTCGACGCCTCTTATCCGCTCCATCTGGGG TGGAGTCCGAAACAACTCGGGCTCAATGAACGATAGCAGCAGCGATCTCC CGGACAATGGGCCGATAAACGATGACCTGGGGCGACTCGACGAGCTTGGG GTCAGCGAAGGGATGATTCGAGCGGGGAGCTTGGAAGCGGAGATCCCAGC GGCGCGGAGGAATGTTCGTCTGAACGTGATGGATGACGGGGTTAGGGGCA TGAACGCCAGCCGGATGGGGCTGCTCTTGCTCACGATGGTGAATGTGCCG CTCGTGGTGGCGGGTGTTATCGTGCTCACGCTCAACTGGGGGGACGACAC CGTCTGCAAGGAGTCGCATGGAGTTAAGTGGCGCTGGTGGGCGTTGTTGT CCGTGATTCGGCTGGCACTGCTTACTCCGGTTATTATTGTGAGTACTCAT AGTCACGGTAGCTCTATGGTCTAGGTGTACATGTCGATTAATAGCTAGCT CCAGGAGGAGACTTATTGAACATGCAAGTACCTTAACGTTCTATGATAGG TGACTAGGGTACCGCGGGTCACATTCAATGGGGAGGTCAACATCTTGGGA TGCTTTGAACCAGATGCGTCTGTGATAATGGCTAGTGTGCTGGATCGTTT GTTCTCTGTAGACATAATTTTGCGGTAAGGTGAAATGATTTGATTAAGGA AACGGCCCGGGTGGGGCAGAAGAAGCGAAACTTTCTCTTTGCGATCGATT TTTGAACTTTTCTCGACTGCGGAGCAGAGTCAGCACTGTAATTAGTTGTG TTCGTGATGTGGGATTGGTAACAAACGGTTTGCCGCTCGCTATGGATGTC CGCTTGGTTTGTTTTTGATGTTGATAAAAACCCCTTTGCTTTTGATGTTC ATGTTTCCGCTGTGCTGCCTCAGGTGAGATGGAAACTCGAAGGGCAGAGG GAGGACCAGCGCAACCAGGCCGTGGACCAGCTATCGAGCAACCTTCGGAA TTCCCTCGACATCGTCGGTTTGGTGTGGTTCGTTATCGGCCATCTGTGGC TCCTACAGAACGAACAGTGAGAGTCAGTGAGAGAGTGTCTGGGTAGTTTT CCTTCCCTTCTCTCGGCTGTGGTAGTCGAGACCACACTTTGTCAATTCAT CGCGTTATTGCAGCATTGTCTGACCAATCGATGCCTTGAAGCAGTATCGC GATTGACGGCGATATGCTTGCCGTACGATTGACGTCGCTTCCCGCTCGCC TCTGAATGTCGTGTATCGCACTGGTGAACGGAACGGGGCGACCAAACCTT TGTCGCCGATGCCCTCCCCTTTCACGCATGTCTCTTTCTGTGTCTTTCTC GTGGCGATAGCTGCGAAAACCCATCGGAATCGCCCATATACCAGGTGAAC TGACGTCACTCAAAGCACATGTTGTACGTAGGACTCGTGTCTCTTTCCTG TGGAGGCGGTTATTGGTCTCCTCGACCTGACTTGTTGTATTAATTTGCCT TTCGTAGCTGGCCGTTAGAAGTACCAACAACAGAGTTTTTGAAGCGAACG CTCCGCCGGGTACAGACTTGAGACTTGCCTACCCACCCTACTTAAGATCG CGGCGGAAATCTCTACAACTACAACGCCACACTACTTGATGCCGTGGTTC GCGTCTGTGTGGAGGAAAGTAGGAAGATTTCTCAAGTCTATCCCCCCAGG GGGCATTATCTTCGAACCTTACGGTACAAAGCCGGCCATAGTAAACTCTG CCCTTGATCATTTTTATTATGACATGTTTTCCGCCTCGTGTGCGACCTTC CCAAGTAACTTCTAACTTCCGCCCGCCTGTACTTTTTTTGCTCTTGCCCT TGCCCTCTCCGATCAGCTGTGCCTGGTGTATATTATCGTCATGTACATCC AAATCTGCCTACCGTGCATCCTGCTGATGCTGCTAGTGCCGGTAATCTGT TTCTGCCTACCGTGCGTGATCCGGGTCCTGGGCATGCTGCAGGGCCCGCA GCGCATGAAGGGGGCCAGAAAAGAGGAGATTGAGAAACTACCCACAGGTG CCTTTACGGTATCTCTGCCCTCCCGATATTGACATGTCTTCACTGCACAG TGTCTTGAGTGTGGTGGTGCAGTGTACAGTGTCTTGACGATGGTCGTCCT CTTATTGCAAGGCGCCTTCCCACCCCAAAAAATAATGAGAATCCATTGCG TTTGATCTCTGTACCACAGTGCCTCGCCAAAGAGCAGCAGCAGCAATCGC GATACCTGAAAAGACGAAAGTTTCTGCTCTTGAGCTGTACATGGTGCCTT TGGTGGCCCTTGTCTTGTGGATGTCTCGACGTGTGTGTGTGTGTGTGTGT GTGTGTGTGCGTAACAAGCTTCATGTGGGGTTTGCGTGTTACGCTTCATA AACATGAAAATATCATACCCCATCGCACGACACCACCCTTTTCATTTTCA TTTTCTTTCGCTGCCGGGTATGCAACCCGATCCGCGGATAAATGAATAAT TTGATCCGCGTGATAAACGGAATCCGACTCGCCTCGGGAGAGCAGCGAAA TACGGTGAGATGGAGGACATGGAGGGCGAATCATGCGCTATCTGCCTGGT GGACTATGCGCAAGAGGATGAGCTGCGGATACTTCCTTGCGAGCACGCCT TCCACAAATCGGTGCATGAAGCCTCCGCTCCGATCCGCTGAGACAGGGAA AGGGGGGAGAGGGTGGACACTCAATCTCCTTGTCCATATCCATATCACCA TCCATTGATTTAGGTTTATTACCGACAGAGAAGGACATGATTTCGTATGG TATGGTAATTGATGAGGTATCCTCAGCGTGGAATGTCGTGTTCTCAACCG CGGCCTTGTAGTGCCCAATCTCAACCGCGGCCAGTGGTGGCCTGGAGTGA TTTTTTTTTTCGAAATTGTGCGCGCTGTTCGCAGAGTCCATCACTGCGTT GTGAGAACTCTTTGCTCTGTTCCACCAGAGAGTCAGCCCTAGTTCACTAT TGTTACGATTGACACAATTTATACCATACTGTATATACATCTATATCAGT TATAATCGGCACCCCACAGGAAGGGGAAAGCGTTTATCGAAACAGGTTGT CCCATTTGTTGATACAATCACTCTTGAGCAACCCCTAGTATACACTCGAA GCTGACCATGGTGCTAAGAAGAGTGTGGATGTTAGGAGGGTTGGAATGAG TTGATATATTTTTTAAAGAAAAATATGTGCGCGCGTTCCCCCGCGCTGAA ATGTTGCTTTGTTCATCAGTGCGTCGACAGCTGGTTATTGATGAACGCGA GCTGTCCCAACTGCCGAAGGCGTTGCTTTGATCCAGTGGAGGAGGACGAA GGAGAGGAGAAGATTACGGAGCCCGTGCCCATGGTCGGCGAAAGCCTCGT TTGAAGACTCGATCTAGATCGCGAACAGCTCCACCGCCTGGGAAGGCTGA CCGGCCTGGCCTGGGTGCCTTTGGCGACTGAAAAATTAGAAGCCCCTCAC TCCCTAGTCTACCGCCAAGGCCCTCCTTTTCTCCATGTGGAACGACTTGA GGCGACGGCATATAAGGGGGGCTTTGCTGGTGCGATAGATGTGGGCAAGT GTACAGCTAGGTTAGAACAACGAACGCAAAAATAAAGGATTGCTCACGAT GCTCCTGGATTATGCTGGGGTGGAACGAGGAGCCTCACGGTTGGTGGAAG GTGTTTCGCATTGCCTGAGCGCCCTTGCCTGCCCGACATGACACGGAAGT GAACGTGGCTCATGAGCGATGCTTGACTTGGGTATGGAGTTCAGGTAAAA TCGGGTCGTGCTTACTCGGTGAGATGCTTAGGCAACATTTTTCTGCCCCG TCTCGTCCTTTAGGCAGAGCCAGTAAGTTTGGGCTGGGTCTTGTTTACTG GCTTGGGGCTTGGGTTCGGTCGAGTTGGGGAGAACGCGACCGAGATACGA CATCCGATCGTCGTCGAGAACGCAAGGGCTTCGCCGCTGCCTTCGTTGTC TCTAGTCTCTAGTGCATTTTGTGCACTCTCCTTTTTGCCCCTCCGCCTCC GCCTCCCTCCGTGCCTAGTCCACACGGAATCAAATATATTGGAGTTAGTA GATCGTGTGAAACTCAAGCTAATGCTTTCCGTAGGCGATTTGATGCGTGC CGTTTCCCCCCTTGCCTACCCGGCTACTTGGTGTGTTCGCAGCTGCGTTT CATCTATACAACACTGCTGGTATATTATATTTATGTACCACCACGTCGTC TTTTGGGTGGGTTTATGTTATTTTTTTTGGAGTGTGCCATGACTGCATCG CTTTGTATGCTTCACATTTTGCCCTCAAGTGCATTCGATTTGATTCGTCT CGTCTCGTCTCGTCTTGCTGCACCTGTGTACATATTTGGGGCGGTTCAGC ACATACAAGCAGACGATGCATAACAAGAGGTTAGAGCTGTTGTTGAGTAT ACCTGCTCGGCCTATCTGTTCGGATGTATTTGCGGAATAGACAAAGTAGA CGTCTAACGTTTTTCTTTTTCTAAGCGGGACTCTTGTTATAGACCGAACC TCCGTACCTCCCGTCCATACACAATGTCGTGTAGTAATTGTAGGCCGATA CCCAGCACGAGGAGACCGGCAATTCTGAAGGTGGCATCTACCTGGGTGCT TGCAACCCAAAGTTAATGCCGAAAGCTCCAGCGGTCTAACTAGTCGGCAT TTTCCTCGCACACAGACAACTGACAGTAGACTCTATGTACTGCAGTATTT TTATAGATTCCTCCCCTATTAATAATATTTTTGTGTGCCGTGATTTCATC ATCGCCGTATCGCAGCTTCTTTCGTGTTTCTGATTACCAAAATACAGAAG AACCGGCAGAAATCCAATTTCTACGAGTTTTTACTTAATAAGTGCTTGTA ATTCAAAGTGAAAATAAAATGATACCGGCATGCATTAGCGTTATGTGCCA AGCTAGCTCTACATACTAATGATAAAAGTATACACTACAGTAGAGCTCC
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Coding sequence (CDS) from alignment at H-elongata_contig6711:1169..6167-

>mRNA_H-elongata_contig6711.14320.1 ID=mRNA_H-elongata_contig6711.14320.1|Name=mRNA_H-elongata_contig6711.14320.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig6711:1169..6167- (Himanthalia elongata Himel1 dioecious)
ATGAACGATAGCAGCAGCGATCTCCCGGACAATGGGCCGATAAACGATGA
CCTGGGGCGACTCGACGAGCTTGGGGTCAGCGAAGGGATGATTCGAGCGG
GGAGCTTGGAAGCGGAGATCCCAGCGGCGCGGAGGAATGTTCGTCTGAAC
GTGATGGATGACGGGGTTAGGGGCATGAACGCCAGCCGGATGGGGCTGCT
CTTGCTCACGATGGTGAATGTGCCGCTCGTGGTGGCGGGTGTTATCGTGC
TCACGCTCAACTGGGGGGACGACACCGTCTGCAAGGAGTCGCATGGAGTT
AAGTGGCGCTGGTGGGCGTTGTTGTCCGTGATTCGGCTGGCACTGCTTAC
TCCGGTTATTATTATGAACGATAGCAGCAGCGATCTCCCGGACAATGGGC
CGATAAACGATGACCTGGGGCGACTCGACGAGCTTGGGGTCAGCGAAGGG
ATGATTCGAGCGGGGAGCTTGGAAGCGGAGATCCCAGCGGCGCGGAGGAA
TGTTCGTCTGAACGTGATGGATGACGGGGTTAGGGGCATGAACGCCAGCC
GGATGGGGCTGCTCTTGCTCACGATGGTGAATGTGCCGCTCGTGGTGGCG
GGTGTTATCGTGCTCACGCTCAACTGGGGGGACGACACCGTCTGCAAGGA
GTCGCATGGAGTTAAGTGGCGCTGGTGGGCGTTGTTGTCCGTGATTCGGC
TGGCACTGCTTACTCCGGTTATTATTGTGAGATGGAAACTCGAAGGGCAG
AGGGAGGACCAGCGCAACCAGGCCGTGGACCAGCTATCGAGCAACCTTCG
GAATTCCCTCGACATCGTCGGTTTGGTGTGGTTCGTTATCGGCCATCTGT
GGCTCCTACAGAACGAACAGTGAGATGGAAACTCGAAGGGCAGAGGGAGG
ACCAGCGCAACCAGGCCGTGGACCAGCTATCGAGCAACCTTCGGAATTCC
CTCGACATCGTCGGTTTGGTGTGGTTCGTTATCGGCCATCTGTGGCTCCT
ACAGAACGAACACTGCGAAAACCCATCGGAATCGCCCATATACCAGCTGC
GAAAACCCATCGGAATCGCCCATATACCAGCTGTGCCTGGTGTATATTAT
CGTCATGTACATCCAAATCTGCCTACCGTGCATCCTGCTGATGCTGCTAG
TGCCGGTAATCTGTTTCTGCCTACCGTGCGTGATCCGGGTCCTGGGCATG
CTGCAGGGCCCGCAGCGCATGAAGGGGGCCAGAAAAGAGGAGATTGAGAA
ACTACCCACAGCTGTGCCTGGTGTATATTATCGTCATGTACATCCAAATC
TGCCTACCGTGCATCCTGCTGATGCTGCTAGTGCCGGTAATCTGTTTCTG
CCTACCGTGCGTGATCCGGGTCCTGGGCATGCTGCAGGGCCCGCAGCGCA
TGAAGGGGGCCAGAAAAGAGGAGATTGAGAAACTACCCACAGCGAAATAC
GGTGAGATGGAGGACATGGAGGGCGAATCATGCGCTATCTGCCTGGTGGA
CTATGCGCAAGAGGATGAGCTGCGGATACTTCCTTGCGAGCACGCCTTCC
ACAAATCGCGAAATACGGTGAGATGGAGGACATGGAGGGCGAATCATGCG
CTATCTGCCTGGTGGACTATGCGCAAGAGGATGAGCTGCGGATACTTCCT
TGCGAGCACGCCTTCCACAAATCGTGCGTCGACAGCTGGTTATTGATGAA
CGCGAGCTGTCCCAACTGCCGAAGGCGTTGCTTTGATCCAGTGGAGGAGG
ACGAAGGAGAGGAGAAGATTACGGAGCCCGTGCCCATGGTCGGCGAAAGC
CTCGTTTGATGCGTCGACAGCTGGTTATTGATGAACGCGAGCTGTCCCAA
CTGCCGAAGGCGTTGCTTTGATCCAGTGGAGGAGGACGAAGGAGAGGAGA
AGATTACGGAGCCCGTGCCCATGGTCGGCGAAAGCCTCGTTTGA
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