mRNA_H-elongata_contig66984.14299.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig66984.14299.1
Unique NamemRNA_H-elongata_contig66984.14299.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S3ZT12_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.270e-70
Identity = 118/247 (47.77%), Postives = 158/247 (63.97%), Query Frame = 1
Query:   79 DLEDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTP 819
            D  ++F V V GERIV++DV R NE+GWTPLHACCH++ T    L+IL+E+V     L  KT +GPG++ SG+T LHMA+AYGV  +VEALL+AGAD N KN   W+PLLE CHRGF GI + L+     L HIP+ +AS      +  PQS                    GS KD  N LGWTPLHEA ++N +D  + LLV+GA+ T K+ +GA+PF++AS   +R++LKE+GG +A  +   P
Sbjct:   70 DYSERFHVTVSGERIVVDDVERANEDGWTPLHACCHNHQTMGAALDILKELVKRKASLERKTVRGPGAYASGWTVLHMAAAYGVEPLVEALLEAGADVNTKNDQGWTPLLEACHRGFDGIVRKLLTGNKTLDHIPDVEASKAFPLAKPPPQSALGEASRCGFEDIVKVLLEAGSDKDLVNHLGWTPLHEAAFYNHVDVARTLLVYGANATKKDARGAVPFHVASLPSVRDVLKELGGPDACPERDCP 316          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: D8LGQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ3_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.870e-60
Identity = 99/135 (73.33%), Postives = 116/135 (85.93%), Query Frame = 1
Query:   13 SASTTSSGSDSSSIVPPPLIGPDLEDKFTVMVDGERIVLEDVTRQ-NEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEV 414
            S S TSSGS+     PPPL+ P+LEDKFTV+VDGE +VL+DVT+Q NE+GWTPLHACCHS TTA IGL ILEEVVA+GGDLNL+TK+GPG+FNSGFT LHMA AYGV ++VEAL+KAGADPNC+N FDW PLL +
Sbjct:   69 SFSRTSSGSEG----PPPLLDPELEDKFTVVVDGEVVVLDDVTQQQNEDGWTPLHACCHSATTAAIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPLLSL 199          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S1TU65_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU65_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.940e-55
Identity = 100/244 (40.98%), Postives = 141/244 (57.79%), Query Frame = 1
Query:   85 EDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAA-KKMP 813
            E KF V +  E++ ++DVT  NE GWTPLHACCHS      G  +L EVV + GDLN +T++GPGSFN+ +TALHMA AYG+  +V+AL++AGAD +C+NS D                         + HIP+ +   G+ F++  P +                    G+ KD  N  GWTPLHEA + N L TV+ LL++GA+PT +N +GALP+ LA+   +R  ++EI GE+A  + MP
Sbjct:   93 EGKFMVAMGDEKVYIDDVTVTNEAGWTPLHACCHSVGAVAAGKEVLAEVVRVNGDLNARTERGPGSFNANWTALHMACAYGILPMVQALIEAGADVDCRNSIDXXXXXXXXXXXXXXXXXXXXXXXXXVNHIPDDECLSGSPFLQAPPTTALGEAARCGFSAIIKVLVEAGADKDLANHEGWTPLHEAAFHNHLGTVKTLLIYGANPTIRNKKGALPYQLAALPAVRTTIREIWGEDAVDESMP 336          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S3UV44_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV44_HETAK)

HSP 1 Score: 188 bits (478), Expect = 3.500e-54
Identity = 97/239 (40.59%), Postives = 131/239 (54.81%), Query Frame = 1
Query:   85 EDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGG-DLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEA 798
            E    + V  + + +ED  RQNE GW PLHACCHS  TA  G+ ++E + A GG D N +T +GPG FN+G+T LH+A+AYGV  +VE LL AGADPN +NS  W+PLLE CHRGF  + ++LV AG  + H+P+A+    A F+R  PQ+                    G+ KD+TN LGWT LH                          QGAL + L      ++ L+++GGE A
Sbjct:   99 EGLLALKVGEDTVYIEDPNRQNEAGWLPLHACCHSQATAAAGVALIEAMAASGGADWNARTARGPGPFNAGWTPLHIAAAYGVRPVVEELLAAGADPNVENSLTWTPLLECCHRGFTHLARVLVDAGARVDHLPDAEVCARAPFLRAPPQAPLAEAARVGAAEIVRLLLDRGADKDRTNALGWTALHXXXXXXXXXXXXXXXXXXXXXXXXXXQGALAYQLTVVPAAKQALRDMGGEAA 337          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S2XYQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ7_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.750e-53
Identity = 118/250 (47.20%), Postives = 152/250 (60.80%), Query Frame = 1
Query:   91 KFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVV--ALGGDL-NLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTPKFSL 831
            KF V V  + +  +DV   NE GW PLHACCH+   A  G  IL+E+V    G DL N KTK+GPG +N G+T LHMA AYG+  + EALL AGADPNC+NS                           L ++P+ D+S    F+R   Q    XXXXXXXXXXXXXXXXX   KD+ N+LGWTPLHEA +F + + VQ LLV+G D TAK   GA+ ++LAS   I++++K++GG EAA +M  P  S+
Sbjct:   58 KFGVKVQDKTLFFDDVNEANENGWLPLHACCHNQGLAGAGCEILDEMVRKGAGADLINAKTKRGPGPYNKGWTPLHMACAYGIPRVAEALLVAGADPNCQNSLTXXXXXXXXXXXXXXXXXXXXXXXAQLDYLPDIDSSTATPFVRAPAQHALAXXXXXXXXXXXXXXXXXXXPKDKANQLGWTPLHEAAFFCQKEIVQTLLVYGVDATAKTSMGAMAYHLASLPDIKQVIKDLGGAEAAVEMDQPLKSV 307          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A6H5JEM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM2_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.330e-47
Identity = 76/104 (73.08%), Postives = 89/104 (85.58%), Query Frame = 1
Query:  223 EEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQS 534
            +EVVA+GGDLN +TK+GPG+FNSGFT LHMA AYGV ++VEAL+KAGADPNC+N FDW PLLEVCHRGF  I  +LV+AG D+ HIP+A AS GAH MRGAPQS
Sbjct:   13 QEVVAMGGDLNPRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPLLEVCHRGFTAIAALLVKAGADVAHIPDAKASCGAHIMRGAPQS 116          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: D8LGQ2_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ2_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 3.010e-44
Identity = 76/96 (79.17%), Postives = 84/96 (87.50%), Query Frame = 1
Query:  598 SVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTPKFSLCVNEQGQMFVRVTAEQVD 885
            S KDQ N +GWTPLHEACYFN LDTVQLLLVHGADPT KN QGA+P+N+ S QPIR+LL+EIGGEEAAK MPTP FS+CVNEQGQMFVRVTA + D
Sbjct:    7 SDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEAD 102          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S2WT85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT85_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.340e-36
Identity = 82/242 (33.88%), Postives = 115/242 (47.52%), Query Frame = 1
Query:   79 DLEDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAK 804
            D   +F V+V  +++V++DVT  NE+GWTPLH+CCHS+TT   GL ILEE+      L +KTK+GP + NSG+TALHMASAYGV  +V  LL   A+ NC+NS                        G  +  +P+ +A+    F R  PQS                    G+ KDQ N +GWT                                  + LAS  P++E ++E+GGE+A +
Sbjct:   84 DYSGRFVVIVGDDKVVIDDVTVANEDGWTPLHSCCHSHTTVSAGLAILEEMSYRNASLEVKTKRGPSAHNSGWTALHMASAYGVEPLVVQLLAHRANANCRNSLQXXXXXXXXXXXXXXXXXXXXXXGASMSFVPDREAASNPPFSRPPPQSPLGEAARCGFTDICRILLDRGADKDQRNDVGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLASLPPVKEAIEELGGEDALR 325          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A2R5G6V1_9STRA (Ankyrin repeat domain-containing protein 27 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6V1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.740e-31
Identity = 79/218 (36.24%), Postives = 103/218 (47.25%), Query Frame = 1
Query:  121 IVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELL 774
            + L  +   NE GWT LHACCH          I+  +V  G D++ KT +GPGS+ +G+TALHMA AYG+  +V ALL AGAD    NS  W PL E  HRG+  I ++L++A      I  A      H    A                       G+  D  N  GWT LHEA +F     V+ L+ H  +   K  QG    +  S+  IRELL
Sbjct:  140 VALATIGEPNESGWTILHACCHQQACIPAAEKIIAVMVERGIDVDQKTTRGPGSYATGWTALHMACAYGLTPVVSALLAAGADVETTNSIGWKPLYEAVHRGYTDIARLLLKATATPDEIIPASLIAPYH----AQYPLAHACRQNHPEVVTVLLEAGGAHVDAQNEGGWTALHEAVFFRHEACVRTLIDHNCNLLIKTKQGYTALHFESAPAIRELL 353          
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A8K1C971_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C971_PYTOL)

HSP 1 Score: 128 bits (321), Expect = 7.460e-30
Identity = 90/296 (30.41%), Postives = 128/296 (43.24%), Query Frame = 1
Query:   88 DKFTVMVDGERIVLEDVT--RQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWS----------------------------------------PLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTPKFSLCVNEQG 849
            D   + V G++IVL+  T  + N +GWTPLHACCH+      G+ IL+E+V    DL+L T++GPGSF  GFT LH+A AYG+  +   L++AGA+ N KN+                                            PL E   +G V   K L++ GVD                                             K+  N LGWT +HEA Y NR+  V+LL+V+GAD   K  +G+L  ++  S  IR +L++I    AA    +PK      + G
Sbjct:   95 DFVVLYVSGDKIVLDKATLNQPNNDGWTPLHACCHTQNAQEAGITILKELVDRKADLSLVTRRGPGSFACGFTPLHIAVAYGLEALALKLIRAGANVNTKNTIGXXXXXXXXXXXXXXXXXXXXXXXAKHDVICPEFALCPYPGQYPLAEAARQGAVDTVKALLEWGVD---------------------------------------------KNAVNTLGWTAMHEAAYHNRVGVVKLLIVYGADVLIKTKKGSLARDVTISSEIRGMLEDI--TTAALAAASPKREKTAIQDG 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3ZT12_9STRA2.270e-7047.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D8LGQ3_ECTSI1.870e-6073.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TU65_9STRA6.940e-5540.98Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3UV44_HETAK3.500e-5440.59Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XYQ7_9STRA8.750e-5347.20Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5JEM2_9PHAE1.330e-4773.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGQ2_ECTSI3.010e-4479.17U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2WT85_9STRA1.340e-3633.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5G6V1_9STRA2.740e-3136.24Ankyrin repeat domain-containing protein 27 n=1 Ta... [more]
A0A8K1C971_PYTOL7.460e-3030.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66984contigH-elongata_contig66984:304..3060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue1.8e-50
Seed eggNOG ortholog2880.D8LGQ3
EggNOG free text desc.ankyrin repeats
EggNOG OGs2D5WU@1,2SZZ8@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size894
Cds size894
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.5377526-CDS-H-elongata_contig66984:303..4501622931059.5377526-CDS-H-elongata_contig66984:303..450Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 304..450 +
1691679681.1430292-CDS-H-elongata_contig66984:303..4501691679681.1430292-CDS-H-elongata_contig66984:303..450Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 304..450 +
1622931059.5536666-CDS-H-elongata_contig66984:809..8871622931059.5536666-CDS-H-elongata_contig66984:809..887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 810..887 +
1691679681.1544487-CDS-H-elongata_contig66984:809..8871691679681.1544487-CDS-H-elongata_contig66984:809..887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 810..887 +
1622931059.5697036-CDS-H-elongata_contig66984:1212..13131622931059.5697036-CDS-H-elongata_contig66984:1212..1313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 1213..1313 +
1691679681.1718225-CDS-H-elongata_contig66984:1212..13131691679681.1718225-CDS-H-elongata_contig66984:1212..1313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 1213..1313 +
1622931059.583206-CDS-H-elongata_contig66984:1634..17161622931059.583206-CDS-H-elongata_contig66984:1634..1716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 1635..1716 +
1691679681.1813152-CDS-H-elongata_contig66984:1634..17161691679681.1813152-CDS-H-elongata_contig66984:1634..1716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 1635..1716 +
1622931059.595618-CDS-H-elongata_contig66984:1981..21431622931059.595618-CDS-H-elongata_contig66984:1981..2143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 1982..2143 +
1691679681.1897132-CDS-H-elongata_contig66984:1981..21431691679681.1897132-CDS-H-elongata_contig66984:1981..2143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 1982..2143 +
1622931059.608461-CDS-H-elongata_contig66984:2519..26661622931059.608461-CDS-H-elongata_contig66984:2519..2666Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 2520..2666 +
1691679681.1976113-CDS-H-elongata_contig66984:2519..26661691679681.1976113-CDS-H-elongata_contig66984:2519..2666Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 2520..2666 +
1622931059.6236863-CDS-H-elongata_contig66984:2883..30601622931059.6236863-CDS-H-elongata_contig66984:2883..3060Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 2884..3060 +
1691679681.2053993-CDS-H-elongata_contig66984:2883..30601691679681.2053993-CDS-H-elongata_contig66984:2883..3060Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig66984 2884..3060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66984.14299.1prot_H-elongata_contig66984.14299.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig66984 304..3060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig66984.14299.1

>prot_H-elongata_contig66984.14299.1 ID=prot_H-elongata_contig66984.14299.1|Name=mRNA_H-elongata_contig66984.14299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp
NGKGSASTTSSGSDSSSIVPPPLIGPDLEDKFTVMVDGERIVLEDVTRQN
EEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFT
ALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKML
VQAGVDLMHIPNADASGGAHFMRGAPQSPLGEAARGGFTGICKFLIDAGS
VKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLAS
SQPIRELLKEIGGEEAAKKMPTPKFSLCVNEQGQMFVRVTAEQVDSH*
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mRNA from alignment at H-elongata_contig66984:304..3060+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig66984.14299.1 ID=mRNA_H-elongata_contig66984.14299.1|Name=mRNA_H-elongata_contig66984.14299.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2757bp|location=Sequence derived from alignment at H-elongata_contig66984:304..3060+ (Himanthalia elongata Himel1 dioecious)
AACGGGAAGGGCAGCGCAAGCACAACCAGTAGCGGTAGCGATAGCAGCAG CATCGTGCCTCCTCCCCTAATTGGCCCCGATTTGGAAGACAAGTTCACTG TGATGGTCGACGGGGAGAGAATCGTGCTCGAGGACGTCACGCGACAGGTG ATGGAGCGCCTGCGTAAAATGTTTGGTGCAAGCATCGCGGAGGGCGTACC GGAAGGCCGCGTTGTCGTCAGTGCTACGTATAATTTCGGTGGTGATTGCG GTTCAAAGGCGAAATCTCGACGAGTTTACGCATGCGCCATGCAATACCCC CCGTGGAAATATGGCGGGTCTTCGTGTCTTGATTAAACCAGCCTATCTCG CCTGCTCCAATACTCTTATTGCGAAGCGGGGATAGTAGGTGTGTGTGCGC GTCCCCAACTTAGGCTAACGTTGTGACAGCAACAAAAAATGCGACGAAAT ATTTCGAGAGACAGTTCATGCGCGGAGATTCGCTCCTACCAAACCCCGGC TCGCAGAATGAGGAAGGATGGACGCCGTTGCACGCTTGCTGCCACAGCAA TACTACAGCGGTCATTGGTCTTAACATTCTCGAGGTGGGCACTTAGATCT ATGACTGTGAATGGCCTTTGACGCCGCCGTAGTCATGTTGCATAAGATCG ACGACGTCAAAGGCGTGCCTGGAAACTCTGAAACTGGTAGCTGACAACGC CGAGGATTCCGTGGCGTTTTCTCCTCTAGTGAAGGCGACCCATAGGGCTG GTAACTATTTATTGACAAGCTTATCGTTTTTTTCGTCGCTGCGAAACATC GATACTTCCTCCACTAAACATCGATACGTCCTCCTCGCGGCGGACGCTCT GTTTAGTGTACCGTTGAAGCACGGATCAGAAATGCCGTAACATATTTACG GTGATGCAGGAGGTTGTGGCTCTTGGGGGAGACTTGAATCTCAAGACAAA AAAAGGCCCCGGAAGTTTCAACTCTGGCTTCACCGCGTTGCACATGGCCA GCGCCTACGGGTAAGCTTAAACAGGAAATATTCCGTTCGCCGTCATCTGA GTCCAGGAAAACGTTTACCCTTTGACGTCATCGTCAATACTGTATTAATC ATTCCTGTTATGGATGGCTAAACCGCGAGTTAAATTGCCGCCTTGAGGTA GCTGAGTCACAACAAGGGGGTTTTAGTTTAGTGAAATATTAGCAAGATTC TGCACCCAAACTAACGACCCGCACGTAAGAAACCGAGTGCCCACAATTGC ACACAATCGGCTTCGGGGGCCTGGACGTAAAGGCGCCAATATTTTCATCA TATAACTAACGCCTTTTGCGTGAAACCCCAGGGTGGCAGACATTGTGGAG GCGTTATTGAAGGCTGGAGCTGACCCCAACTGCAAAAACAGCTTCGACTG GAGTCCTCTTCTGGTGGGTGAATGGGTTGAATCGTTATCAATACCAGACT TGGTTGAGCTTCAAACCACAAAAAAACTGTTGCTGAGGTATCTTCACCAG TGGAGGACCCTGTGGGTTACAAGGTGACTGTATATCGGCGCACTCGGTAC AACGTACGATATACTGTTCGATCGAGAACTATCTGCAGATCTGACTTCGA CTGTATCTACATAATAAAATGCGTTGTTGCCCTTTTGGTTCTACCGTCTT ATCGGGGTCGCATTTGGCGAACAACCAGGAAGTTTGCCACCGCGGCTTCG TGGGCATAACGAAAATGCTCGTGCAGGCGGGGGTAGACCTTATGCACATC CCGAACGCGGATGCATCGGGAGGGGCACACTTCATGCGGGGAGCACCACA GTCCCCGCTGGGGGAGGCGGCTCGCGGGGGTTTCACCGGAGTGAGAAAAA ATACTTCATTGTTTTCTCGTTGAGTTAAACGTGGCTATTCCAAAATACGA TTATGGTACCTTATCTCAACTGCTTGTCCTTCAGGAGCGTTTTTATAATA GACGAAATTTCGTTGTCGTAAACTCGGGCAACGAGCCAAGGCGCTTCGAT CATATGACCCAGTAGTATCATTTAGCCGCGGGATGTAAATTGTAGGGAAC CCAGGCACTCGAAGCATGTTGAGATTGGACATCATGGCGTACCTTACTAT CTATATTAACAGTGAAACGACCCGCGGATTCCAACGGACTCCCTCCGCGC CATAAAAATATCCAAACAGGAATTACATATTATTTTATTATTTTCCGTGC AAATCCGTGCGAGCAGATCTGCAAATTCCTCATCGATGCTGGCAGCGTTA AGGACCAAACAAATCGCCTCGGTTGGACCCCGCTGCACGAGGCATGCTAC TTTAACCGCCTCGATACCGTGCAGCTTCTCCTGGTGCACGGTGCCGACCC TACCGCAAAAAACGTGAGAAGAGCCTCTAAATCATGGACGTGGAAATAAA AGCAGCATTTCCTACTATTAAACAACCTGTTGAGGAAGTGAATCTGTACA TATATCATGCCACTGCTTAACCACTCTCTATCTTTGCTGACTATACCTCT AAAAGAACATTTGTATACTTTACTAAAAATCCAACATGTGCTCTGAGTAC AAACAACGCACCGCCACGTGGGGAAAACAGGGTCAGGGCGCCTTGCCGTT CAACCTGGCAAGTTCTCAGCCAATCAGGGAGCTGCTGAAGGAGATCGGCG GGGAAGAGGCGGCGAAGAAGATGCCAACGCCGAAATTTTCTCTCTGCGTC AACGAGCAGGGGCAAATGTTTGTCCGCGTCACGGCTGAACAGGTGGACAG TCATTAA
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Coding sequence (CDS) from alignment at H-elongata_contig66984:304..3060+

>mRNA_H-elongata_contig66984.14299.1 ID=mRNA_H-elongata_contig66984.14299.1|Name=mRNA_H-elongata_contig66984.14299.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at H-elongata_contig66984:304..3060+ (Himanthalia elongata Himel1 dioecious)
AACGGGAAGGGCAGCGCAAGCACAACCAGTAGCGGTAGCGATAGCAGCAG
CATCGTGCCTCCTCCCCTAATTGGCCCCGATTTGGAAGACAAGTTCACTG
TGATGGTCGACGGGGAGAGAATCGTGCTCGAGGACGTCACGCGACAGAAC
GGGAAGGGCAGCGCAAGCACAACCAGTAGCGGTAGCGATAGCAGCAGCAT
CGTGCCTCCTCCCCTAATTGGCCCCGATTTGGAAGACAAGTTCACTGTGA
TGGTCGACGGGGAGAGAATCGTGCTCGAGGACGTCACGCGACAGAATGAG
GAAGGATGGACGCCGTTGCACGCTTGCTGCCACAGCAATACTACAGCGGT
CATTGGTCTTAACATTCTCGAGAATGAGGAAGGATGGACGCCGTTGCACG
CTTGCTGCCACAGCAATACTACAGCGGTCATTGGTCTTAACATTCTCGAG
GAGGTTGTGGCTCTTGGGGGAGACTTGAATCTCAAGACAAAAAAAGGCCC
CGGAAGTTTCAACTCTGGCTTCACCGCGTTGCACATGGCCAGCGCCTACG
GGAGGTTGTGGCTCTTGGGGGAGACTTGAATCTCAAGACAAAAAAAGGCC
CCGGAAGTTTCAACTCTGGCTTCACCGCGTTGCACATGGCCAGCGCCTAC
GGGGTGGCAGACATTGTGGAGGCGTTATTGAAGGCTGGAGCTGACCCCAA
CTGCAAAAACAGCTTCGACTGGAGTCCTCTTCTGGGTGGCAGACATTGTG
GAGGCGTTATTGAAGGCTGGAGCTGACCCCAACTGCAAAAACAGCTTCGA
CTGGAGTCCTCTTCTGGAAGTTTGCCACCGCGGCTTCGTGGGCATAACGA
AAATGCTCGTGCAGGCGGGGGTAGACCTTATGCACATCCCGAACGCGGAT
GCATCGGGAGGGGCACACTTCATGCGGGGAGCACCACAGTCCCCGCTGGG
GGAGGCGGCTCGCGGGGGTTTCACCGGAGAAGTTTGCCACCGCGGCTTCG
TGGGCATAACGAAAATGCTCGTGCAGGCGGGGGTAGACCTTATGCACATC
CCGAACGCGGATGCATCGGGAGGGGCACACTTCATGCGGGGAGCACCACA
GTCCCCGCTGGGGGAGGCGGCTCGCGGGGGTTTCACCGGAATCTGCAAAT
TCCTCATCGATGCTGGCAGCGTTAAGGACCAAACAAATCGCCTCGGTTGG
ACCCCGCTGCACGAGGCATGCTACTTTAACCGCCTCGATACCGTGCAGCT
TCTCCTGGTGCACGGTGCCGACCCTACCGCAAAAAACATCTGCAAATTCC
TCATCGATGCTGGCAGCGTTAAGGACCAAACAAATCGCCTCGGTTGGACC
CCGCTGCACGAGGCATGCTACTTTAACCGCCTCGATACCGTGCAGCTTCT
CCTGGTGCACGGTGCCGACCCTACCGCAAAAAACGGTCAGGGCGCCTTGC
CGTTCAACCTGGCAAGTTCTCAGCCAATCAGGGAGCTGCTGAAGGAGATC
GGCGGGGAAGAGGCGGCGAAGAAGATGCCAACGCCGAAATTTTCTCTCTG
CGTCAACGAGCAGGGGCAAATGTTTGTCCGCGTCACGGCTGAACAGGTGG
ACAGTCATTAAGGTCAGGGCGCCTTGCCGTTCAACCTGGCAAGTTCTCAG
CCAATCAGGGAGCTGCTGAAGGAGATCGGCGGGGAAGAGGCGGCGAAGAA
GATGCCAACGCCGAAATTTTCTCTCTGCGTCAACGAGCAGGGGCAAATGT
TTGTCCGCGTCACGGCTGAACAGGTGGACAGTCATTAA
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