mRNA_H-elongata_contig66984.14299.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S3ZT12_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.270e-70 Identity = 118/247 (47.77%), Postives = 158/247 (63.97%), Query Frame = 1
Query: 79 DLEDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTP 819
D ++F V V GERIV++DV R NE+GWTPLHACCH++ T L+IL+E+V L KT +GPG++ SG+T LHMA+AYGV +VEALL+AGAD N KN W+PLLE CHRGF GI + L+ L HIP+ +AS + PQS GS KD N LGWTPLHEA ++N +D + LLV+GA+ T K+ +GA+PF++AS +R++LKE+GG +A + P
Sbjct: 70 DYSERFHVTVSGERIVVDDVERANEDGWTPLHACCHNHQTMGAALDILKELVKRKASLERKTVRGPGAYASGWTVLHMAAAYGVEPLVEALLEAGADVNTKNDQGWTPLLEACHRGFDGIVRKLLTGNKTLDHIPDVEASKAFPLAKPPPQSALGEASRCGFEDIVKVLLEAGSDKDLVNHLGWTPLHEAAFYNHVDVARTLLVYGANATKKDARGAVPFHVASLPSVRDVLKELGGPDACPERDCP 316
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: D8LGQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ3_ECTSI) HSP 1 Score: 200 bits (508), Expect = 1.870e-60 Identity = 99/135 (73.33%), Postives = 116/135 (85.93%), Query Frame = 1
Query: 13 SASTTSSGSDSSSIVPPPLIGPDLEDKFTVMVDGERIVLEDVTRQ-NEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEV 414
S S TSSGS+ PPPL+ P+LEDKFTV+VDGE +VL+DVT+Q NE+GWTPLHACCHS TTA IGL ILEEVVA+GGDLNL+TK+GPG+FNSGFT LHMA AYGV ++VEAL+KAGADPNC+N FDW PLL +
Sbjct: 69 SFSRTSSGSEG----PPPLLDPELEDKFTVVVDGEVVVLDDVTQQQNEDGWTPLHACCHSATTAAIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPLLSL 199
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S1TU65_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU65_9STRA) HSP 1 Score: 197 bits (500), Expect = 6.940e-55 Identity = 100/244 (40.98%), Postives = 141/244 (57.79%), Query Frame = 1
Query: 85 EDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAA-KKMP 813
E KF V + E++ ++DVT NE GWTPLHACCHS G +L EVV + GDLN +T++GPGSFN+ +TALHMA AYG+ +V+AL++AGAD +C+NS D + HIP+ + G+ F++ P + G+ KD N GWTPLHEA + N L TV+ LL++GA+PT +N +GALP+ LA+ +R ++EI GE+A + MP
Sbjct: 93 EGKFMVAMGDEKVYIDDVTVTNEAGWTPLHACCHSVGAVAAGKEVLAEVVRVNGDLNARTERGPGSFNANWTALHMACAYGILPMVQALIEAGADVDCRNSIDXXXXXXXXXXXXXXXXXXXXXXXXXVNHIPDDECLSGSPFLQAPPTTALGEAARCGFSAIIKVLVEAGADKDLANHEGWTPLHEAAFHNHLGTVKTLLIYGANPTIRNKKGALPYQLAALPAVRTTIREIWGEDAVDESMP 336
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S3UV44_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV44_HETAK) HSP 1 Score: 188 bits (478), Expect = 3.500e-54 Identity = 97/239 (40.59%), Postives = 131/239 (54.81%), Query Frame = 1
Query: 85 EDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGG-DLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEA 798
E + V + + +ED RQNE GW PLHACCHS TA G+ ++E + A GG D N +T +GPG FN+G+T LH+A+AYGV +VE LL AGADPN +NS W+PLLE CHRGF + ++LV AG + H+P+A+ A F+R PQ+ G+ KD+TN LGWT LH QGAL + L ++ L+++GGE A
Sbjct: 99 EGLLALKVGEDTVYIEDPNRQNEAGWLPLHACCHSQATAAAGVALIEAMAASGGADWNARTARGPGPFNAGWTPLHIAAAYGVRPVVEELLAAGADPNVENSLTWTPLLECCHRGFTHLARVLVDAGARVDHLPDAEVCARAPFLRAPPQAPLAEAARVGAAEIVRLLLDRGADKDRTNALGWTALHXXXXXXXXXXXXXXXXXXXXXXXXXXQGALAYQLTVVPAAKQALRDMGGEAA 337
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S2XYQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ7_9STRA) HSP 1 Score: 184 bits (468), Expect = 8.750e-53 Identity = 118/250 (47.20%), Postives = 152/250 (60.80%), Query Frame = 1
Query: 91 KFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVV--ALGGDL-NLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTPKFSL 831
KF V V + + +DV NE GW PLHACCH+ A G IL+E+V G DL N KTK+GPG +N G+T LHMA AYG+ + EALL AGADPNC+NS L ++P+ D+S F+R Q XXXXXXXXXXXXXXXXX KD+ N+LGWTPLHEA +F + + VQ LLV+G D TAK GA+ ++LAS I++++K++GG EAA +M P S+
Sbjct: 58 KFGVKVQDKTLFFDDVNEANENGWLPLHACCHNQGLAGAGCEILDEMVRKGAGADLINAKTKRGPGPYNKGWTPLHMACAYGIPRVAEALLVAGADPNCQNSLTXXXXXXXXXXXXXXXXXXXXXXXAQLDYLPDIDSSTATPFVRAPAQHALAXXXXXXXXXXXXXXXXXXXPKDKANQLGWTPLHEAAFFCQKEIVQTLLVYGVDATAKTSMGAMAYHLASLPDIKQVIKDLGGAEAAVEMDQPLKSV 307
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A6H5JEM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM2_9PHAE) HSP 1 Score: 165 bits (417), Expect = 1.330e-47 Identity = 76/104 (73.08%), Postives = 89/104 (85.58%), Query Frame = 1
Query: 223 EEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQS 534
+EVVA+GGDLN +TK+GPG+FNSGFT LHMA AYGV ++VEAL+KAGADPNC+N FDW PLLEVCHRGF I +LV+AG D+ HIP+A AS GAH MRGAPQS
Sbjct: 13 QEVVAMGGDLNPRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPLLEVCHRGFTAIAALLVKAGADVAHIPDAKASCGAHIMRGAPQS 116
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: D8LGQ2_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ2_ECTSI) HSP 1 Score: 164 bits (414), Expect = 3.010e-44 Identity = 76/96 (79.17%), Postives = 84/96 (87.50%), Query Frame = 1
Query: 598 SVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTPKFSLCVNEQGQMFVRVTAEQVD 885
S KDQ N +GWTPLHEACYFN LDTVQLLLVHGADPT KN QGA+P+N+ S QPIR+LL+EIGGEEAAK MPTP FS+CVNEQGQMFVRVTA + D
Sbjct: 7 SDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEAD 102
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A7S2WT85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT85_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.340e-36 Identity = 82/242 (33.88%), Postives = 115/242 (47.52%), Query Frame = 1
Query: 79 DLEDKFTVMVDGERIVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAK 804
D +F V+V +++V++DVT NE+GWTPLH+CCHS+TT GL ILEE+ L +KTK+GP + NSG+TALHMASAYGV +V LL A+ NC+NS G + +P+ +A+ F R PQS G+ KDQ N +GWT + LAS P++E ++E+GGE+A +
Sbjct: 84 DYSGRFVVIVGDDKVVIDDVTVANEDGWTPLHSCCHSHTTVSAGLAILEEMSYRNASLEVKTKRGPSAHNSGWTALHMASAYGVEPLVVQLLAHRANANCRNSLQXXXXXXXXXXXXXXXXXXXXXXGASMSFVPDREAASNPPFSRPPPQSPLGEAARCGFTDICRILLDRGADKDQRNDVGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLASLPPVKEAIEELGGEDALR 325
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A2R5G6V1_9STRA (Ankyrin repeat domain-containing protein 27 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6V1_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.740e-31 Identity = 79/218 (36.24%), Postives = 103/218 (47.25%), Query Frame = 1
Query: 121 IVLEDVTRQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWSPLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELL 774
+ L + NE GWT LHACCH I+ +V G D++ KT +GPGS+ +G+TALHMA AYG+ +V ALL AGAD NS W PL E HRG+ I ++L++A I A H A G+ D N GWT LHEA +F V+ L+ H + K QG + S+ IRELL
Sbjct: 140 VALATIGEPNESGWTILHACCHQQACIPAAEKIIAVMVERGIDVDQKTTRGPGSYATGWTALHMACAYGLTPVVSALLAAGADVETTNSIGWKPLYEAVHRGYTDIARLLLKATATPDEIIPASLIAPYH----AQYPLAHACRQNHPEVVTVLLEAGGAHVDAQNEGGWTALHEAVFFRHEACVRTLIDHNCNLLIKTKQGYTALHFESAPAIRELL 353
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Match: A0A8K1C971_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C971_PYTOL) HSP 1 Score: 128 bits (321), Expect = 7.460e-30 Identity = 90/296 (30.41%), Postives = 128/296 (43.24%), Query Frame = 1
Query: 88 DKFTVMVDGERIVLEDVT--RQNEEGWTPLHACCHSNTTAVIGLNILEEVVALGGDLNLKTKKGPGSFNSGFTALHMASAYGVADIVEALLKAGADPNCKNSFDWS----------------------------------------PLLEVCHRGFVGITKMLVQAGVDLMHIPNADASGGAHFMRGAPQSXXXXXXXXXXXXXXXXXXXXGSVKDQTNRLGWTPLHEACYFNRLDTVQLLLVHGADPTAKNGQGALPFNLASSQPIRELLKEIGGEEAAKKMPTPKFSLCVNEQG 849
D + V G++IVL+ T + N +GWTPLHACCH+ G+ IL+E+V DL+L T++GPGSF GFT LH+A AYG+ + L++AGA+ N KN+ PL E +G V K L++ GVD K+ N LGWT +HEA Y NR+ V+LL+V+GAD K +G+L ++ S IR +L++I AA +PK + G
Sbjct: 95 DFVVLYVSGDKIVLDKATLNQPNNDGWTPLHACCHTQNAQEAGITILKELVDRKADLSLVTRRGPGSFACGFTPLHIAVAYGLEALALKLIRAGANVNTKNTIGXXXXXXXXXXXXXXXXXXXXXXXAKHDVICPEFALCPYPGQYPLAEAARQGAVDTVKALLEWGVD---------------------------------------------KNAVNTLGWTAMHEAAYHNRVGVVKLLIVYGADVLIKTKKGSLARDVTISSEIRGMLEDI--TTAALAAASPKREKTAIQDG 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66984.14299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66984.14299.1 >prot_H-elongata_contig66984.14299.1 ID=prot_H-elongata_contig66984.14299.1|Name=mRNA_H-elongata_contig66984.14299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp NGKGSASTTSSGSDSSSIVPPPLIGPDLEDKFTVMVDGERIVLEDVTRQNback to top mRNA from alignment at H-elongata_contig66984:304..3060+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66984.14299.1 ID=mRNA_H-elongata_contig66984.14299.1|Name=mRNA_H-elongata_contig66984.14299.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2757bp|location=Sequence derived from alignment at H-elongata_contig66984:304..3060+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66984:304..3060+ >mRNA_H-elongata_contig66984.14299.1 ID=mRNA_H-elongata_contig66984.14299.1|Name=mRNA_H-elongata_contig66984.14299.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at H-elongata_contig66984:304..3060+ (Himanthalia elongata Himel1 dioecious)back to top |