prot_H-elongata_contig66873.14289.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66873.14289.1
Unique Nameprot_H-elongata_contig66873.14289.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: D7FKZ0_ECTSI (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ0_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.410e-27
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    2 RRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            +RSM +LIHGDAAFAGQGVVYETMQ+SR  DFAVGG IHVIV    GFTT+P N RSTEYCSD+GKTFE+ +
Sbjct:  359 QRSMSVLIHGDAAFAGQGVVYETMQLSRVNDFAVGGTIHVIVNNQVGFTTDPRNSRSTEYCSDLGKTFEIPI 430          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A835Z9M1_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 7.100e-25
Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    3 RSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            ++M +L+HGDAAFAGQGVVYETMQ+ R  D++ GG IHVIV    GFTT+PEN RST+YCSD+GKTFE+ +
Sbjct:  376 KAMAVLLHGDAAFAGQGVVYETMQLMRVADYSTGGTIHVIVNNQVGFTTDPENDRSTDYCSDLGKTFEIPI 446          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A7S3DPD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPD1_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.120e-24
Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 MRRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            +R  +PIL+HGDAAFAGQGVVYETMQM+   DF VGG IHV+V    GFTTNP + RST YCSD+GK F   +
Sbjct:   15 IRNVVPILLHGDAAFAGQGVVYETMQMAHVDDFDVGGTIHVVVNNQIGFTTNPNHSRSTPYCSDLGKAFNCPI 87          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A482S454_9ARCH (2-oxoglutarate dehydrogenase E1 component (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S454_9ARCH)

HSP 1 Score: 104 bits (259), Expect = 1.160e-24
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    2 RRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            +R MP+L+HGDAAFAGQGVVYET+QM+R  DFAVGG IHVIV    GFTT+P NGRST+Y SD+ K F++ +
Sbjct:  380 KRHMPVLLHGDAAFAGQGVVYETLQMARVPDFAVGGTIHVIVNNQVGFTTDPRNGRSTQYSSDLAKAFDLPI 451          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A7S0SW70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SW70_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.050e-24
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    3 RSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            + MP+L+HGDAAFAGQGVVYETMQMS+  D+ VGG IHVIV    GFTT+P+NGRST Y SD+GK F + +
Sbjct:  200 KHMPVLLHGDAAFAGQGVVYETMQMSKVPDYDVGGTIHVIVNNQVGFTTDPKNGRSTLYSSDLGKAFNIPI 270          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A1E7FW89_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW89_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.280e-24
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 MRRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            +R  +PIL+HGDAAFAGQGVVYETMQ++   DFAVGG IHVIV    GFTTNP N RST YCSD+GK F   +
Sbjct:  412 VRNCVPILLHGDAAFAGQGVVYETMQLANVEDFAVGGTIHVIVNNQIGFTTNPINSRSTPYCSDLGKAFNCPI 484          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A7S1ZWD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWD4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.330e-24
Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    2 RRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            R  +PIL+HGDAAFAGQGVVYETMQ+++  DF VGG IHV+V    GFTTNP + RST YCSDIGK F   +
Sbjct:  107 RNVVPILLHGDAAFAGQGVVYETMQLAKVPDFDVGGTIHVVVNNQIGFTTNPVHSRSTPYCSDIGKAFGAPI 178          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A7S0GI93_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GI93_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.430e-24
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 MRRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            +R  +PIL+HGD+AFAGQGVVYETMQM++  DF VGG IHVIV    GFTTNP N RST YC+D+GKTF+  +
Sbjct:   44 VRNVVPILLHGDSAFAGQGVVYETMQMAKVRDFDVGGTIHVIVNNQIGFTTNPVNSRSTPYCTDLGKTFDCPI 116          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A7S2UVC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 9.940e-24
Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    3 RSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            ++MP+L+HGDAA AGQG+VYETMQMS+  +FA GG IHV+V    GFTT+P  GRST YC+DI K F V +
Sbjct:    9 KAMPVLLHGDAAVAGQGIVYETMQMSKVNNFAAGGTIHVVVNNQVGFTTDPSEGRSTMYCTDIAKAFGVPI 79          
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Match: A0A7S1MLS1_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MLS1_ALECA)

HSP 1 Score: 97.4 bits (241), Expect = 1.410e-23
Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    2 RRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIV----GFTTNPENGRSTEYCSDIGKTFEVSV 69
            +R MPI++HGDA+FAGQGVVYE+MQ+    DF VGG IHVIV    GFTT+P   RSTEYCSD+GK F V +
Sbjct:  102 KRVMPIIMHGDASFAGQGVVYESMQLGNVEDFDVGGTIHVIVNNQVGFTTDPRYSRSTEYCSDLGKAFGVPI 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66873.14289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKZ0_ECTSI1.410e-2775.00Oxoglutarate dehydrogenase (succinyl-transferring)... [more]
A0A835Z9M1_9STRA7.100e-2566.20Oxoglutarate dehydrogenase (succinyl-transferring)... [more]
A0A7S3DPD1_9STRA1.120e-2464.38Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A482S454_9ARCH1.160e-2466.672-oxoglutarate dehydrogenase E1 component (Fragmen... [more]
A0A7S0SW70_9STRA2.050e-2466.20Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1E7FW89_9STRA6.280e-2467.12Oxoglutarate dehydrogenase (succinyl-transferring)... [more]
A0A7S1ZWD4_9STRA6.330e-2465.28Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S0GI93_9STRA8.430e-2465.75Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2UVC3_9STRA9.940e-2461.97Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1MLS1_ALECA1.410e-2363.89Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 1..69
e-value: 1.7E-23
score: 85.0
IPR001017Dehydrogenase, E1 componentPFAMPF00676E1_dhcoord: 4..67
e-value: 3.2E-10
score: 39.4
IPR0116032-oxoglutarate dehydrogenase E1 componentPANTHERPTHR231522-OXOGLUTARATE DEHYDROGENASEcoord: 3..68
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 5..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66873contigH-elongata_contig66873:1876..2940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66873.14289.1mRNA_H-elongata_contig66873.14289.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66873 1876..2949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66873.14289.1 ID=prot_H-elongata_contig66873.14289.1|Name=mRNA_H-elongata_contig66873.14289.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
MRRSMPILIHGDAAFAGQGVVYETMQMSRTVDFAVGGAIHVIVGFTTNPE
NGRSTEYCSDIGKTFEVSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1
IPR0116032oxoglutarate_DH_E1
IPR029061THDP-binding