prot_H-elongata_contig118396.1419.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig118396.1419.1
Unique Nameprot_H-elongata_contig118396.1419.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: A0A6H5K4Q8_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q8_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.400e-25
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQVRHGVAHM 57
            V+L+YFQLGREDHRWWWRSF SGGSTGLF+Y YSFFYFFNRS MDGLLQ      +M
Sbjct:  101 VSLIYFQLGREDHRWWWRSFFSGGSTGLFVYGYSFFYFFNRSQMDGLLQSSFYFGYM 157          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: D8LTU6_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 3.700e-24
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQVRHGVAHM 57
            V+L+YFQLGREDHRWWWRSF SGGSTGLF+YAYSFFYFFNRS MDGLLQ      +M
Sbjct:  580 VSLIYFQLGREDHRWWWRSFFSGGSTGLFVYAYSFFYFFNRSQMDGLLQSSFYFGYM 636          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: F0YRK7_AURAN (Transmembrane 9 superfamily member n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRK7_AURAN)

HSP 1 Score: 92.4 bits (228), Expect = 8.190e-21
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQ 49
            V+LVYFQL RED+RWWWRS L GGSTG F+YAYSFFYFFNRS MDG++Q
Sbjct:  293 VSLVYFQLAREDYRWWWRSLLCGGSTGAFIYAYSFFYFFNRSSMDGMIQ 341          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: F0YMM4_AURAN (Transmembrane 9 superfamily member n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMM4_AURAN)

HSP 1 Score: 93.2 bits (230), Expect = 8.810e-21
Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQ 49
            V+LVYFQL RED+RWWWRS L GGSTG+F+YAYSFFYFFNRS MDG++Q
Sbjct:  502 VSLVYFQLAREDYRWWWRSLLCGGSTGVFIYAYSFFYFFNRSSMDGMIQ 550          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: A0A482SWT9_9ARCH (Transmembrane 9 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWT9_9ARCH)

HSP 1 Score: 88.6 bits (218), Expect = 1.400e-20
Identity = 35/57 (61.40%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQVRHGVAHM 57
            +AL+YFQL REDHRWWW + ++GG+TGLF++ YSF+YFF+RS+MDGLLQ+     +M
Sbjct:  105 IALLYFQLAREDHRWWWSALINGGATGLFVFGYSFYYFFHRSNMDGLLQLSFYFGYM 161          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: W7TPI4_9STRA (Transmembrane 9 superfamily member n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPI4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.880e-20
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQVRHGVAHM 57
            +AL+YFQL REDHRWWWR+FL+GG+TGLF+ AYSFFY+F RS+MDG  Q  +   +M
Sbjct:  383 IALIYFQLTREDHRWWWRTFLNGGATGLFILAYSFFYYFQRSEMDGFFQASYFFGYM 439          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: A0A4D9D4A1_9STRA (Transmembrane 9 superfamily member n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4A1_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.260e-20
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQVRHGVAHM 57
            +AL+YFQL REDHRWWWR+FL+GG+TGLF+ AYSFFY+F RS+MDG  Q  +   +M
Sbjct:  511 IALIYFQLTREDHRWWWRTFLNGGATGLFILAYSFFYYFQRSEMDGFFQASYFFGYM 567          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: A0A7S3K140_9STRA (Transmembrane 9 superfamily member n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K140_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 7.850e-20
Identity = 38/49 (77.55%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQ 49
            V+LVYFQL RED+RWWWRS L GG+TG F+YAYSFFYFF+RS+MDGL+Q
Sbjct:  504 VSLVYFQLAREDYRWWWRSLLCGGATGAFIYAYSFFYFFHRSNMDGLIQ 552          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: A0A812UHL6_SYMMI (Transmembrane 9 superfamily member n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UHL6_SYMMI)

HSP 1 Score: 89.7 bits (221), Expect = 8.560e-20
Identity = 37/49 (75.51%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQ 49
            +AL+YFQL REDHRWWWRSF +GG+TGL ++AYSFFYFF+RS MDG+LQ
Sbjct:  301 IALLYFQLVREDHRWWWRSFANGGATGLLIFAYSFFYFFHRSSMDGVLQ 349          
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Match: A0A5B6ZW78_DAVIN (Transmembrane 9 superfamily member n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZW78_DAVIN)

HSP 1 Score: 88.2 bits (217), Expect = 5.110e-19
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQVRHGVAHM 57
            VAL YFQL  EDH WWWRSFL GGSTGLF+YAYSF+Y++ RS M GLLQ      +M
Sbjct:  502 VALTYFQLAAEDHEWWWRSFLCGGSTGLFVYAYSFYYYYTRSHMSGLLQTSFFFGYM 558          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig118396.1419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4Q8_9PHAE1.400e-2577.19Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
D8LTU6_ECTSI3.700e-2478.95Transmembrane 9 superfamily member n=1 Tax=Ectocar... [more]
F0YRK7_AURAN8.190e-2179.59Transmembrane 9 superfamily member n=1 Tax=Aureoco... [more]
F0YMM4_AURAN8.810e-2179.59Transmembrane 9 superfamily member n=1 Tax=Aureoco... [more]
A0A482SWT9_9ARCH1.400e-2061.40Transmembrane 9 family protein n=1 Tax=archaeon Ta... [more]
W7TPI4_9STRA1.880e-2064.91Transmembrane 9 superfamily member n=1 Tax=Nannoch... [more]
A0A4D9D4A1_9STRA2.260e-2064.91Transmembrane 9 superfamily member n=1 Tax=Nannoch... [more]
A0A7S3K140_9STRA7.850e-2077.55Transmembrane 9 superfamily member n=1 Tax=Aureoum... [more]
A0A812UHL6_SYMMI8.560e-2075.51Transmembrane 9 superfamily member n=1 Tax=Symbiod... [more]
A0A5B6ZW78_DAVIN5.110e-1966.67Transmembrane 9 superfamily member n=2 Tax=Davidia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PFAMPF02990EMP70coord: 1..46
e-value: 8.9E-17
score: 60.9
IPR004240Nonaspanin (TM9SF)PANTHERPTHR10766TRANSMEMBRANE 9 SUPERFAMILY PROTEINcoord: 1..50
NoneNo IPR availablePANTHERPTHR10766:SF104TRANSMEMBRANE 9 SUPERFAMILY MEMBER 2coord: 1..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..57
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig118396contigH-elongata_contig118396:1412..1582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig118396.1419.1mRNA_H-elongata_contig118396.1419.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig118396 1412..1582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig118396.1419.1 ID=prot_H-elongata_contig118396.1419.1|Name=mRNA_H-elongata_contig118396.1419.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
VALVYFQLGREDHRWWWRSFLSGGSTGLFLYAYSFFYFFNRSDMDGLLQV
RHGVAHM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70