mRNA_H-elongata_contig66027.14193.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: D7G4V3_ECTSI (Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4V3_ECTSI) HSP 1 Score: 129 bits (324), Expect = 1.020e-32 Identity = 64/96 (66.67%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLEPREGKWVVVEAGLCFGGMAPTTVAAPRTEV 288
YRKVAME DEVIV V LPNA S P + EF+RPFKQARRREDDISIVT G+R+ LEPR GKW+V++ +CFGGMAPTTVAAP TEV
Sbjct: 493 YRKVAMEEDEVIVAVFLPNAASKXXXXXXSP--PPSTFEFIRPFKQARRREDDISIVTGGIRLMLEPRGGKWIVMDTSMCFGGMAPTTVAAPLTEV 586
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: A0A6H5JRC2_9PHAE (Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC2_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.360e-32 Identity = 66/95 (69.47%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLEPREGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRKVAME DEVIV V LPNAV S P + EF+RPFKQARRREDDISIVT G+R+ LE R GKWVV EA +CFGGMAPTTVAAP TE
Sbjct: 494 YRKVAMEEDEVIVAVFLPNAVSEK--GNDSQSSPPSTFEFIRPFKQARRREDDISIVTGGIRLVLETRGGKWVVKEASMCFGGMAPTTVAAPLTE 586
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: W7TFQ7_9STRA (Xanthine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.690e-20 Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVS-LEFVRPFKQARRREDDISIVTSGMRVRLEP-----REGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRKV M DEVI ++LP P S EFV P+KQARRREDDISIVT+ +RVRL P EG+WV+ EAG FGGMAPTTVAA +TE
Sbjct: 463 YRKVDMLEDEVIKTITLP---------------FPASRFEFVGPYKQARRREDDISIVTACLRVRLVPVASRSAEGRWVIEEAGFGFGGMAPTTVAAQKTE 548
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: R1EFE6_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EFE6_EMIHU) HSP 1 Score: 92.8 bits (229), Expect = 6.810e-20 Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLEP--REGK--WVVVEAGLCFGGMAPTTVAAPRT 282
YR+VA+E DEVIV +P+ LEFVRP+KQARRREDDISIV+ +RVRLEP REG+ WVV +A L +GG+APT V A +T
Sbjct: 338 YRRVALEPDEVIVSFFVPHC---------------APLEFVRPYKQARRREDDISIVSCALRVRLEPAQREGRGVWVVSDAALAYGGLAPTAVLAAKT 420
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: V9TG24_9ERIC (Xanthinine dehydrogenase (Fragment) n=10 Tax=Monotropeae TaxID=217039 RepID=V9TG24_9ERIC) HSP 1 Score: 83.2 bits (204), Expect = 2.310e-18 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLEPREGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRKV + DE+++ + LP EFV+ FKQA RR+DDI+IV +GMRV LE + GKWVV +A + +GG+AP +++A +T+
Sbjct: 46 YRKVGLASDEILLSIFLP---------------WTRPFEFVKEFKQAHRRDDDIAIVNAGMRVFLEEKNGKWVVSDASIAYGGVAPLSISAAKTK 125
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: A0A7R9U4K0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4K0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.300e-18 Identity = 49/95 (51.58%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLEPREGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRK A+ DEVIV + +P S+R E PFKQARRREDDISIVT G+R+ P EG+W V A LCFGGMA T AA +TE
Sbjct: 273 YRKTALRPDEVIVHIRVPL---SER------------YEIFMPFKQARRREDDISIVTGGIRICYAPEEGEWKVTRARLCFGGMAAVTKAAIKTE 352
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: M4C5A8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5A8_HYAAE) HSP 1 Score: 87.0 bits (214), Expect = 7.260e-18 Identity = 50/97 (51.55%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLE--PREGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRKV M DEVI GV +P E+V PFKQARRREDDISIVT+G+RVRLE R G W + EA +GGMAP T +A TE
Sbjct: 460 YRKVGMVPDEVITGVYVPYT---------------KKWEYVLPFKQARRREDDISIVTAGIRVRLECSRRTGDWTIEEASAVYGGMAPITKSASETE 541
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: A0A2K9EUH7_9LAMI (Xanthine Dehydrogenase (Fragment) n=25 Tax=Orobanchaceae TaxID=91896 RepID=A0A2K9EUH7_9LAMI) HSP 1 Score: 82.4 bits (202), Expect = 8.310e-18 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLEPREGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRKV + DE+++ V LP EFV FKQA RR+DDI+IV +GMRVRLE R+GKWVV +A +GG+AP ++ A T
Sbjct: 54 YRKVDLASDEILISVFLP---------------WNSKYEFVTEFKQAHRRDDDIAIVNAGMRVRLEERDGKWVVGDAMFVYGGVAPYSICANETR 133
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: A0A3R7FYU6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FYU6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.350e-17 Identity = 49/97 (50.52%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 1 YRKVAMELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISIVTSGMRVRLE--PREGKWVVVEAGLCFGGMAPTTVAAPRTE 285
YRKV ME DEVI V +P E++ PFKQARRREDDISIVT+G+RV LE P+ G WV+ A +GGMAP T AA TE
Sbjct: 419 YRKVGMEKDEVITSVYVPYT---------------KEYEYMLPFKQARRREDDISIVTAGIRVLLESSPQTGVWVISNASAVYGGMAPITKAATATE 500
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Match: A0A1E7F586_9STRA (Xanthine dehydrogenase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F586_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.520e-17 Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 1
Query: 112 LEFVRPFKQARRREDDISIVTSGMRVRLEPREGKWVVVEAGLCFGGMAPTTVAAPRT 282
E+V+PFKQARRREDDISIVTSGMR++L P++GK+++ A L FGGMAP TV A +T
Sbjct: 457 FEYVKPFKQARRREDDISIVTSGMRIKLVPKDGKFIIEHAALAFGGMAPKTVMAVKT 513 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66027.14193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66027.14193.1 >prot_H-elongata_contig66027.14193.1 ID=prot_H-elongata_contig66027.14193.1|Name=mRNA_H-elongata_contig66027.14193.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp MELDEVIVGVSLPNAVGSDRCSGKSDGDTPVSLEFVRPFKQARRREDDISback to top mRNA from alignment at H-elongata_contig66027:2709..3002- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66027.14193.1 ID=mRNA_H-elongata_contig66027.14193.1|Name=mRNA_H-elongata_contig66027.14193.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=294bp|location=Sequence derived from alignment at H-elongata_contig66027:2709..3002- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66027:2709..3002- >mRNA_H-elongata_contig66027.14193.1 ID=mRNA_H-elongata_contig66027.14193.1|Name=mRNA_H-elongata_contig66027.14193.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at H-elongata_contig66027:2709..3002- (Himanthalia elongata Himel1 dioecious)back to top |