mRNA_H-elongata_contig65362.14122.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: D8LGE2_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE2_ECTSI) HSP 1 Score: 303 bits (776), Expect = 5.930e-94 Identity = 146/249 (58.63%), Postives = 185/249 (74.30%), Query Frame = 2
Query: 230 KLVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQDAVEIKESPKDTIHKILK----EHKPTLEKVTVLGHSLGGAVCQLCAVDIAHSKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKE-GFGPNHNLQMYLHNIDPTRDVSLMNKVGNVIPEAFCCKHNISPSWHSLSWPRTVF 961
++VIVFRGT T KEWIENAT MEQL+GEP E+ +L NR LMVH GFQ +Y + A + SPKD I+++++ + K ++EKVTV+GHSLG A+ Q CAVD+AHS++L D+PI +AW AP+ GN LA WVAK P LRILR+ V D V +PP W+ + GG+ HMGTEI L N+HL + G+V + G PNHNLQ YLHNIDPTRDV+LMNKVGNVIP+ +C KH ISPSWHSL++PRTV+
Sbjct: 174 EMVIVFRGTETTKEWIENATLFMEQLDGEPPESGLALLLNRDTLMVHSGFQQLYREKADQF-PSPKDKIYEVIEAFKNDDKVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLAWAAPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITTGGYKHMGTEITLDNTHLHKAGVVKSDDGNSPNHNLQQYLHNIDPTRDVALMNKVGNVIPDDYCRKHGISPSWHSLTFPRTVY 421
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: A0A6H5KDS9_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS9_9PHAE) HSP 1 Score: 298 bits (762), Expect = 1.130e-91 Identity = 143/250 (57.20%), Postives = 182/250 (72.80%), Query Frame = 2
Query: 230 KLVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQDAVEIKESPKDTIHKILK----EHKPTLEKVTVLGHSLGGAVCQLCAVDIAHSKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKE-GFGPNHNLQMYLHNIDPTRDVSLMNKVGNVIPEAFCCKHNISPSWHSLSWPRTVFD 964
+LVIVFRGT T KEWIENAT MEQL+GEP E+ +L NR LMVH GFQ +Y + A SPKD I+++++ ++K ++EKVTV+GHSLG A+ Q CAVD+AHS++L D+PI + W P+ GN LA WVAK P LRILR+ V D V +PP W+ + GG+ HMGTEI L N+HL + G+V + G PNHNLQ YLHNIDPTRDV+LMNKVG VIP+ +C KH ISPSWHSL++PRT++
Sbjct: 189 ELVIVFRGTETTKEWIENATLFMEQLDGEPPESGLALLLNRNTLMVHSGFQQLYREKADHF-PSPKDKIYEVIEAFKNDNKVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLGWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSMTAGGYKHMGTEITLDNTHLHKAGVVKSDDGNSPNHNLQQYLHNIDPTRDVALMNKVGTVIPDDYCRKHGISPSWHSLTFPRTIYS 437
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: D7FQN1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN1_ECTSI) HSP 1 Score: 269 bits (687), Expect = 6.660e-81 Identity = 127/248 (51.21%), Postives = 179/248 (72.18%), Query Frame = 2
Query: 224 GVKLVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQDAVEIKESPKDTIHKILKE--HKPTLEKVTVLGHSLGGAVCQLCAVDIAHSKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKE-GFGPNHNLQMYLHNIDPTRDVSLMNKVGNVIPEAFCCKHNISPSWHSLSWPRTV 958
G ++V+VFRGT T+KEW NA M LEG + + E+ + R NLM H GFQ +Y+ ESP+ IH+ +K+ K ++KVTV+GHSLG A+CQLCA+D+A+S + DIPI +AWGAP++GNK LATWV + P LRILRISV+ D+V +LPP W+G +GG+ GTE++LSN ++++GL+ + G P+H L+ YLH I+P+RDV+L+NK NV+PE +C +HNI+P+WHS +WPRTV
Sbjct: 147 GKEMVVVFRGTETVKEWARNAKVKMVPLEGAKQLSTLELGWARWNLMCHEGFQQLYIGKPKHF-ESPRTVIHEQIKKWVEKGRVDKVTVVGHSLGAAMCQLCAIDLAYSNVGGDIPILALAWGAPKVGNKTLATWVTEQPNLRILRISVAVDTVIRLPPDWVGFLLSGGYKATGTELILSNMQMQKQGLLRLDVGNSPHHCLEQYLHVIEPSRDVALLNKTCNVLPEEYCLEHNIAPAWHSQTWPRTV 393
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: UPI000901926E (phospholipase A1-IIgamma-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901926E) HSP 1 Score: 102 bits (253), Expect = 1.190e-19 Identity = 72/259 (27.80%), Postives = 136/259 (52.51%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQN-LMVHVGFQSIYV---QDAVEIKESPKDTIH----KILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIAHSKIL----EDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPP-GW-LGTFFNG--GFHHMGTEIVLSNSHLREKGLVMKEGFGPNHNLQMYLHNID-----PTRD--VSLMNKVGNVIPEAFCCKHNISPSWHSL 940
+V+V+RGT L EWI++A F+ + ++F + + +VH+G+ S+Y QD+ ++S +D + ++++ +K +TV GHSLG ++ L AVD+A + + +D+P+T + +P++G++ + LR LRIS D VP LPP GW +G + + +G +V+ + +K + +K H+L +Y+H +D PT D V+ +NK + + + + +H I W ++
Sbjct: 129 IVVVWRGTIRLLEWIDDAIFLFDNA---------PLIFGQNSDPLVHMGWYSMYTTTNQDSPFNQKSARDQVREEVARLVELYKDEEISITVTGHSLGSSMATLNAVDLAANPVNNNNNKDVPVTAFLYASPKVGDENFKKAFSNQQNLRALRISDVKDKVPTLPPIGWKVGETIDSKIDYEDVGVGLVIES----KKSVYLKPTGLNYHDLMLYMHGVDLYETTPTGDFDVAKVNKYQDALTDDYVKEHGIPAGWFNV 374
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: A0A2U1N305_ARTAN (Phospholipase A1 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1N305_ARTAN) HSP 1 Score: 100 bits (249), Expect = 1.880e-18 Identity = 70/243 (28.81%), Postives = 116/243 (47.74%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQDAVEIKESPKDTIHKILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIAH-------SKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKEGFGPNHNLQM-YLH------------NIDPTRDVSLMNKVGNVIPEAF 901
+++ +RGT + EW+EN F P + ++ VH G+ SIY + + ++++++K +TV+GHSLGGA+ L DIAH S+ + IP+T A+G P +GN CL +K L ILR+ D +P LPP F G+ H+G E+ + H + L E + HN++ YLH ++ RD++L+NK N++ + +
Sbjct: 426 IIVSWRGTIQISEWLENFDF--------PLVSASDVFKGSICAQVHSGYLSIYTSIKPNSRFNKTSARDQLVEKYKDEETSITVIGHSLGGALATLTGGDIAHNGYNKPNSESKKPIPVTVFAYGNPFLGNICLRELYSKQEDLHILRVVNVIDPIPLLPP-----FV--GYIHIGHELYID--HRKSVYLKPTENYAKRHNMEAAYLHALAGSHGIEAEFKLEVERDIALVNKRSNLLKDEY 651
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: UPI001CB90D89 (phospholipase A1-IIgamma-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB90D89) HSP 1 Score: 96.3 bits (238), Expect = 1.550e-17 Identity = 74/257 (28.79%), Postives = 122/257 (47.47%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQ---DAVEIKESPKD----TIHKILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIA-------HSKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMK--EGFGPNHNLQM-YLHNI------------DPTRDVSLMNKVGNVIPEAFCCKHN 916
+++ +RGT EW+EN F P + + + VH GF SIY+ D+ K S +D T+ +++++++ +TV+GHSLGGA+ L DIA S+ + +P+T A+G P +GN CL + K LRILR D +P LPP G+ H+G E+ + K + +K E + HN++ YLH + + RD++L+NK N++ + + N
Sbjct: 136 IMVSWRGTIQAAEWVENFDF--------PLVSASSVFKESKCTQVHSGFLSIYISSHPDSRFNKTSARDQVLSTVKQLVEKYEEEETSITVIGHSLGGALATLSGGDIAVNGYNKPKSENKKPVPVTVFAYGNPFLGNLCLHELLNKQEHLRILRTVNVIDYIPLLPPLV-------GYIHVGRELYIDT----RKSVYLKPTENYAKRHNMEASYLHGLAGSHGVNGEFRLEVDRDIALINKRSNLLKKHYMIPEN 373
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: A0A4D6L4E3_VIGUN (Phospholipase A1 n=2 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6L4E3_VIGUN) HSP 1 Score: 94.7 bits (234), Expect = 3.320e-17 Identity = 68/240 (28.33%), Postives = 110/240 (45.83%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQD-------AVEIKESPKDTIHKILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIAHS--KILED-----IPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKEGFGPNHNLQMYLH------------NIDPTRDVSLMNK 874
+V+ +RGT EW++N F + ++F VH GF S+Y + ++ + + ++++++K ++V GHSLGGA+ L AVDI I ++ P+T + +PR+GN +K+ LR LRI D VPKLP G +G E+V+ K +K+G HNL++YLH N++ RD+SL+NK
Sbjct: 135 IVVAWRGTVQGSEWVQNLDFPSDPA---------PLIFPDARAEVHTGFYSLYTSNNPASPITQTSVRNQVLEEVGRLVEKYKDEEISISVTGHSLGGALATLTAVDIIGQGLNIRKEQPHRICPVTAFLFASPRVGNSHFGKIFSKYKHLRALRIRNKKDQVPKLPIG---------LTVVGEELVIDT----RKSKYLKDGVSA-HNLEVYLHGVAGTQGKKGGFNLEVNRDISLLNK 351
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: UPI000D62F2B9 (phospholipase A1-IIgamma-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62F2B9) HSP 1 Score: 95.5 bits (236), Expect = 3.860e-17 Identity = 71/250 (28.40%), Postives = 118/250 (47.20%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQ-------DAVEIKESPKDTIHKILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIA-------HSKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKEGFGPNHNLQM-YLH------------NIDPTRDVSLMNKVGNVIPEAF 901
+++ +RGT + EW+EN F P + ++ VH G+ SIY + ++ + ++++++K +TV+GHSLGGA+ L DIA S+ + IP+T A+G P +GN CL + K KL ILR+ D +P LPP F G+ H+G E+ + + K L E + HN++ YLH ++ RD++L+NK N++ E +
Sbjct: 137 ILVSWRGTIQIAEWVENFDF--------PLVSASKVFKQSICAQVHSGYLSIYTSSNSRSRFNKTSARDQVLSMVRQLVEKYKDEETSITVVGHSLGGALATLSGGDIAINGYNETKSRPKKTIPVTVFAYGNPFLGNICLRELLHKKEKLNILRVVNVIDYIPLLPP-----FV--GYIHIGQELWVDTR--KSKYLKPTESYAKRHNMEAAYLHALAGSHGIEAEFRLEVDRDLALVNKRSNLLKEEY 369
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: A0A2J6M3X9_LACSA (Phospholipase A1 n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6M3X9_LACSA) HSP 1 Score: 91.3 bits (225), Expect = 9.060e-16 Identity = 72/251 (28.69%), Postives = 113/251 (45.02%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGE-PEEACFEMLFNRQNLMVHVGFQSIYVQ-------DAVEIKESPKDTIHKILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIA-------HSKILEDIPITCIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSHLREKGLVMKEGFGPNHNLQM-YLHNIDP------------TRDVSLMNKVGNVIPEAF 901
+VI +RGT + EWIEN F ++ P C + H GF SIY + ++ TI ++++ +K +TV+GHSLGGA+ L DIA S+ + P+T A+G P +GN CL + K L ILR D + LPP G+ H+G ++V+ + L E + HN++ YLH + TRD++L+NK N++ + +
Sbjct: 136 IVISWRGTIQISEWIENFDFPLKPTTKVFPTSTC---------ALAHSGFLSIYTSSHPNSRFNKTSARDQVVSTIKRLVERYKDEDVSITVIGHSLGGALATLTGGDIAVNGYNKPTSRPNKSFPVTVFAYGNPILGNICLRELLHKQENLHILRTVNMIDFIQFLPPLI-------GYEHIGHKLVIDTR--KSPYLKAIESYAKRHNMEASYLHGLAGSHGVDKEFKLVITRDLALVNKRTNLLKDEY 368
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Match: UPI001FB09DAF (phospholipase A1-IIbeta-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB09DAF) HSP 1 Score: 90.1 bits (222), Expect = 1.020e-15 Identity = 70/251 (27.89%), Postives = 110/251 (43.82%), Query Frame = 2
Query: 233 LVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNLMVHVGFQSIYVQDA-------VEIKESPKDTIHKILKEHKPTLEKVTVLGHSLGGAVCQLCAVDIAHS--KILEDIPIT----CIAWGAPRIGNKCLATWVAKHPKLRILRISVSNDSVPKLPPGWLGTFFNGGFHHMGTEIVLSNSH---LREKGLVMKEGFGPNHNLQMYLHNIDPT------------RDVSLMNKVGNVIPEAF 901
+V+ +RGT EW+ N + + P F L VH GF +Y + + +++ + +++ +K V V GHSLGGA+ L A+DIA + K +D IT A+ +PRIG L A L ILRI D+VP P N G+ +G + + L+ KG + +G HN+++YLH + T RD+SL+NK G + + +
Sbjct: 119 IVVAWRGTNEDSEWLNNVGILQQ-----PASLIFGDLEEDDIPWVHGGFYLMYTSNNPDSTFSNISVRDQVLQEVSRLVSMYKNEKISVVVTGHSLGGALTTLNAIDIARNVFKNQDDHSITNLVTAFAFASPRIGGSMLRDSTASLKNLHILRIENKPDAVPDFP--------NIGYRDVGQVLFMDTEESEFLKRKGFISSKGMA--HNMEIYLHGVSGTQGIKTEFKKVVERDISLVNKHGENLVDIY 354 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65362.14122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65362.14122.1 >prot_H-elongata_contig65362.14122.1 ID=prot_H-elongata_contig65362.14122.1|Name=mRNA_H-elongata_contig65362.14122.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp MQSRLGVKLVIVFRGTGTLKEWIENATFMMEQLEGEPEEACFEMLFNRQNback to top mRNA from alignment at H-elongata_contig65362:50..2643+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65362.14122.1 ID=mRNA_H-elongata_contig65362.14122.1|Name=mRNA_H-elongata_contig65362.14122.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2594bp|location=Sequence derived from alignment at H-elongata_contig65362:50..2643+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65362:50..2643+ >mRNA_H-elongata_contig65362.14122.1 ID=mRNA_H-elongata_contig65362.14122.1|Name=mRNA_H-elongata_contig65362.14122.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1518bp|location=Sequence derived from alignment at H-elongata_contig65362:50..2643+ (Himanthalia elongata Himel1 dioecious)back to top |