prot_H-elongata_contig6528.14115.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A6H5K2C5_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2C5_9PHAE) HSP 1 Score: 236 bits (603), Expect = 1.690e-73 Identity = 141/264 (53.41%), Postives = 175/264 (66.29%), Query Frame = 0
Query: 1 MAPTGYLTTCIVLVAIATADLLTGVSAFAGVLRSGL-RVPHDCS---SSSAVTAARSSARRASV---GISARRRRLPSFTLSMAPP-DTMEAEDGRETIANQDPELHGEVGDTFVKCGKCQACYAIDVEVLGRGRVIECSVCGNTWFQSVERTLTLTQNFLMKNWSEERTRDARTKAAAAPALGFDLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAAVSNS 256
M T + C+VL A+ T ++ GV AF+G LR + + PHDCS SSS V+ + A+V G LSMAPP D AE + DP L G GDT+VKCGKCQACY ++++VLGRGR+IECSVCGN WFQ+ ER LTLT+NFLMK+W+E+R A T AA GF+LFV NIPFSVSEKDL AIFGNFG+V S +L DE +S+G+G VKM +E DG+KAI ALNG+ IQGR++LVK SNS
Sbjct: 32 MGRTRHAGLCLVLAALTTMAVIPGVGAFSGGLRVAITQQPHDCSMVASSSTVSPRPLNPAAAAVTPSGXXXXXXXXSPTALSMAPPMDFGGAEPAEKDPREMDPSLQGSAGDTYVKCGKCQACYPMELDVLGRGRIIECSVCGNRWFQTAERALTLTENFLMKDWTEDRV--AATAEAAKNFAGFNLFVGNIPFSVSEKDLGAIFGNFGEVKSTALVTDENGDSRGYGSVKMGTEEDGRKAIKALNGIEIQGRSMLVKVGASNS 293
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A7R9WVI4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVI4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 8.330e-21 Identity = 61/187 (32.62%), Postives = 97/187 (51.87%), Query Frame = 0
Query: 81 TMEAEDGRET-----IANQDPELHGEVG------DTFVKCGKCQACYAIDVEVLG--RGRVIECSVCGNTWFQSVERTLTLTQNFLMKNWSE---ERTRDARTKAAAAPALG-FDLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK 250
T+ D ET AN D + G T+ +CG+C +A+ + LG RGR +ECSVCG+TW+QS +R + F + + E +R + + + +G L+V NI F+ +E+D+ F G V SL +D+ ++GFG + M ++ G+KAI L+G + GRNI V+
Sbjct: 35 TLRMADASETPAPAPAANTDATTQSKYGVSIDMPSTYARCGRCDTSFALAPDDLGNGRGRRLECSVCGHTWYQSKDRLSNMNGGFEIIDLPETDLQRIANNIEEGRSPKFVGEMKLYVGNIAFTCTEQDMQEAFSEAGDVGEVSLVRDDEGRNRGFGFITMRTKEGGEKAIELLDGASVNGRNIAVR 221
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A7S1Z4Z8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4Z8_TRICV) HSP 1 Score: 92.4 bits (228), Expect = 1.040e-18 Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 0
Query: 84 AEDGRETIANQDPELHGEVGDTFVKCGKCQACYAIDVEVLG---RGRVIECSVCGNTWFQSVERTLTLTQNFLMKNWSEERTRDARTKAAAAPALGF----DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK 250
A R+ + +D + G T+V+CG+C A YAI + LG +GR +ECSVCG++W+QS +R L+ F + + + ++ A F +V N+ + E+ + F G V SL DE S+GF V M +E DG+KA+ L+G + GRNI V+
Sbjct: 62 ASGARQKMYGKDLAMPG----TYVQCGRCHAAYAIQEDDLGDRGKGRRVECSVCGHSWYQSRDRLFGLSTGFEYRPFPQSDVVRVKSNLEAGRPADFRGVAKFYVGNLDYGTDEESVRVHFETAGTVGDVSLITDEDGRSRGFAFVTMMTEEDGEKAV-QLDGTELAGRNISVR 230
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A6V2PYU0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PYU0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.780e-17 Identity = 52/154 (33.77%), Postives = 88/154 (57.14%), Query Frame = 0
Query: 104 DTFVKCGKCQACYAIDVEVLG---RGRVIECSVCGNTWFQSVERTLTLTQNF-LMKNWSEERTRDARTKAAAA-PALGFD--LFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK 250
+T+ +CG+C +A+ E LG +GR +ECSVCG++W+Q+ ++ + + F L++ + +R R AA P D L+V N+ F V+E+DL F +V ++ D+ SKGF V M ++ G+KA+ L+G + GRN+ V+
Sbjct: 64 ETYARCGRCSTSFALTSEDLGDRGKGRRVECSVCGHSWYQARDKLFDIREGFELVELPQSDVSRIERNIAADRDPRFTGDSKLYVGNLDFKVTEEDLFEEFSKVDEVGDVTIITDDSGRSKGFAFVTMLTKEGGEKALEKLDGEEVFGRNLNVR 217
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A523K038_9GAMM (RNA-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523K038_9GAMM) HSP 1 Score: 72.4 bits (176), Expect = 1.060e-12 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 0
Query: 178 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 252
+++V N+P+SVSE DL A F +FG+VSSA++ D + +SKGFG V+M S+++ ++AI ALN GRNI V A
Sbjct: 2 NIYVGNLPYSVSEDDLRAAFADFGEVSSANVIMDRMSGQSKGFGFVEMPSDSEAEEAINALNDSAFNGRNIKVNQA 77
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: I4AKB7_BERLS (RRM domain-containing RNA-binding protein n=3 Tax=Cytophagales TaxID=768507 RepID=I4AKB7_BERLS) HSP 1 Score: 72.4 bits (176), Expect = 1.210e-12 Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 178 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKD-ELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAAV 253
+L+V+N+P+S+SE++L A+F G V+S + D E S+GFG V+MESE DG+ AI LNG+ ++GR I VK A+
Sbjct: 2 NLYVSNLPYSISEEELEAVFSELGVVTSTKIITDRETRRSRGFGFVEMESEEDGEAAIEELNGVELKGREIQVKKAI 78
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A2D5XWZ7_9ARCH (RNA-binding protein n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D5XWZ7_9ARCH) HSP 1 Score: 70.1 bits (170), Expect = 1.450e-11 Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 0
Query: 179 LFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAAVSNSGS 258
+FV N+PFSV +DL IF G+VS A++ D S+GFG V E++ADG KAI A+NG ++GR + V A GS
Sbjct: 1 MFVGNLPFSVKSEDLKQIFSEHGEVSEAAVITDRFSGRSRGFGFVTFENDADGDKAIEAMNGKDVEGREMTVNEARPQGGS 81
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A0F2NE14_9DELT (RNA-binding protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A0F2NE14_9DELT) HSP 1 Score: 68.9 bits (167), Expect = 2.520e-11 Identity = 35/75 (46.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 179 LFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 252
L+V N+ + ++E+DL +F FGQV SA++ KD+ +SKGFG V+M+++A+ Q AI ALNG ++GR I+V A
Sbjct: 3 LYVGNLSYEITEQDLQQMFEQFGQVGSANIIKDKYSGQSKGFGFVEMDAQAEAQAAIEALNGKEMKGRAIIVNEA 77
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A533U5R3_CHLSQ (RNA-binding protein n=1 Tax=Chlorobium sp. TaxID=1095 RepID=A0A533U5R3_CHLSQ) HSP 1 Score: 68.2 bits (165), Expect = 3.740e-11 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0
Query: 178 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 252
++++ N+P+SV+E DL F FGQV+SA++ D+ SKGFG V M S+++G++AIGA+N +GR I V A
Sbjct: 2 NIYIGNLPYSVTEDDLREAFSQFGQVNSANIITDKFSGRSKGFGFVDMPSDSEGREAIGAMNDKDFKGRTIKVNEA 77
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A6H9LCB5_9BACT (RNA-binding protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A6H9LCB5_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 7.200e-11 Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 0
Query: 178 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKD-ELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 252
+L+V N+ + SE+DL A+F FG++ S ++ KD + +SKGF V+M S +D KAI ALNG ++GRN+ + A
Sbjct: 2 NLYVGNLSYETSEEDLKALFDEFGEIESVNVIKDRQTGQSKGFAFVEMPSNSDADKAIKALNGQDLKGRNLKINQA 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6528.14115.1 ID=prot_H-elongata_contig6528.14115.1|Name=mRNA_H-elongata_contig6528.14115.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bpback to top |