mRNA_H-elongata_contig6528.14115.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6528.14115.1
Unique NamemRNA_H-elongata_contig6528.14115.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A6H5K2C5_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2C5_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.650e-70
Identity = 141/264 (53.41%), Postives = 175/264 (66.29%), Query Frame = 3 
Query:   21 MAPTGYLTTCIVLVAIATADLLTGVSAFAGVLRSGL-RVPHDCS---SSSAVTAARSSARRASV---GISARRRRLPSFTLSMAPP-DTMEAEDGRETIANQDPELHGEVGDTFVKCGKCQACYAIDVEVLGRGRVIECSVCGNTWFQSVERTLTLTQNFLMKNWSEERTRDARTKAAAAPALGFDLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAAVSNS 788
            M  T +   C+VL A+ T  ++ GV AF+G LR  + + PHDCS   SSS V+    +   A+V   G            LSMAPP D   AE   +     DP L G  GDT+VKCGKCQACY ++++VLGRGR+IECSVCGN WFQ+ ER LTLT+NFLMK+W+E+R   A T  AA    GF+LFV NIPFSVSEKDL AIFGNFG+V S +L  DE  +S+G+G VKM +E DG+KAI ALNG+ IQGR++LVK   SNS
Sbjct:   32 MGRTRHAGLCLVLAALTTMAVIPGVGAFSGGLRVAITQQPHDCSMVASSSTVSPRPLNPAAAAVTPSGXXXXXXXXSPTALSMAPPMDFGGAEPAEKDPREMDPSLQGSAGDTYVKCGKCQACYPMELDVLGRGRIIECSVCGNRWFQTAERALTLTENFLMKDWTEDRV--AATAEAAKNFAGFNLFVGNIPFSVSEKDLGAIFGNFGEVKSTALVTDENGDSRGYGSVKMGTEEDGRKAIKALNGIEIQGRSMLVKVGASNS 293
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A7R9WVI4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVI4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.340e-19
Identity = 61/187 (32.62%), Postives = 97/187 (51.87%), Query Frame = 3 
Query:  261 TMEAEDGRET-----IANQDPELHGEVG------DTFVKCGKCQACYAIDVEVLG--RGRVIECSVCGNTWFQSVERTLTLTQNFLMKNWSE---ERTRDARTKAAAAPALG-FDLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK 770
            T+   D  ET      AN D     + G       T+ +CG+C   +A+  + LG  RGR +ECSVCG+TW+QS +R   +   F + +  E   +R  +   +  +   +G   L+V NI F+ +E+D+   F   G V   SL +D+   ++GFG + M ++  G+KAI  L+G  + GRNI V+
Sbjct:   35 TLRMADASETPAPAPAANTDATTQSKYGVSIDMPSTYARCGRCDTSFALAPDDLGNGRGRRLECSVCGHTWYQSKDRLSNMNGGFEIIDLPETDLQRIANNIEEGRSPKFVGEMKLYVGNIAFTCTEQDMQEAFSEAGDVGEVSLVRDDEGRNRGFGFITMRTKEGGEKAIELLDGASVNGRNIAVR 221
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A7S1Z4Z8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4Z8_TRICV)

HSP 1 Score: 92.4 bits (228), Expect = 1.260e-17
Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 3 
Query:  270 AEDGRETIANQDPELHGEVGDTFVKCGKCQACYAIDVEVLG---RGRVIECSVCGNTWFQSVERTLTLTQNFLMKNWSEERTRDARTKAAAAPALGF----DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK 770
            A   R+ +  +D  + G    T+V+CG+C A YAI  + LG   +GR +ECSVCG++W+QS +R   L+  F  + + +      ++   A     F      +V N+ +   E+ +   F   G V   SL  DE   S+GF  V M +E DG+KA+  L+G  + GRNI V+
Sbjct:   62 ASGARQKMYGKDLAMPG----TYVQCGRCHAAYAIQEDDLGDRGKGRRVECSVCGHSWYQSRDRLFGLSTGFEYRPFPQSDVVRVKSNLEAGRPADFRGVAKFYVGNLDYGTDEESVRVHFETAGTVGDVSLITDEDGRSRGFAFVTMMTEEDGEKAV-QLDGTELAGRNISVR 230
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A6V2PYU0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PYU0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.300e-16
Identity = 52/154 (33.77%), Postives = 88/154 (57.14%), Query Frame = 3 
Query:  330 DTFVKCGKCQACYAIDVEVLG---RGRVIECSVCGNTWFQSVERTLTLTQNF-LMKNWSEERTRDARTKAAAA-PALGFD--LFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK 770
            +T+ +CG+C   +A+  E LG   +GR +ECSVCG++W+Q+ ++   + + F L++    + +R  R  AA   P    D  L+V N+ F V+E+DL   F    +V   ++  D+   SKGF  V M ++  G+KA+  L+G  + GRN+ V+
Sbjct:   64 ETYARCGRCSTSFALTSEDLGDRGKGRRVECSVCGHSWYQARDKLFDIREGFELVELPQSDVSRIERNIAADRDPRFTGDSKLYVGNLDFKVTEEDLFEEFSKVDEVGDVTIITDDSGRSKGFAFVTMLTKEGGEKALEKLDGEEVFGRNLNVR 217
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A523K038_9GAMM (RNA-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523K038_9GAMM)

HSP 1 Score: 72.4 bits (176), Expect = 4.110e-12
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 3 
Query:  552 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 776
            +++V N+P+SVSE DL A F +FG+VSSA++  D +  +SKGFG V+M S+++ ++AI ALN     GRNI V  A
Sbjct:    2 NIYVGNLPYSVSEDDLRAAFADFGEVSSANVIMDRMSGQSKGFGFVEMPSDSEAEEAINALNDSAFNGRNIKVNQA 77
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: I4AKB7_BERLS (RRM domain-containing RNA-binding protein n=3 Tax=Cytophagales TaxID=768507 RepID=I4AKB7_BERLS)

HSP 1 Score: 72.4 bits (176), Expect = 4.700e-12
Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 3 
Query:  552 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKD-ELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAAV 779
            +L+V+N+P+S+SE++L A+F   G V+S  +  D E   S+GFG V+MESE DG+ AI  LNG+ ++GR I VK A+
Sbjct:    2 NLYVSNLPYSISEEELEAVFSELGVVTSTKIITDRETRRSRGFGFVEMESEEDGEAAIEELNGVELKGREIQVKKAI 78
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A2D5XWZ7_9ARCH (RNA-binding protein n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D5XWZ7_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 5.170e-11
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 3 
Query:  555 LFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAAVSNSGS 794
            +FV N+PFSV  +DL  IF   G+VS A++  D     S+GFG V  E++ADG KAI A+NG  ++GR + V  A    GS
Sbjct:    1 MFVGNLPFSVKSEDLKQIFSEHGEVSEAAVITDRFSGRSRGFGFVTFENDADGDKAIEAMNGKDVEGREMTVNEARPQGGS 81
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A0F2NE14_9DELT (RNA-binding protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A0F2NE14_9DELT)

HSP 1 Score: 68.9 bits (167), Expect = 8.430e-11
Identity = 35/75 (46.67%), Postives = 54/75 (72.00%), Query Frame = 3 
Query:  555 LFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 776
            L+V N+ + ++E+DL  +F  FGQV SA++ KD+   +SKGFG V+M+++A+ Q AI ALNG  ++GR I+V  A
Sbjct:    3 LYVGNLSYEITEQDLQQMFEQFGQVGSANIIKDKYSGQSKGFGFVEMDAQAEAQAAIEALNGKEMKGRAIIVNEA 77
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A533U5R3_CHLSQ (RNA-binding protein n=1 Tax=Chlorobium sp. TaxID=1095 RepID=A0A533U5R3_CHLSQ)

HSP 1 Score: 68.2 bits (165), Expect = 1.200e-10
Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 3 
Query:  552 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKDELD-ESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 776
            ++++ N+P+SV+E DL   F  FGQV+SA++  D+    SKGFG V M S+++G++AIGA+N    +GR I V  A
Sbjct:    2 NIYIGNLPYSVTEDDLREAFSQFGQVNSANIITDKFSGRSKGFGFVDMPSDSEGREAIGAMNDKDFKGRTIKVNEA 77
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BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Match: A0A6H9LCB5_9BACT (RNA-binding protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A6H9LCB5_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 2.250e-10
Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 3 
Query:  552 DLFVANIPFSVSEKDLMAIFGNFGQVSSASLAKD-ELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVKAA 776
            +L+V N+ +  SE+DL A+F  FG++ S ++ KD +  +SKGF  V+M S +D  KAI ALNG  ++GRN+ +  A
Sbjct:    2 NLYVGNLSYETSEEDLKALFDEFGEIESVNVIKDRQTGQSKGFAFVEMPSNSDADKAIKALNGQDLKGRNLKINQA 77
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6528.14115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2C5_9PHAE1.650e-7053.41RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7R9WVI4_9STRA1.340e-1932.62Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1Z4Z8_TRICV1.260e-1733.33Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6V2PYU0_9STRA5.300e-1633.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A523K038_9GAMM4.110e-1248.68RNA-binding protein n=1 Tax=Gammaproteobacteria ba... [more]
I4AKB7_BERLS4.700e-1248.05RRM domain-containing RNA-binding protein n=3 Tax=... [more]
A0A2D5XWZ7_9ARCH5.170e-1145.68RNA-binding protein n=1 Tax=Candidatus Pacearchaeo... [more]
A0A0F2NE14_9DELT8.430e-1146.67RNA-binding protein (Fragment) n=2 Tax=Bacteria Ta... [more]
A0A533U5R3_CHLSQ1.200e-1044.74RNA-binding protein n=1 Tax=Chlorobium sp. TaxID=1... [more]
A0A6H9LCB5_9BACT2.250e-1043.42RNA-binding protein n=1 Tax=Calditrichaeota bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6528contigH-elongata_contig6528:860..6148 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score239.6
Seed ortholog evalue1.8e-60
Seed eggNOG ortholog2880.D7G7E1
KEGG rclassRC00331,RC00418,RC02600
KEGG koko:K17989
KEGG ReactionR00220,R00590,R00996
KEGG Pathwayko00260,ko00270,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map00290,map01100,map01110,map01130,map01200,map01230
KEGG ModuleM00570
EggNOG free text desc.RNA binding
EggNOG OGsKOG0145@1,KOG0145@2759
EC4.3.1.17,4.3.1.19
COG Functional cat.DU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-04_003170.1
Exons7
Model size1522
Cds size843
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931039.886396-UTR-H-elongata_contig6528:859..8791622931039.886396-UTR-H-elongata_contig6528:859..879Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6528 860..879 +
1691679673.1155221-UTR-H-elongata_contig6528:859..8791691679673.1155221-UTR-H-elongata_contig6528:859..879Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6528 860..879 +
1622931040.015824-UTR-H-elongata_contig6528:5489..61481622931040.015824-UTR-H-elongata_contig6528:5489..6148Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6528 5490..6148 +
1691679673.2072074-UTR-H-elongata_contig6528:5489..61481691679673.2072074-UTR-H-elongata_contig6528:5489..6148Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6528 5490..6148 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931039.9076915-CDS-H-elongata_contig6528:879..10571622931039.9076915-CDS-H-elongata_contig6528:879..1057Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 880..1057 +
1691679673.13117-CDS-H-elongata_contig6528:879..10571691679673.13117-CDS-H-elongata_contig6528:879..1057Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 880..1057 +
1622931039.9256632-CDS-H-elongata_contig6528:2984..31691622931039.9256632-CDS-H-elongata_contig6528:2984..3169Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 2985..3169 +
1691679673.1405158-CDS-H-elongata_contig6528:2984..31691691679673.1405158-CDS-H-elongata_contig6528:2984..3169Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 2985..3169 +
1622931039.944993-CDS-H-elongata_contig6528:3651..37531622931039.944993-CDS-H-elongata_contig6528:3651..3753Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 3652..3753 +
1691679673.1500103-CDS-H-elongata_contig6528:3651..37531691679673.1500103-CDS-H-elongata_contig6528:3651..3753Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 3652..3753 +
1622931039.9610019-CDS-H-elongata_contig6528:4187..42951622931039.9610019-CDS-H-elongata_contig6528:4187..4295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 4188..4295 +
1691679673.1596866-CDS-H-elongata_contig6528:4187..42951691679673.1596866-CDS-H-elongata_contig6528:4187..4295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 4188..4295 +
1622931039.973227-CDS-H-elongata_contig6528:4609..47051622931039.973227-CDS-H-elongata_contig6528:4609..4705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 4610..4705 +
1691679673.1732428-CDS-H-elongata_contig6528:4609..47051691679673.1732428-CDS-H-elongata_contig6528:4609..4705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 4610..4705 +
1622931039.9868338-CDS-H-elongata_contig6528:4992..50541622931039.9868338-CDS-H-elongata_contig6528:4992..5054Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 4993..5054 +
1691679673.183954-CDS-H-elongata_contig6528:4992..50541691679673.183954-CDS-H-elongata_contig6528:4992..5054Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 4993..5054 +
1622931040.0018005-CDS-H-elongata_contig6528:5377..54891622931040.0018005-CDS-H-elongata_contig6528:5377..5489Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 5378..5489 +
1691679673.1956215-CDS-H-elongata_contig6528:5377..54891691679673.1956215-CDS-H-elongata_contig6528:5377..5489Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6528 5378..5489 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6528.14115.1prot_H-elongata_contig6528.14115.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6528 880..5489 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6528.14115.1

>prot_H-elongata_contig6528.14115.1 ID=prot_H-elongata_contig6528.14115.1|Name=mRNA_H-elongata_contig6528.14115.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp
MAPTGYLTTCIVLVAIATADLLTGVSAFAGVLRSGLRVPHDCSSSSAVTA
ARSSARRASVGISARRRRLPSFTLSMAPPDTMEAEDGRETIANQDPELHG
EVGDTFVKCGKCQACYAIDVEVLGRGRVIECSVCGNTWFQSVERTLTLTQ
NFLMKNWSEERTRDARTKAAAAPALGFDLFVANIPFSVSEKDLMAIFGNF
GQVSSASLAKDELDESKGFGVVKMESEADGQKAIGALNGMGIQGRNILVK
AAVSNSGSRGGSRGGRGGGGGGRYGGDREY*
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mRNA from alignment at H-elongata_contig6528:860..6148+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6528.14115.1 ID=mRNA_H-elongata_contig6528.14115.1|Name=mRNA_H-elongata_contig6528.14115.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5289bp|location=Sequence derived from alignment at H-elongata_contig6528:860..6148+ (Himanthalia elongata Himel1 dioecious)
GCCCTCTAAGCTTACATCCGATGGCACCAACAGGGTACTTAACCACGTGC
ATCGTCCTGGTGGCGATCGCGACAGCAGATTTATTAACTGGTGTGTCAGC
GTTTGCTGGAGTCCTGCGATCAGGACTGCGAGTGCCGCATGATTGCTCAT
CGTCGTCAGCAGTTACAGCCGCGCGCTCCTCGGCGAGACGCGCATCAGGT
AACCACAAAGCTCCGCGGGTGCCATTTCTATCCAAACGGGACAGTGCTAA
TATTTTCAGGGATCAATCATGAATGTGCGCGCCGCTAATGGCTTTCCTCT
TACGCAGCAACCCTTCCTGCAACTTCGCTTTCAGCAGCAGTCGACTGTAT
AGCTACAACGGTTCTGAACAGTCTGTTCATGCCTTCAGCGCTCGTGTGCG
GGTAATGCATACCCTGTTTGTGTGCCGGGTTCGGGCGGCCGAGGCTATTA
ACTAAGTATCATGACCATGCGAATAGCCCCCATTGCGTATTATGTACCTC
TTCAATAAGATTATTTCAGAATTAATACAGCTACAGCAATATCTAATGCA
GCAACCACAACGGAGACATGTTTTTTACGGCTGTCGCGTCTTCATGTGGA
TCTTGATGGCATGAACAACCTACACTTACTACTATATTTTGTCTGCACCA
AACACGACTAGGCGTTTGCTCTATCGAGATGTGGGAATAGCGGAGGTGTC
GGCGCCTTGTGTTTGAGGCATACGTCGTGAGACTTACGATGTACTCCATC
ATGCGCATGATTCTACTCGGCTTACCGATACCGTATAGTACGCCTCCGAC
ACTGTCTGTCCTGTATCGCACATGTCCACTGTACCAGTATGTAGTGGGTG
TGGGAAAAGAAAGAACCACGATGATTAGTCCAAGGGGTTACCTGAATAGG
CTGCACCCGTTACTCAAGCTACCTTGAGGACTGCTAACTCAGTGCCAATG
GACTTTCGATGGTGTGGTCATCACATATAGCAAAGTATGGTTCAACTGGA
TTTGGTTGCCTCCTGCTTGTGGTCAGCCTAACAGGGAAAATGAATTTTCC
CTGTCCCCGTTCGCGCCTGAGAGTTTGGTCTCACGAGACGGGTTCGGTCA
TCCCGTCCCGCGTCAGTTTGCTCATTCTCCCAACTCAGGCTCAATCTTGT
GCATACTCTCGAGATCCTCTCAATATTTTAGTTTTCCGCGCCAGCGTCCA
TCTCTGCCGTCAACCGCCAATCCCGATTTCATCAGGCCACGCATTTGCAT
AACGGTGGCTTTTACGAAGGGTCCGCCGACACTAAGCCAGCAGTCCTCAA
GGTAGCTTGAGTAAGGGGTGCAACCTATTCAGGTAGCCCCATGAACCAAT
TATTGGGCGCCTCTCTTTTCCCACACCTGCTATAGGTACAGTGGACATGT
ATGATACAATCATACAGCATCGGAGTGAACGCCATCGAAACGTAAGTACG
TGGCCTAATGAACTCCGGATTGACCCGATGGCGGTTGACGGTAGAGATGG
ACGCCGTCGCGGAAAGCAAGAGGATCGAGAGGATCTCGGGAACACACACC
AGATTCAGCCTGGGTTGAGAGAATGAGCAGGCTGACGCGGGACGGGGCTG
CCGAACCCGCCTCACGAGACCAAATTCTCAAATGCGAACGGGGACCATAA
AGGGGGGGCATTTGCAAACCGGCGTGGCGCCCCCGTACGTGTCATACCGG
TTTGTGTGGTCTAATGCAAATTGATAAAAAAGGACAGGGAAAATTAATTT
TCCTCTTCAGCTGACCATAAGCACGAGGCAGCCAATGATCCATACCCCGC
TACATGTGATCACCACACATATGTGATGACCACACAGATCTAGTGATATT
TTTTCCTTGTGTTTTAAATCCTACACAAGCGGCAGCAAGATGGAGATGAA
ACGCCTCTTACACGGCCTCGCCCAGAGGCCGATGAGCGGTACAAATCAAC
CCAAGCACCGCTTGTTTGAGCTGCCGGCCCACCTTGAGAGGGGGCCTGTG
CCTCTCGTGTCGTGGTACCTACGATATACTGTACGGCATGCACTGTTTGC
GTTGGTCAACGTCAATTTTCGCCCATCTTTACGTCGTGTTGACGCCTCGC
CCTCAACTGTCGGATATTTCTTCAGTGGGCATTTCCGCCCGCAGGCGACG
GCTACCGTCCTTCACCCTTTCGATGGCGCCGCCAGACACCATGGAGGCAG
AGGACGGACGAGAGACAATCGCGAACCAGGACCCGGAGCTGCACGGGGAG
GTCGGGGACACCTTTGTCAAGTGCGGAAAGTGCCAAGCGTGCTACGCCAT
CGACGTAGAGGTGTGGAACCGTGCGCACGGCGTGTTCGGGCTCGCGACGG
CACCTATCTTGCATCATTCCTCCTGCTGCTGCTGCTCCTGCTGCTTGCTA
AGGATGAGGTAGATTAGGCTCTATACCAGAGTACCGTAGGAACAACAGTC
TCCCCTCCCTATATAATTTTCTCGATAACTAAGCAGGCAGCGAGGCCACA
CGCCCCGGGTTGGAAGCGCCTCCCTACGATCCTTCCAACGGCGTAGCTTG
CTGTTGGTGTGCTTCCTTTGTTGGCGATAAGATGGGAGGGGTTAGAATCC
TCATCCCTTGTGTATATTTTAAACCACCACCACCTGCGGCACTATGCGCG
ATCTTGAGCATTTGTGATTGAGCACCTTCCGTTCTAGAGTCGTGGCACGT
GCTGTGCTGTAGCTTCAGTTCGAAGCGCTAAGAGGAGACGTATGCCGTCC
TGACGCGTGCTCTTTTACGTCTTTGGACGCTTCCGACTGCAGGTCCTCGG
GAGGGGTCGGGTAATCGAGTGCTCCGTGTGTGGGAACACGTGGTTCCAGT
CTGTCGAGCGCACGCTTACTCTCACGCAGAACTTCTTGATGAAGGTGAAG
GCTTGGTTGGTTCTAGCGGTAGTCCGCGAAGATAGTCGGTGCTGTAGCTG
TTCTTCCTTTCCGGAGGGACGTTGACGGAGACAGAGGCGAGACAACGAGC
TGTGCATGTTGCCTGTTCCATTGCCGCCTCCACCCTATTTACGGGTGAGG
GAGAAGGATATCATCGTAGCGCCGAGGCGCAGGAAAAAATACGAGCGCGG
CTTGCGGACACGTATGTTTCGTATATATTCACCCCGCGAATGGCTTCCAC
GTATTGGATGCACAGAGGCTCCACGTGCCCTCCAACAAACGCACTCATCG
CATCGCTCTTCGTGTTAGTTCGCGTACGACCGCTTGAGCACTTTCCCTCG
CAAAAAAAAACTTGGCTCACTCTTCTTCCTTCCCTCTGTTGTTGTTTCTC
CTCCTCTCTTCCCTCTCTCTACAATCAGAACTGGTCTGAAGAACGGACGA
GAGACGCCCGGACGAAGGCCGCGGCGGCCCCTGCACTCGGATTTGACCTT
TTTGTCGCCAACATCCCGTTCTCGGTCAGCGAAAAGGTAAGGGAGCGTGA
GACTTTTGTGGGTCGGCGTATAATAGTAGAGAGAGGTGCCCAAGTTTTTG
AGGCGTTTTACGTTCGGCTAACGAAGAAGCAGTGTACGACCGGGTCTTCG
AACTGGCGTCGATTGCCGCGTAGGTGGGGGAGGGGGAAAGAGGGGATGGC
GAAAATGTATTAGAGTTAGTGTATGGGAGGCGTGTTGTTTTGGACGCCTT
CCTGAAGTGTCAATCTCCTCTTATTTTTCCCATATTTTTATTATCATATT
TATTTTGCTGGGGGGCGGGGGGGGGCTTCTTCTCATTTCTCAATCATCAG
GACCTAATGGCGATCTTTGGCAACTTCGGCCAGGTTTCGAGCGCTTCCCT
CGCGAAGGACGAGTTGGACGAGTCCAAGGGCTTCGGTGTCGTCAAGGTGG
AAAATAAATTCGCAAGTCTCAAGCCTTGTCATTCTGTTGATCGTAGCTTT
TACCTTACTCTCACCTGGCCCTTTTTTTTGTTTTGTTTTAGACGTTTTTG
TGCCGAAGCAAACAAACATTGGGTGGGCTTGCGATGTTCGGGGAGAAGGG
CGGGGGGCTATTGGACATATTCCCTTCTCGCGAGACTGTCAAATCATCCC
ACCCCCTCCCCGAAAAAAGCAGGAGCGCTAAATTGTTTTACACGACATGG
TGGGGGGGGTGCTGATTTTATTTTTTCTGTCAGATGGAATCTGAAGCTGA
TGGGCAGAAGGCGATCGGAGCACTCAACGGCATGGGTATTCAAGGGTGAG
CCTTCTCATCTTCCCTTCCCATAGCATAATGCAAGCGTTTTTACCGTAGT
CGATTTCTCCTTGTTCGGACACGGCAAGAATTAGCTGCTGTAGGATACGA
AGGTGGTCATGTTCCCACATCTCACGATTCACGACGACGATGATGGCCGG
CGTCGTACCGCTATGATCCCGATGGCCTTCCTGCCTGCCCAGCCGCGCGT
CTCACGAATCTCTCTTGTGCCTTACAACAAGCTCGGGTGCTCCGTTCGTT
TACAACATGTTGTCTGTTCGGCCTAATGACGAAAATGTAACACACCCGCG
GCGGCTAACAATGAACAGGAGAAACATCTTGGTAAAGGCCGCCGTCTCTA
ATTCAGGCTCCAGGGGAGGTAGCCGAGGAGGGCGCGGCGGAGGAGGAGGC
GGTAGATATGGCGGGGACAGGGAGTACTGATGAAAGCACTTGTGCTTCTC
TCTTCGGTGGCAAACTTTAAAAGGTGTTCCGCGGAGCTCAATGGAAGCAG
TCGGCGTCTCTCGGGCGACAAATTATAGAAAGTTAGAGAAAGGGGAAGGA
TGGCGTACTGCGCTATACAGAGTCAAAATAGTCGAGGTCTTGTTTTCTCG
AACATTTTTGCAGCCAACATGAAGCAAGTGCGTGCGAGCCCGTCCGCACG
AACGTCGGCTGACGCATACAGCCGGGGGGGGTGCACCAGACGAGGTGCTC
GTATTTTCCCCTTGCTTTGGAGCTTGCCTGGCTCAATAGTAAATATGTGA
TCGTAAAAGGTTTCAGTCTCGCAAAGGTGGCGGGGGTAAGCGAGCGACGG
TCTGAGTAAACAGCGATCATCGCGAGTGGATGGCATCTCTTGTGTGGCCC
CAGGAGGGTTTCCACCACTCTAAAAAGACCAAAGCGGCTTCAACTGGATA
AACTTTTGTCCGACAGCAGGAAAACTATAGCAGAGTATCAGTATCAGTAT
TCCCTACATTGTCGTTTCCTTTTGTATGGAGATTACGCTTTACGTTTCCT
TTTTGTATTGGAGAGTACCTTGAACGTTTTTCTCTTTCCGGATGGTGTTT
TTTCTACCGTGTGACCACGGGCTGGATTTTGAAATCAGC
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Coding sequence (CDS) from alignment at H-elongata_contig6528:860..6148+

>mRNA_H-elongata_contig6528.14115.1 ID=mRNA_H-elongata_contig6528.14115.1|Name=mRNA_H-elongata_contig6528.14115.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1686bp|location=Sequence derived from alignment at H-elongata_contig6528:860..6148+ (Himanthalia elongata Himel1 dioecious)
ATGGCACCAACAGGGTACTTAACCACGTGCATCGTCCTGGTGGCGATCGC
GACAGCAGATTTATTAACTGGTGTGTCAGCGTTTGCTGGAGTCCTGCGAT
CAGGACTGCGAGTGCCGCATGATTGCTCATCGTCGTCAGCAGTTACAGCC
GCGCGCTCCTCGGCGAGACGCGCATCAGATGGCACCAACAGGGTACTTAA
CCACGTGCATCGTCCTGGTGGCGATCGCGACAGCAGATTTATTAACTGGT
GTGTCAGCGTTTGCTGGAGTCCTGCGATCAGGACTGCGAGTGCCGCATGA
TTGCTCATCGTCGTCAGCAGTTACAGCCGCGCGCTCCTCGGCGAGACGCG
CATCAGTGGGCATTTCCGCCCGCAGGCGACGGCTACCGTCCTTCACCCTT
TCGATGGCGCCGCCAGACACCATGGAGGCAGAGGACGGACGAGAGACAAT
CGCGAACCAGGACCCGGAGCTGCACGGGGAGGTCGGGGACACCTTTGTCA
AGTGCGGAAAGTGCCAAGCGTGCTACGCCATCGACGTAGAGTGGGCATTT
CCGCCCGCAGGCGACGGCTACCGTCCTTCACCCTTTCGATGGCGCCGCCA
GACACCATGGAGGCAGAGGACGGACGAGAGACAATCGCGAACCAGGACCC
GGAGCTGCACGGGGAGGTCGGGGACACCTTTGTCAAGTGCGGAAAGTGCC
AAGCGTGCTACGCCATCGACGTAGAGGTCCTCGGGAGGGGTCGGGTAATC
GAGTGCTCCGTGTGTGGGAACACGTGGTTCCAGTCTGTCGAGCGCACGCT
TACTCTCACGCAGAACTTCTTGATGAAGGTCCTCGGGAGGGGTCGGGTAA
TCGAGTGCTCCGTGTGTGGGAACACGTGGTTCCAGTCTGTCGAGCGCACG
CTTACTCTCACGCAGAACTTCTTGATGAAGAACTGGTCTGAAGAACGGAC
GAGAGACGCCCGGACGAAGGCCGCGGCGGCCCCTGCACTCGGATTTGACC
TTTTTGTCGCCAACATCCCGTTCTCGGTCAGCGAAAAGAACTGGTCTGAA
GAACGGACGAGAGACGCCCGGACGAAGGCCGCGGCGGCCCCTGCACTCGG
ATTTGACCTTTTTGTCGCCAACATCCCGTTCTCGGTCAGCGAAAAGGACC
TAATGGCGATCTTTGGCAACTTCGGCCAGGTTTCGAGCGCTTCCCTCGCG
AAGGACGAGTTGGACGAGTCCAAGGGCTTCGGTGTCGTCAAGGACCTAAT
GGCGATCTTTGGCAACTTCGGCCAGGTTTCGAGCGCTTCCCTCGCGAAGG
ACGAGTTGGACGAGTCCAAGGGCTTCGGTGTCGTCAAGATGGAATCTGAA
GCTGATGGGCAGAAGGCGATCGGAGCACTCAACGGCATGGGTATTCAAGG
ATGGAATCTGAAGCTGATGGGCAGAAGGCGATCGGAGCACTCAACGGCAT
GGGTATTCAAGGGAGAAACATCTTGGTAAAGGCCGCCGTCTCTAATTCAG
GCTCCAGGGGAGGTAGCCGAGGAGGGCGCGGCGGAGGAGGAGGCGGTAGA
TATGGCGGGGACAGGGAGTACTGAGAGAAACATCTTGGTAAAGGCCGCCG
TCTCTAATTCAGGCTCCAGGGGAGGTAGCCGAGGAGGGCGCGGCGGAGGA
GGAGGCGGTAGATATGGCGGGGACAGGGAGTACTGA
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