prot_H-elongata_contig11825.1407.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11825.1407.1
Unique Nameprot_H-elongata_contig11825.1407.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length208
Homology
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.740e-80
Identity = 132/211 (62.56%), Postives = 154/211 (72.99%), Query Frame = 0
Query:    2 GAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHMIDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCIKAHAGALTTMI----VMRYALATGSADGNIKLWTSSLEMARCIDVKALG 208
            GA+PRVCVWCAET   +       R+                 P  + LVVS+G+D AHSVAVFHW+SR+TLFTAPSGPEPVL  H++ EN+FVSCGVDH+R WTR  G FEV++GIFGRKGA QPMLCC SLGD+ +++VLTGSTSGH+YVWEGRNCT CIKAH GA+  M          LATGSADG ++LWTSSLEMA CIDVKALG
Sbjct:  136 GARPRVCVWCAETSPLVK-----ERD-----------------PRHYKLVVSVGKDSAHSVAVFHWQSRTTLFTAPSGPEPVLGCHVVHENLFVSCGVDHLRLWTRVGGRFEVEKGIFGRKGARQPMLCCISLGDEGSEMVLTGSTSGHLYVWEGRNCTRCIKAHTGAIMAMARGDGTEHQGLATGSADGKVQLWTSSLEMAVCIDVKALG 324          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: A0A835ZKM6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.700e-37
Identity = 86/215 (40.00%), Postives = 118/215 (54.88%), Query Frame = 0
Query:    1 MGAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAH--SVAVFHWRSRSTLFTAP---SGPEPVLDSHMIDENMFVSCGVDHVRFWTRTD-GP-FEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCIKAHAGALTTMIV-MRYALATGSADGNIKLWTSSLEMARCIDVKAL 207
            +G +P++ VWCAETC  L  FRG H  GI+ + FSPD            L +S+G +P    S+AV HW S++T+FT+    +G   +  +     + F +CGVDHV  W R+  GP FE   G+FG  G  Q  LCC  LG D   +  TG  SGH+ +WEGRNCT C+K HA A+T +      A  TG+ADG         ++A C D ++L
Sbjct:  437 LGRRPKLAVWCAETCTLLGSFRGVHGSGIALVRFSPDAA----------LTLSVGMEPGPEVSLAVRHWPSQTTIFTSTCSGAGAPTIAVTFAGGGDRFATCGVDHVTLWDRSSTGPGFERSTGVFGPTGLQQTQLCC--LGFDGGAVA-TGGGSGHVSLWEGRNCTKCVKGHAAAVTVIAAGAGGAFVTGAADG---------KLAACFDTRSL 629          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: A0A7S1CBA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA4_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.210e-33
Identity = 69/214 (32.24%), Postives = 110/214 (51.40%), Query Frame = 0
Query:    1 MGAKPRVCVWCAETCEALSIFRGFHREGISNICFSP-DGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHMIDENMFVSCGVDHVRFW---TRTDGPFEVDQGIFGRKG--ALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCIKAHAGALTTMIVMRYALATGSADGNIKLWTSSLEMARCIDVKALG 208
            MG KPRV VW  +T E +S+  GFHR  +  + F   DG+          L+ ++G+D  H++ V+ W     +++  S    VL    +D N  V+ GV H+ FW   +RT       +G++GR     +QP++  + + D    ++++G+ SGH+Y W+GRNC   +KAH   +  M      L TG  DG +++WT SLE     D+   G
Sbjct:  186 MGRKPRVVVWRTDTMETVSVIEGFHRRAVCAVAFDKKDGR----------LLATVGQDDDHTLFVYDWEKERKIYSEKSDKNKVLAITWLDNNTLVTAGVKHILFWDLKSRTK-----KKGLWGRAKNVKIQPLMSLAPIND--GAMLVSGTASGHIYAWDGRNCVRAVKAHDANVAAMWSCNAGLVTGGKDGKVRIWTHSLEPKNVFDIATFG 382          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: A0A7S3M6P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6P9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.220e-32
Identity = 67/206 (32.52%), Postives = 110/206 (53.40%), Query Frame = 0
Query:    2 GAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHMIDENMFVSCGVDHVRFWTRTD--GPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCIKAHAGALTTMIVMRY-------ALATGSADGNIKLWTSSLEM 198
            GA+P V VW  +T   LS  +GFHR G++ + FSPD +           +V++G D  H +AV+ WR++  L+++ +  +PV D   +  ++  SCG  H+ FW  ++  G F+  +G FG     + + C   +G    K V TGS +G +Y+WEGRN  + IK H GA+    V+ +        L T  ++G + +W S +E+
Sbjct:   27 GARPAVHVWDVDTRTTLSTLQGFHRNGVAQLDFSPDKEK----------LVTLGMDSYHCLAVYRWRTQERLWSSRTTVDPVHDVRFLSNDIIASCGHVHITFWRESNNSGVFKRYRGQFGTAVKPETLWCVGVVG----KTVFTGSETGMIYIWEGRNLINSIKGHTGAIYACHVIDHKDEEKENGLVTACSEGKVLVWNSKMEL 218          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.860e-32
Identity = 76/217 (35.02%), Postives = 114/217 (52.53%), Query Frame = 0
Query:    2 GAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVL---------DSHMIDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEG-RNCTSCIKAHAGALTTMIVMRYALATGSADGNIKLWTSSLEMARCIDVKALG 208
            G  P++ +W A T + +   RG H  GI  + FSP+             +VS+G+DP H+VA++ W +R+ +F+A S    VL         ++       FV+CG DH+ FW + D   +  +G+FG+ GA Q ML  +    +N   +++GS SGH+YVW+G RN    IK H  A+T +      L +G ADG I+LW+  LE     DV  LG
Sbjct:  375 GHPPKIHIWDASTMKIIVTLRGAHAGGIGCLAFSPEQGG--------RWLVSVGQDPEHTVALYDWEARTLVFSAKSTRSRVLSCIFRWPAKETSAGAPPTFVTCGEDHMSFWNQDDNRRQ-KKGVFGKIGAPQSMLSLACHPKNNR--IISGSLSGHLYVWDGNRNLQRTIKGHDSAVTALYFHSTGLLSGGADGKIRLWSLDLEQGAIFDVAGLG 580          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: UPI0009E5D2B7 (echinoderm microtubule-associated protein-like 6 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5D2B7)

HSP 1 Score: 125 bits (314), Expect = 1.360e-29
Identity = 66/207 (31.88%), Postives = 105/207 (50.72%), Query Frame = 0
Query:    1 MGAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHM--IDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCI-KAHAGALTTMIVMRYALATGSADGNIKLWTSSLEMARCIDV 204
            +G  P +CVW  + C+ +SI +  H+ G++ + F+  G           L+VS+G +  H +AV+ WR    L T     + + D       EN+ VSCGV H++FWT         +G+FG+ G +Q  LC +   +D   +  +G+ SG +Y W+G N +  I  AH GA+ TM       ATGS DG + LW +  +    +D+
Sbjct:   81 VGKDPYICVWDTKACQTVSILKDTHQRGVTCLAFNNTG----------TLLVSVGLEDYHLIAVWDWRKGRVLATVRGHTDRIFDIQFNPYQENVLVSCGVKHIKFWTLRGNALNPKKGVFGKAGEIQTNLCLAFGPND---VTYSGTLSGEIYKWKGHNLSGTIPNAHTGAIFTMHGNNDGYATGSKDGTVILWDNGFKPITKLDM 274          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: A0A2B4RJM9_STYPI (Echinoderm microtubule-associated protein-like 6 n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RJM9_STYPI)

HSP 1 Score: 124 bits (311), Expect = 3.370e-29
Identity = 65/200 (32.50%), Postives = 105/200 (52.50%), Query Frame = 0
Query:    1 MGAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHM--IDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCI-KAHAGALTTMIVMRYALATGSADGNIKLWTSSLE 197
            +G  P VCVW ++TC+ +SI +  H+ G++ + F+  G           L+VS+G +  H ++V+ WR    L +     + + D       EN+ VSCGV H++FWT         +G+FG+ G +Q  LC +   +D   +  +G+ SG +Y W+G N +  I  AH GA+ TM       ATGS DG + LW ++ +
Sbjct:   81 VGKDPYVCVWDSKTCQTVSILKDAHQRGVTCLAFNNTG----------TLLVSVGLEDYHLISVWDWRKGRALASVRGHTDRIFDIQFNPYQENLLVSCGVKHIKFWTLCGNALNPKKGVFGKAGEIQTNLCLAFGPND---VTYSGTLSGEIYKWKGHNLSGTIPNAHNGAIFTMHGNSDGYATGSKDGTVILWDNNFK 267          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: UPI001E1D42AF (LOW QUALITY PROTEIN: echinoderm microtubule-associated protein-like 6 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D42AF)

HSP 1 Score: 120 bits (300), Expect = 1.010e-27
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    2 GAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHM--IDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCIKA-HAGALTTMIVMRYALATGSADGNIKLW 192
            G  P +C+W + +    SI +G H  G+  + F  DG          N +VS+G DP  ++ V+ W+    + T     + V D       +N+ VSCGV H++FW+         +GIFG++G +Q +LC S    D   I  +G+  G +Y+W G      I+A H GA+ +M +     +TGS DG  KLW
Sbjct:   82 GKSPYICIWDSISLNTCSILKGGHTHGVGAVSFDKDG----------NRLVSVGIDPQATICVWDWKKGKVIATVRGHTDRVFDVKFNPYQDNVIVSCGVKHIKFWSLCGNALSAKKGIFGKEGEIQTILCVSFGPSD---ITYSGTLGGDVYIWRGNKLDRVIQAAHKGAIYSMDMSEEGYSTGSKDGTAKLW 262          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: B3SCP1_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3SCP1_TRIAD)

HSP 1 Score: 115 bits (288), Expect = 4.060e-26
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 0
Query:    1 MGAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHM--IDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGHMYVWEGRNCTSCIK-AHAGALTTMIVMRYALATGSADGNIKLWTSSLE 197
            +G  P +CVW   T +A+SI +  ++ GI+ + F+ +G          +L+VS+G + +H +AV+ W     L + P   E V D        N  VSCGV H+ FW+         +GIFGR G +Q +LC +   D    I+ +G+ SG +Y W         + AH  A+ T+        TGS DG ++LW +  +
Sbjct:   81 VGNSPYICVWDTGTTQAVSILKDSNKRGIAGLAFNGNG----------SLLVSVGLEDSHQIAVWDWAKGRILASVPGHTERVFDVQFNPFVNNQLVSCGVKHINFWSLCGNALMAKKGIFGRAGEIQTLLCLAFAPDS---IIYSGTLSGDIYKWRNHELIHNYQNAHRSAIFTIFQCNDGYTTGSRDGTVRLWDTEFK 267          
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Match: A0A7S2W8N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W8N2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.560e-25
Identity = 65/208 (31.25%), Postives = 96/208 (46.15%), Query Frame = 0
Query:    6 RVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNLVVSIGEDPAHSVAVFH-----WRSRSTLFTAPSGPEPVLDSHMIDENMFVSCGVDHVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKI----VLTGSTSGHMYVWEGRNCTSCIKAHAGALTTMIVMRYALATGSADGNIKLWTSSLEMARCIDV 204
            RV +W A T   +      H    S + FS DG          + +VS+GED  HSVAV+      W     L  A  G E ++           +CGV+H+ FW          +G+FGRKG +QP+LC   +   N       V+TG+ +GH+Y+W G      IK H  ++  +   ++ + TGS DG +KLW + L   R  D+
Sbjct:  132 RVHIWNALTGAQIIKLAATHVSAASQLAFSGDG----------SRLVSVGEDENHSVAVWRSDSGTWVDAQLLALAMGGQEKIMGVIFHGPTHLATCGVNHITFWNLDGQVLTPTKGLFGRKGKVQPLLCAGVMSYANVATSVSKVVTGTVTGHLYIWAGAEVIKSIKGHERSVNAIHSCQFGIITGSKDGVVKLWDTKLSPIRTFDM 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11825.1407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE32_ECTSI1.740e-8062.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZKM6_9STRA1.700e-3740.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S1CBA4_9STRA4.210e-3332.24Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3M6P9_9STRA2.220e-3232.52Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2R5G5S9_9STRA2.860e-3235.02Echinoderm microtubule-associated protein-like 1 n... [more]
UPI0009E5D2B71.360e-2931.88echinoderm microtubule-associated protein-like 6 n... [more]
A0A2B4RJM9_STYPI3.370e-2932.50Echinoderm microtubule-associated protein-like 6 n... [more]
UPI001E1D42AF1.010e-2731.96LOW QUALITY PROTEIN: echinoderm microtubule-associ... [more]
B3SCP1_TRIAD4.060e-2631.00Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
A0A7S2W8N2_9STRA1.560e-2531.25Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 118..155
e-value: 110.0
score: 4.1
coord: 156..193
e-value: 0.08
score: 22.1
coord: 14..106
e-value: 0.97
score: 17.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 158..192
e-value: 0.096
score: 13.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 163..192
score: 8.67
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..205
e-value: 3.7E-41
score: 143.3
NoneNo IPR availablePANTHERPTHR13720:SF16ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 5coord: 7..201
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 7..201
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11825contigH-elongata_contig11825:5054..7053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11825.1407.1mRNA_H-elongata_contig11825.1407.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11825 5054..7071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11825.1407.1 ID=prot_H-elongata_contig11825.1407.1|Name=mRNA_H-elongata_contig11825.1407.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp
MGAKPRVCVWCAETCEALSIFRGFHREGISNICFSPDGQASGTSPSFFNL
VVSIGEDPAHSVAVFHWRSRSTLFTAPSGPEPVLDSHMIDENMFVSCGVD
HVRFWTRTDGPFEVDQGIFGRKGALQPMLCCSSLGDDNAKIVLTGSTSGH
MYVWEGRNCTSCIKAHAGALTTMIVMRYALATGSADGNIKLWTSSLEMAR
CIDVKALG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf