mRNA_H-elongata_contig63951.13981.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig63951.13981.1
Unique NamemRNA_H-elongata_contig63951.13981.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.480e-39
Identity = 88/210 (41.90%), Postives = 119/210 (56.67%), Query Frame = 3
Query:    3 HGDDQQMLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITD--INIFFDDFYHALIVQ--KMTIKDAFDFAVGT-------EAPQKKN--LLPDGGNHQVKIFNDIAAGKFVNETPELPPMLGLPKARGQYFGPKEFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHYAGAR 593
            HG+++ + FE+ +   CG+ +PL V   KNLF  G  + +LV + S  S A G A V+AGVPHVVAV+ EE +TD     F   FY AL+ +    T++ AFD A+ T         PQ  +  LLP GGNH V+IF+ +  G FV+ET E P      +    Y G +E QK V +L DP   CV++ GE G GK+ER +QAC Y   R
Sbjct:   98 HGNNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVQTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGSFTVQQAFDIALNTVNAHPPYARPQGDHFLLLPHGGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMR 307          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.080e-26
Identity = 72/179 (40.22%), Postives = 99/179 (55.31%), Query Frame = 3
Query:    3 HGDDQQMLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITD--INIFFDDFYHALIVQ--KMTIKDAFDFAVGT-------EAPQKKN--LLPDGGNHQVKIFNDIAAGKFVNETPELPPMLGLPKARGQYFGPKEFQKTVNLLQ 500
            HG ++ + FE+ +   CG+ +PL V   KNLF  G  + +LV + S  S A G A V+AGVPHVVAV+ EE +TD     F   FY AL+ +  + T+K AFD A+ T         PQ  +  LLP GGNH V+IF+ +  G+FV+ET E       P AR +   P  F + +  LQ
Sbjct:   41 HGSNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVRTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNAHPPHARPQGDHFLLLPHGGNHDVRIFDTLPEGRFVDETRE-------PPARPRCARPVPFYQGLEELQ 212          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 3.670e-16
Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = 3
Query:   99 GPGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITDINIF-FDDFYHALIVQKMTIKDAFDFAV----GTEAPQKKN---LLPDGGNHQVKIFNDIAAGKFVNETPELPPMLGLPKARGQYFGPK--EFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHYAGAR 593
            G   T   LV L S  S++  +  +EAGV HV+AV+ + ++ D     F   ++A +++  T++ AF        G++ P++ +   LLP  G+H + +F ++  G+FV+ TP  PP      A  QYF  +  + QK V  +   G+ CV+I G++GIGKT+ +++AC Y   R
Sbjct:   75 GAPRTGLQLVFLSSCHSQSVAKCFIEAGVRHVIAVKKDSKVLDHKAAEFAKSFYASLLRGDTVRRAFLLGSACLEGSDQPEEGHKFLLLPPEGDHDIPVFEEVPDGQFVDATPLKPPYRC--DAVTQYFWGRAVDVQKVVKHMVS-GVPCVTITGQKGIGKTQVLLKACAYTRER 246          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: A0A6H5JKN2_9PHAE (CHAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 6.450e-16
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 3
Query:    6 GDDQQMLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITDINI--FFDDFYHALIVQ--KMTIKDAFDFAV 308
            G+D+ + FE+   + CG+ +PL+V + KNLF  G  + +LV + S  S   GRA VEAGVPHVVAV+ E  +TD     F   FY AL+    + T+K AFD A+
Sbjct:   76 GNDKYLAFESGRDWNCGIMEPLEVASLKNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHEANVTDEEALHFSTVFYDALLENGGRYTVKQAFDIAL 180          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: X6NSJ4_RETFI (CHAT domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NSJ4_RETFI)

HSP 1 Score: 83.6 bits (205), Expect = 3.360e-15
Identity = 65/215 (30.23%), Postives = 100/215 (46.51%), Query Frame = 3
Query:    3 HGDDQQMLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITD--INIFFDDFYHALIVQKMTIKDAFD--------FAVGTEAPQKKNLL----PDGGNHQVKIF--NDIAAGKFVNETPELPPMLGLPKARGQYFGPK-EFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHYAGARG 596
            HG  Q ++FEN  P   G    +  D  +         P+LV + S  S   G+  V+AG+ HVVAVE++ E  D     F + FYH+L+     I DAF          A  ++  +KK +L    P G  H+VK+F  + + +G+ V+++  LPP   LP     +     +  + +  L D G++ V + G  GIGK+   V    Y   RG
Sbjct:  423 HGMSQSLIFEN--PKNIGTDHSVSCDVIRRACRDAKHGPELVFVCSNHSEIVGKTFVDAGIKHVVAVETDFETADDAATEFTNHFYHSLL-NGYEIIDAFKQAKNAVVGLAGSSKQDEKKFVLLPLDPSGRLHRVKVFRHDQLVSGQLVDDSLPLPPN-NLPPPISHFINRNVDMARVIEHLLDSGVKIVDLTGGEGIGKSAVAVMTARYLCYRG 633          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: X6P3P9_RETFI (CHAT domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6P3P9_RETFI)

HSP 1 Score: 75.5 bits (184), Expect = 2.030e-12
Identity = 64/226 (28.32%), Postives = 99/226 (43.81%), Query Frame = 3
Query:    3 HGDDQQMLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRA----------------HGRALVEAGVPHVVAVESEEEITD--INIFFDDFYHALIVQKMTIKDAFDFA---------VGTEAPQKKNLLPDGGN---HQVKIFND--IAAGKFVNETPELPPMLGLPKARGQYFGPK-EFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHY 581
            HG  Q ++FEN  P   G    +  D            P+LV+  +  S                   G+A VEAG+ HV+AV++E E+ D   + F + FYH+L+    TI DAF  A         VG +  +K  LLP   N   H VK+F    +  G  ++++  LPP   LP     + G   +  K +  + D G++ V ++G  G+GK+   +    Y
Sbjct:  244 HGMPQSLVFEN--PKNLGFDHSVSCDLIGRACRDAKYGPELVVASACHSEVVGKLFXXXXXXXXXXXGGKAFVEAGIKHVIAVKTEFELNDDAASEFTNHFYHSLLTGN-TILDAFKHAKNAVTGMPGVGKQDEKKFVLLPIDPNDRIHNVKLFRPGGLPKGDLIDDSTPLPPN-NLPPPVSNFMGRNADMVKLIQPIVDNGVKMVGLMGPEGVGKSALAIMTARY 465          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: A0A6A7FYI7_9CRUS (Sh2 domain containing protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FYI7_9CRUS)

HSP 1 Score: 72.4 bits (176), Expect = 2.290e-11
Identity = 54/171 (31.58%), Postives = 83/171 (48.54%), Query Frame = 3
Query:  111 TKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITDIN--IFFDDFYHALIVQKMTIKDAFDFAVGTEAPQKK-----------NLLPDGGNHQVKIFNDIAAGKFVNETPELPPMLGLPKARGQYFGPKEFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHYA 584
            +K   V + +  S   G A   AGVPHVVAV  +  ++D    IFF  FY +L++ + T++  + + VG  A   +            LLP  G+H V IF DI  G + + TP  P M  +P+    + G ++ +      +    R V++ GE GIGKT  ++   HYA
Sbjct:  229 SKLRFVFVSACRSEDAGMAFAAAGVPHVVAVRWDSNVSDSASLIFFKSFYLSLLLGR-TVE--YSYHVGKVAVDNRPNSVYLEGDRFRLLPTDGDHNVPIFKDIENGDWQDVTPPAPNM-SIPQIPEHFVG-RDLETQFVFKRICKHRLVTLTGEPGIGKTTVVIAVAHYA 394          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: X6N8W8_RETFI (CHAT domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N8W8_RETFI)

HSP 1 Score: 71.6 bits (174), Expect = 4.570e-11
Identity = 50/158 (31.65%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  159 GRALVEAGVPHVVAVESEEEITD--INIFFDDFYHALIVQKMTIKDAFDFA---------VGTEAPQKKNLLP---DGGNHQVKIF--NDIAAGKFVNETPELPPMLGLPKARGQYFGPK-EFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHY 581
            G+A VEAG+ HV+AV++E E+ D   + F + FYH L+    TI DAF  A         VG +   K  LLP    G  H+V +F    +  G+ +N++  LPP   LP     + G   +  K +  + + G++ V+++G +G+GK+   +    Y
Sbjct:  593 GKAFVEAGIKHVIAVKTEFELNDDAASEFTNHFYHGLL-NGYTILDAFKQAKNAVNGMAGVGKQDEDKFVLLPVDPSGTLHKVTLFPHGKLVQGELINDSVALPPN-NLPPPIPHFLGRSVDMVKVIQPIVESGVKIVNLMGSQGVGKSALALMTARY 748          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 4.990e-10
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 3
Query:    6 GDDQQMLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEIT----DINIF 239
            G+D+ + FE+   + CG+ +PL+V +  NLF  G  + +LV + S  S   GRA VEAGVPHVVAV+ +  +T    D+ IF
Sbjct:   38 GNDKYLAFESGRDWNCGIMEPLEVASLSNLFQAGGVRTELVFISSCSSEMSGRACVEAGVPHVVAVKHKANVTGGNHDVRIF 119          
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Match: A0A7S1UA55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA55_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.730e-9
Identity = 64/227 (28.19%), Postives = 99/227 (43.61%), Query Frame = 3
Query:    3 HGDDQQMLFENEEPFQCGMAKPLDVDATKNLFG--PGTTKPDLVLLKSRVSRAHGRALVEAGVPHVVAVESEEEITD--INIFFDDFYHALIVQKMTIKDAFDF-------------------AVGTEAPQKKNLL--PDGGNHQVKIF--NDIAAGKFVNETPELPPML---GLPKARGQYFGPKEFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHYAGAR 593
            HG D  +    E+P   G    L   +    FG   G ++P LV + +  S + GRA V+AG+ HVVAV+  + ++D    +F  +FY +L+    T++ AFD                    A G     ++ LL  P G +H   IF    +  G + +ETP  P  L   G  K  G+ +   E  + +  L+     C  + G++G GKT   + A  YA  R
Sbjct:   69 HGADDLLCL--EKPGATGEPHFLTSASLAAYFGGAAGVSRPKLVFVSACSSESAGRAFVDAGIAHVVAVQQGDRLSDEDARLFAGEFYLSLLTGH-TVRQAFDAGRACVDISRTSANPSGAGRAGGAPGEPERFLLLGPPGADHGEVIFPLGALRVGPYADETPPAPLNLCDRGPSKLIGRRW---ELHRLLEKLRSSA--CCIVEGKKGQGKTALAICAADYAARR 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63951.13981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KH01_9PHAE1.480e-3941.90CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
D7FNX8_ECTSI1.080e-2640.22SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D8LEZ2_ECTSI3.670e-1632.57SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JKN2_9PHAE6.450e-1643.81CHAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
X6NSJ4_RETFI3.360e-1530.23CHAT domain-containing protein n=1 Tax=Reticulomyx... [more]
X6P3P9_RETFI2.030e-1228.32CHAT domain-containing protein n=1 Tax=Reticulomyx... [more]
A0A6A7FYI7_9CRUS2.290e-1131.58Sh2 domain containing protein (Fragment) n=1 Tax=H... [more]
X6N8W8_RETFI4.570e-1131.65CHAT domain-containing protein n=1 Tax=Reticulomyx... [more]
D7FNY4_ECTSI4.990e-1042.68SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1UA55_9STRA4.730e-928.19Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63951contigH-elongata_contig63951:1284..3418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.7
Seed ortholog evalue3.6e-28
Seed eggNOG ortholog2880.D7FNY6
EggNOG OGs28NM8@1,2QV6X@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size598
Cds size576
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63951.13981.1prot_H-elongata_contig63951.13981.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig63951 1304..3418 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931025.3471704-UTR-H-elongata_contig63951:1283..13031622931025.3471704-UTR-H-elongata_contig63951:1283..1303Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig63951 1284..1303 +
1691679666.7139523-UTR-H-elongata_contig63951:1283..13031691679666.7139523-UTR-H-elongata_contig63951:1283..1303Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig63951 1284..1303 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931025.3627887-CDS-H-elongata_contig63951:1303..13571622931025.3627887-CDS-H-elongata_contig63951:1303..1357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 1304..1357 +
1691679666.726259-CDS-H-elongata_contig63951:1303..13571691679666.726259-CDS-H-elongata_contig63951:1303..1357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 1304..1357 +
1622931025.3787487-CDS-H-elongata_contig63951:1832..19831622931025.3787487-CDS-H-elongata_contig63951:1832..1983Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 1833..1983 +
1691679666.736357-CDS-H-elongata_contig63951:1832..19831691679666.736357-CDS-H-elongata_contig63951:1832..1983Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 1833..1983 +
1622931025.3905954-CDS-H-elongata_contig63951:2256..23791622931025.3905954-CDS-H-elongata_contig63951:2256..2379Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 2257..2379 +
1691679666.747332-CDS-H-elongata_contig63951:2256..23791691679666.747332-CDS-H-elongata_contig63951:2256..2379Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 2257..2379 +
1622931025.4096458-CDS-H-elongata_contig63951:2664..27951622931025.4096458-CDS-H-elongata_contig63951:2664..2795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 2665..2795 +
1691679666.7566583-CDS-H-elongata_contig63951:2664..27951691679666.7566583-CDS-H-elongata_contig63951:2664..2795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 2665..2795 +
1622931025.428509-CDS-H-elongata_contig63951:3301..34181622931025.428509-CDS-H-elongata_contig63951:3301..3418Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 3302..3418 +
1691679666.7656531-CDS-H-elongata_contig63951:3301..34181691679666.7656531-CDS-H-elongata_contig63951:3301..3418Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63951 3302..3418 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig63951.13981.1

>prot_H-elongata_contig63951.13981.1 ID=prot_H-elongata_contig63951.13981.1|Name=mRNA_H-elongata_contig63951.13981.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
MLFENEEPFQCGMAKPLDVDATKNLFGPGTTKPDLVLLKSRVSRAHGRAL
VEAGVPHVVAVESEEEITDINIFFDDFYHALIVQKMTIKDAFDFAVGTEA
PQKKNLLPDGGNHQVKIFNDIAAGKFVNETPELPPMLGLPKARGQYFGPK
EFQKTVNLLQDPGIRCVSIVGERGIGKTERMVQACHYAGARG
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mRNA from alignment at H-elongata_contig63951:1284..3418+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig63951.13981.1 ID=mRNA_H-elongata_contig63951.13981.1|Name=mRNA_H-elongata_contig63951.13981.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2135bp|location=Sequence derived from alignment at H-elongata_contig63951:1284..3418+ (Himanthalia elongata Himel1 dioecious)
AGCATGGAGACGATCAGCAAATGTTGTTCGAGAACGAGGAACCGTTCCAA TGCGGCATGGCGAAGCCTCTTGATGTAAATATCGTTAATGTAGAGATGGC AAACAATACGCCTCTGTTTCCCAAGTTTTTGATTGTGTAAAAAAACACTA TTCCAAAAAGCTTCGAGTGTTGTTGTCCGAGCCTGCCTATTATGTCAAAC TGCGGTGTAAGCGTCGCCGTCCTCCACGGACGCTTCTGTAGGCCAGCGGG TCCCAGATGTGCACCCAATGCAATGTGAATTGTGAAAATTCTTCTCGTGT TTTGCGTATACTTTGGCTATTATCGTAACACCCAGAATATCTCCTCGCTG CGGACTATTGTATACTATAATCATTTAGTATTAGTAGTTGATCTCGCCGC CGTCGCTACCGTACCAGTCCTCGTATTGATGAGACTTATGCATACATACG TGGAAGCGAATAATCATGGCGTATGTTCAACGTCGTAGATGTCCGAGCAA ACAAAAAGACTCCCTCCCGTGGGTTTTGTGATTATTTTTTATTCGGCAGG TGGACGCCACGAAGAATCTCTTCGGTCCTGGAACCACCAAGCCCGATCTG GTGTTGCTGAAATCACGCGTTTCACGTGCTCATGGCAGGGCCCTGGTGGA GGCCGGGGTACCCCACGTGGTTGCGGTCGAATCGGAAGAGGAAATAACTG GTGCGTCACGAAGGCACCCTCTCTATTAGATGGGCGGGGTCAGCGGCGAA ACTACTGACGTGCTTCTCGAGGGGTGATTTAATTTGGTAATTAGAGAGAG GTTTCAAGCGATTATCAAATTAACTATCTGTGGCACTGTGTATGCGTGCC GCGCGAATTCTGCTGTTGTTGCGAAATGACGTGGTGAAAGACTTGTCTTG CCTGGCTGAGGCGAGTCCCTCGGTTCTTCCTTTCCTTGCCGCTCTCGCTC TTCCGCGATCATCCCGCGCGAAGATATTAATATTTTTTTTGACGACTTCT ACCACGCGCTAATCGTCCAAAAGATGACAATAAAGGACGCCTTCGACTTT GCTGTCGGAACTGAAGCGCCCCAAAAAAAAAATCTCCTTCCTGACGGTGA GCGCGACAGTGTGATCGCTGAGGCCTCTCCCGCTTGCGCGGCTGGACCTT TGGTTTGGTTCATCAGCAGCACGAGAGAACCACCCCCCCCCTCCCCCCGT GATGTGTTCAATTATTATTACCTCGGATTCCTCGCGAGAGATCATCGATT CTCGCTGGCGCCGCTCTGTTCGAAGATTCATTCCGACGCTTTACAAAGGT GTGCACTTCGCGTCTAGGGCAGACCTTCGATGTCAGCCCCTTGAGCTACG AATATCTGTTATATTTTTATTTTTTTTCCAGGCGGGAATCACCAGGTGAA GATATTCAATGACATTGCTGCTGGTAAGTTTGTGAATGAGACCCCTGAGC TGCCGCCGATGCTCGGTCTGCCAAAGGCGAGGGGACAGTACTTTGGCCCG AAAGAGTTTCAGGTAATAGACGGAAGTTTCAGGTTTCCATCGGCTCTCGC CTCTCCTCTGAGCAAAGAGATCTTGCTTCATTGCATTCGTTTGCGGAGTG ATGGATGGTTGGGCTTTAGACTGGGGAAACGACTCAGCACCGACATCGCG TCACCGCTGGCGTTATGAAGAACACCTGGAGACGTACATTTATGACTCAG ATCACAGTGAAGTGATGCTGCGGCCGGGGAGCATTTCTCCTGTCAGCGAG TTCCACCCCCTCCCCCCCTTTTTTTCTAGAGGCGCTTCCACGCCGTTCAA CAGCTCGTCAAGAAGAGCCCCCCCTGTCTTGACAAGTATCACATAGTAAA GACCCCCGCACCATACCACCCAACTGCGCCTGGCAGGTAATGAAGCGTTC TTCAGCATACCCAACTGCGCATTACCATTTGCCTTTCCCGCCCGGGTCCC GCCAACTTGATCGTAAGCTCGCACCTCCTTCTTTTTTTGTCTTTCAAATA TTGCTACTGTGTCTGCAGAAAACAGTGAATCTACTGCAAGATCCTGGTAT AAGATGTGTCTCGATTGTTGGTGAACGTGGAATCGGAAAGACTGAACGGA TGGTACAAGCTTGCCATTATGCGGGCGCGAGAGGG
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Coding sequence (CDS) from alignment at H-elongata_contig63951:1284..3418+

>mRNA_H-elongata_contig63951.13981.1 ID=mRNA_H-elongata_contig63951.13981.1|Name=mRNA_H-elongata_contig63951.13981.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig63951:1284..3418+ (Himanthalia elongata Himel1 dioecious)
ATGTTGTTCGAGAACGAGGAACCGTTCCAATGCGGCATGGCGAAGCCTCT
TGATATGTTGTTCGAGAACGAGGAACCGTTCCAATGCGGCATGGCGAAGC
CTCTTGATGTGGACGCCACGAAGAATCTCTTCGGTCCTGGAACCACCAAG
CCCGATCTGGTGTTGCTGAAATCACGCGTTTCACGTGCTCATGGCAGGGC
CCTGGTGGAGGCCGGGGTACCCCACGTGGTTGCGGTCGAATCGGAAGAGG
AAATAACTGGTGGACGCCACGAAGAATCTCTTCGGTCCTGGAACCACCAA
GCCCGATCTGGTGTTGCTGAAATCACGCGTTTCACGTGCTCATGGCAGGG
CCCTGGTGGAGGCCGGGGTACCCCACGTGGTTGCGGTCGAATCGGAAGAG
GAAATAACTGATATTAATATTTTTTTTGACGACTTCTACCACGCGCTAAT
CGTCCAAAAGATGACAATAAAGGACGCCTTCGACTTTGCTGTCGGAACTG
AAGCGCCCCAAAAAAAAAATCTCCTTCCTGACGATATTAATATTTTTTTT
GACGACTTCTACCACGCGCTAATCGTCCAAAAGATGACAATAAAGGACGC
CTTCGACTTTGCTGTCGGAACTGAAGCGCCCCAAAAAAAAAATCTCCTTC
CTGACGGCGGGAATCACCAGGTGAAGATATTCAATGACATTGCTGCTGGT
AAGTTTGTGAATGAGACCCCTGAGCTGCCGCCGATGCTCGGTCTGCCAAA
GGCGAGGGGACAGTACTTTGGCCCGAAAGAGTTTCAGGCGGGAATCACCA
GGTGAAGATATTCAATGACATTGCTGCTGGTAAGTTTGTGAATGAGACCC
CTGAGCTGCCGCCGATGCTCGGTCTGCCAAAGGCGAGGGGACAGTACTTT
GGCCCGAAAGAGTTTCAGAAAACAGTGAATCTACTGCAAGATCCTGGTAT
AAGATGTGTCTCGATTGTTGGTGAACGTGGAATCGGAAAGACTGAACGGA
TGGTACAAGCTTGCCATTATGCGGGCGCGAGAGGGAAAACAGTGAATCTA
CTGCAAGATCCTGGTATAAGATGTGTCTCGATTGTTGGTGAACGTGGAAT
CGGAAAGACTGAACGGATGGTACAAGCTTGCCATTATGCGGGCGCGAGAG
GG
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