prot_H-elongata_contig117990.1393.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig117990.1393.1
Unique Nameprot_H-elongata_contig117990.1393.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig117990.1393.1 vs. uniprot
Match: D7FRR2_ECTSI (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR2_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.840e-36
Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 0
Query:    1 KAVQALSATLTDKLCSWASGEDSAEFALAEWSRWVDWTLPLQVRDEGRMVTPIGVAPDGRLRVVDPDTGREEILTTEYLL 80
            +AV+ LSA LT+KLCSWASG DSA  A+AEWSRWVDW+LPL++RDEGR V PIGVAPDGRLRVVDP TG EE+LTTEYLL
Sbjct:  222 EAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPIGVAPDGRLRVVDPATGEEELLTTEYLL 301          
BLAST of mRNA_H-elongata_contig117990.1393.1 vs. uniprot
Match: A0A6H5JHA5_9PHAE (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA5_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.700e-33
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    1 KAVQALSATLTDKLCSWASGEDSAEFALAEWSRWVDWTLPLQVRDEGRMVTPIGVAPDGRLRVVDPDTGREEILTTEYLL 80
            +AV+ LSA LT+KLCSWASG DSA  A+AEWSRWVDW+LPL++RDEGR V P+GVAPDGRLRV+DP TG EE+L TEYLL
Sbjct:  481 EAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVMDPATGEEELLATEYLL 560          
BLAST of mRNA_H-elongata_contig117990.1393.1 vs. uniprot
Match: F0Y9I2_AURAN (Uncharacterized protein BPL2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I2_AURAN)

HSP 1 Score: 70.9 bits (172), Expect = 8.100e-13
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    4 QALSATLTDKLCSWASGEDSAEFALAEWSRWVDWTLPLQVRDEGRMVTPIGVAPDGRLRVVDPDTGREEILTTEYLL 80
            +A++  L   L +WA G D A   +A WS +VDW+LPL +RD   +V+P+ + PDGRLRV     G E  L  EYLL
Sbjct:  199 EAIAKDLAAHLSTWADGVDDAPTLVAHWSHFVDWSLPLTLRDTSEVVSPVRLLPDGRLRVRPAAGGPERDLVAEYLL 275          
BLAST of mRNA_H-elongata_contig117990.1393.1 vs. uniprot
Match: A0A7S0GLW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLW3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.880e-8
Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 0
Query:    5 ALSATLTDKLCSWASGED------------SAEFALAEWSRWVDWTLPLQVRD--EGRMVTPIGVAPDGRLRVVDPDTGREEILTTEYLL 80
            AL+  +   +CSW    D            +A+  L EW  WVDW   L VRD  +  ++ P+GV PDG+LRV   D GRE +L  +YLL
Sbjct:  175 ALANNIARDICSWIYYADEISEQGSNNKDANAKILLNEWREWVDWEKELVVRDSTDNEIIVPLGVEPDGQLRVRGQD-GRERLLMVDYLL 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig117990.1393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRR2_ECTSI1.840e-3678.75BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
A0A6H5JHA5_9PHAE1.700e-3375.00BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
F0Y9I2_AURAN8.100e-1345.45Uncharacterized protein BPL2 n=1 Tax=Aureococcus a... [more]
A0A7S0GLW3_9STRA1.880e-838.89Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig117990contigH-elongata_contig117990:1629..1871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig117990.1393.1mRNA_H-elongata_contig117990.1393.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig117990 1629..1871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig117990.1393.1 ID=prot_H-elongata_contig117990.1393.1|Name=mRNA_H-elongata_contig117990.1393.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
KAVQALSATLTDKLCSWASGEDSAEFALAEWSRWVDWTLPLQVRDEGRMV
TPIGVAPDGRLRVVDPDTGREEILTTEYLL*
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