prot_H-elongata_contig63100.13885.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63100.13885.1
Unique Nameprot_H-elongata_contig63100.13885.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A6H5KZK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 6.160e-47
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSNKTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMALLKR 113
            M  Q+AA+AG+S V LGAYGAHGL+ K+DK ++ W TA  YQ+ H+LALATLP +QKT ART AGL FT GITLFSGSIY   L EDK+A+++AP GGI +ILGWATMA+LKR
Sbjct:    1 MLHQIAALAGSSAVGLGAYGAHGLAGKSDKIKADWKTATQYQMFHALALATLPIYQKTPARTAAGLFFTTGITLFSGSIYYACLKEDKKASKVAPAGGICMILGWATMAILKR 113          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A835YJ16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ16_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.740e-44
Identity = 71/113 (62.83%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSNKTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMALLKR 113
            +W  VAA++GASGV LGA GAH L NKT+K ++ WNTA  YQL+HSLALA LPA+Q++ ART AG+LFT+GI LFSGSIYTY+LT++ + +  AP GG+A I GW ++ALLKR
Sbjct:    2 VWHVVAALSGASGVGLGAIGAHRLKNKTEKEKNDWNTATRYQLIHSLALAVLPAYQRSNARTAAGVLFTSGIILFSGSIYTYILTDNIKMSGAAPLGGMAFIAGWLSLALLKR 114          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A485KYZ3_9STRA (Aste57867_13786 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYZ3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.100e-26
Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSN--KTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMAL 110
            +W +V A++GA+ V LGA+GAHGL    K  K    W+TAAHY L+HS+AL  +P    TR     G L T GI  FSGS+YT VLTE K+   + P GG+A I GW  + L
Sbjct:   16 LWWKVGAVSGATAVVLGAFGAHGLQTRVKDPKLLKNWDTAAHYHLMHSIALLVVPF---TRRPNVVGGLLTTGIVFFSGSLYTLVLTEQKKLGMITPLGGLAFIAGWLALLL 124          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A1V9ZTF8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTF8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.560e-25
Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSN--KTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMAL 110
            +W +V A++GA+ V LGA+GAHGL    K  K    W TAAHYQL+HS+AL  +P  ++      AG L  +GI LFSGS+YT VLTE KR   + P GG+  + GW ++ L
Sbjct:   14 IWWKVGAVSGATAVLLGAFGAHGLQTRVKDPKLLKTWETAAHYQLIHSVALLAVPFARRPNL---AGGLIASGIVLFSGSLYTIVLTEHKRLGMITPMGGLMFVAGWLSLLL 122          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A225W8S8_9STRA (Membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8S8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.980e-25
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSN--KTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMAL 110
            MW +V A++GAS V LGA+GAHGL N  K  +    W TAAHYQL+HS+ L   P  ++      AG L T G  LFSGS+Y   LT++K+   + P GG+A++ GW  + L
Sbjct:   12 MWWKVGAVSGASAVLLGAFGAHGLKNHVKDPQLLKNWETAAHYQLIHSVVLLVTPLCKRPGL---AGTLITTGTLLFSGSLYAMTLTQEKKLGIVTPIGGVAIVAGWLALIL 120          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: D8LH09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH09_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 7.480e-25
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0
Query:   16 LGAYGAHGLSNKTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIY 80
            LGAYGAHGLS K+DK ++ W TA  YQ+ H+LALATLP +QKT ART AGLLFT GITLFSGSIY
Sbjct:   17 LGAYGAHGLSGKSDKIKADWKTATQYQMFHALALATLPIYQKTPARTAAGLLFTTGITLFSGSIY 81          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A7S4HJI3_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HJI3_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 3.240e-24
Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 0
Query:    2 WQQVAAIAGASGVALGAYGAHGL----SNKTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMAL 110
            W ++ AI+GA  VA+GA+GAHGL    SN   K  S WNTAAHYQL+HS+ L  L    +T   TG   L + GITLFSGSIY  VLTE K    + P GG+ LI  W ++A+
Sbjct:    6 WLRLGAISGAISVAMGAFGAHGLKKRYSNNPQKVAS-WNTAAHYQLIHSVVLCLLSFTPRTSPLTG--YLLSTGITLFSGSIYLLVLTEWKLLGPVTPIGGLCLIASWISLAI 115          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A7S4IW56_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IW56_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.240e-24
Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    2 WQQ-VAAIAGASGVALGAYGAHGLSNKTDKARSQWNTAAHYQLLHSLALATLPAF---QKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMALLKR 113
            WQ+ V  ++GA+ V  GAYGAHGL  K       + T A Y L+HS  L   P+     +TRA T AG   T GI LF GS Y   +TED+   + AP GG++LILGW ++ALL++
Sbjct:    3 WQRLVGGLSGAASVGAGAYGAHGLRGKDQSYVRSYETGARYHLVHSALLVATPSICGGGRTRAATAAGAFLTTGIGLFCGSCYAVGVTEDRAYGKAAPAGGVSLILGWVSLALLRK 118          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: G5A7C2_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A7C2_PHYSP)

HSP 1 Score: 97.1 bits (240), Expect = 9.750e-24
Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSNKTDKAR--SQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMAL 110
            +W +V A++GAS V LGA+GAHGL N+         W TAAHYQL+HS+ L   P  ++      AG L T G  LFSGS+Y   LT +K+   L P GGIA++ GW  + L
Sbjct:   12 VWWKVGALSGASAVLLGAFGAHGLKNRITDPHLLKNWETAAHYQLIHSVVLLATPMCRRPGL---AGGLITTGTMLFSGSLYVMTLTGEKKLGMLTPVGGIAIVAGWLALIL 120          
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Match: A0A6G0XE60_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE60_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.030e-23
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    1 MWQQVAAIAGASGVALGAYGAHGLSN--KTDKARSQWNTAAHYQLLHSLALATLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIALILGWATMAL 110
            +W +V A++GA+ +A GA+GAH L N  K +K    W T AHY LLHS+AL  +P  ++       G L T G+ LFSGS+Y+ VLT+ K    + P GG+A+I GW  + L
Sbjct:   14 IWWKVGAVSGATAIAFGAFGAHALKNYVKDEKLLKTWETGAHYHLLHSVALLAVPFSRRPNL---VGGLLTTGVLLFSGSLYSIVLTQKKNLGIITPIGGVAMIAGWLALLL 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63100.13885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZK4_9PHAE6.160e-4766.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJ16_9STRA1.740e-4462.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A485KYZ3_9STRA4.100e-2648.21Aste57867_13786 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZTF8_9STRA1.560e-2547.32Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A225W8S8_9STRA5.980e-2545.54Membrane protein n=1 Tax=Phytophthora megakarya Ta... [more]
D8LH09_ECTSI7.480e-2573.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4HJI3_9EUKA3.240e-2450.44Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4IW56_9STRA3.240e-2444.83Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
G5A7C2_PHYSP9.750e-2445.54Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A6G0XE60_9STRA1.030e-2343.75Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006696Protein of unknown function DUF423PFAMPF04241DUF423coord: 16..98
e-value: 1.0E-24
score: 86.5
IPR006696Protein of unknown function DUF423PANTHERPTHR43461FAMILY NOT NAMEDcoord: 2..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 94..111
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63100contigH-elongata_contig63100:1389..3061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63100.13885.1mRNA_H-elongata_contig63100.13885.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63100 710..3091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63100.13885.1 ID=prot_H-elongata_contig63100.13885.1|Name=mRNA_H-elongata_contig63100.13885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MWQQVAAIAGASGVALGAYGAHGLSNKTDKARSQWNTAAHYQLLHSLALA
TLPAFQKTRARTGAGLLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGIA
LILGWATMALLKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006696DUF423