prot_H-elongata_contig63018.13880.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63018.13880.1
Unique Nameprot_H-elongata_contig63018.13880.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A7S2XUU5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU5_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.450e-11
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    5 DFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYG 39
            D N+YLSPFIAAAEI RR+MWGFLRVENEH+++YG
Sbjct:  482 DLNLYLSPFIAAAEICRRSMWGFLRVENEHIQVYG 516          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A7S3YFX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFX7_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 1.840e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    5 DFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYG 39
            D NV+LSPFIAAAEI RR+MWGFLRVENEHL ++G
Sbjct:  258 DINVHLSPFIAAAEICRRSMWGFLRVENEHLHVHG 292          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.320e-8
Identity = 36/75 (48.00%), Postives = 40/75 (53.33%), Query Frame = 0
Query:    1 MFSQDFNVYLSPFIAAAEIIRR----------------------------TMWGFLRVENEHLRIY-GDLSSPGS 46
            +F  DF +YLSPFIAAAEI+RR                            TMWGF+RVENEHLRIY G  SS GS
Sbjct:  726 LFPHDFQIYLSPFIAAAEIVRRLPMSNSSAHPSLGHAATYRPLAPLREGRTMWGFIRVENEHLRIYDGGGSSDGS 800          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A7S2WTB0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTB0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.220e-7
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    4 QDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYG 39
            ++  V LSP +AAAEI RR MWGFLR+ENEHL++YG
Sbjct:  122 KNIQVRLSPVLAAAEICRRCMWGFLRLENEHLQVYG 157          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A7S2SPW5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.150e-7
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    4 QDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYG 39
            ++  V LSP +AAAEI RR MWGFLR+ENEHL++YG
Sbjct:  570 KNIQVRLSPVLAAAEICRRCMWGFLRLENEHLQVYG 605          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.050e-6
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MFSQDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIY-GDLSSPGS 46
            +F  +F  Y +PFI A E + +TMWGF+RVENEHLRIY G  +S GS
Sbjct:  822 LFPPEFPNYPNPFIPATENLPKTMWGFIRVENEHLRIYDGGGTSDGS 868          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A7S2C320_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C320_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.920e-6
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    4 QDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYG 39
            +D  V LSP +A  EI RR +WGFLR+ENEHL +YG
Sbjct:  599 RDLQVRLSPILAGGEICRRCVWGFLRLENEHLHVYG 634          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A1E7F7E5_9STRA (EXS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F7E5_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 4.280e-5
Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    2 FSQDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYGDLSSPGSDVDD 50
            F  D  +Y++P IA+AEI+RR MWG++RVENE +      SS  S++++
Sbjct:  444 FDGDITMYINPIIASAEIVRRIMWGWIRVENEAINDDNKESSESSNLEE 492          
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Match: A0A7R9ZU08_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZU08_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 8.060e-5
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    2 FSQDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRI 37
            F  D + YL+P IA+AEIIRRT+WG+LRVE E +++
Sbjct:  509 FDGDLSAYLNPVIASAEIIRRTLWGWLRVEWEAIKV 544          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63018.13880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A7S2XUU5_9STRA3.450e-1180.00Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S3YFX7_HETAK1.840e-1080.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5KJQ4_9PHAE1.320e-848.00EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2WTB0_9STRA1.220e-766.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SPW5_9STRA2.150e-766.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LHJ2_ECTSI1.050e-657.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2C320_9STRA1.920e-661.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1E7F7E5_9STRA4.280e-544.90EXS domain-containing protein n=1 Tax=Fragilariops... [more]
A0A7R9ZU08_9STRA8.060e-558.33Hypothetical protein n=1 Tax=Pseudo-nitzschia aren... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 11..35
e-value: 5.3E-7
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63018contigH-elongata_contig63018:497..2319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63018.13880.1mRNA_H-elongata_contig63018.13880.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63018 497..3396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63018.13880.1 ID=prot_H-elongata_contig63018.13880.1|Name=mRNA_H-elongata_contig63018.13880.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
MFSQDFNVYLSPFIAAAEIIRRTMWGFLRVENEHLRIYGDLSSPGSDVDD
RSDEGHSRSASTTACSNNAPVAGTGSAAVVGVPASGGVGAGGIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C