prot_H-elongata_contig6299.13876.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6299.13876.1
Unique Nameprot_H-elongata_contig6299.13876.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length288
Homology
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: D7G467_ECTSI (Mitochondrial helicase twinkle n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G467_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 5.560e-164
Identity = 237/283 (83.75%), Postives = 257/283 (90.81%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPLDDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAVYQATG PAVSLPNGASSLPLEVLPLLERF+K+YLWMDHDG GQA VDKFV KLG RRCLVVRP  DDPNPPKDANEALL GR++Q+++DG ASS +HDDIQTFQDLRQ VIHELQ+P EYSGT LQSFPRF +IIKGLRRGELTV TGPTGSGKTTILSQLSLDLAAGGL+TLWGSFEIKNTRL+ KML QFA RP+ DLA SP+SL AVADRFQALPLSF+RFHGGT+VD V+DAMDYAVYANDVQHIILDNLQFMLTR++ EG G KR GP+DKFDAQ
Sbjct:  257 MAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQDFLDG-ASSTKHDDIQTFQDLRQKVIHELQNPLEYSGTGLQSFPRFTRIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVADLAGSPDSLRAVADRFQALPLSFLRFHGGTNVDEVIDAMDYAVYANDVQHIILDNLQFMLTRNSREGHGGKRPGPFDKFDAQ 538          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A835ZLV9_9STRA (Mitochondrial helicase twinkle n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLV9_9STRA)

HSP 1 Score: 353 bits (906), Expect = 1.410e-114
Identity = 178/285 (62.46%), Postives = 216/285 (75.79%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPLDDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAG--PWDKFDAQ 283
            +AVYQATGVPAVSLPNG  SLP++VLP+LERF  +YLWMD+D PGQ    KF +KLG RR  +VRP  DD  P KDANEALL G+ +   +   A   + D+I  F DLR+SV+HE+ +P E+ GT L+SFPR  +I+KG R+GEL+VFTG TG+GKTT+LSQ+SLDLA  G++TLWGSFE++NTRL+ KMLQQF  RP + LA    +LSA+ DRF+ALPL FM FHGGTDVD VL+AM+YAVY NDV HIILDNLQFML+R A      KR G   WDKFDAQ
Sbjct:  287 LAVYQATGVPAVSLPNGCRSLPVDVLPMLERFTTIYLWMDNDAPGQEGAAKFARKLGERRVRIVRPPADDAAPAKDANEALLAGKDLAALL-AAARPLQRDEILHFSDLRESVLHEIMNPMEFVGTPLESFPRLTEIVKGFRQGELSVFTGGTGAGKTTVLSQISLDLARRGVSTLWGSFEVRNTRLVKKMLQQFGGRPPEALAGDAPALSALMDRFEALPLCFMGFHGGTDVDEVLEAMEYAVYVNDVSHIILDNLQFMLSRSA---TSAKRGGMAQWDKFDAQ 567          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: B8LE42_THAPS (Predicted protein n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LE42_THAPS)

HSP 1 Score: 325 bits (832), Expect = 7.550e-103
Identity = 167/297 (56.23%), Postives = 211/297 (71.04%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVD---DPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPL-----------DDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAVYQATG PAVSLPNG  SLP+EVL LLE FD +YLWMD+DGPG+   + F +KLG  RCL+V+P       P PPKDANEALLTG  I E ++  AS   H+ I  F DLR  VIHE+ +P +Y GT + S P F  +IKG RRGELTV TGPTGSGKTT L Q SLDL   G+N LWGSFEIKNTRL+ K+LQQ+ +  L           ++   +  +L+++AD+F++LP+ FM+FHGG+DVD VLDAM+YA Y +DV+HIILDN+QFM++R + EG+G+     +DKFD Q
Sbjct:  307 MAVYQATGRPAVSLPNGCRSLPMEVLLLLENFDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPEPPKDANEALLTGWDINELLEE-ASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVLTGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDLSVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQFMISRQSVEGKGSS----FDKFDMQ 598          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A1Z5K003_FISSO (SF4 helicase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K003_FISSO)

HSP 1 Score: 315 bits (806), Expect = 2.260e-99
Identity = 158/290 (54.48%), Postives = 207/290 (71.38%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDP------NPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPLD-DLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAV+QATG+PA+SLPNG  SLP+EVLPLLE ++K+YLWMD+DGPGQ     F QK+G  RC +V+P ++        + PKDAN+ALL G  ++  I   A    H+ + +F DL+ SV+HE+ HP +Y GT L S P+F  ++KGLRRGELTV TGPTGSGKTT L Q+SLDLA  G+N LWGSFE++NTRL+ K+LQQFAR+PL      S + L  +A RF  LPL F++FHG ++++ VLDAM+YAVY +D +HI+LDNLQFM++R     R       +DKFDAQ
Sbjct:  279 MAVWQATGIPAISLPNGCRSLPVEVLPLLEDYEKIYLWMDNDGPGQEGARVFSQKIGLGRCFMVQPTLESTGCLEFADLPKDANDALLQGHDLKRII-MEAKPVPHEQVLSFSDLQDSVLHEILHPEKYEGTKLPSLPKFSAVVKGLRRGELTVVTGPTGSGKTTFLGQMSLDLAEQGVNVLWGSFEVRNTRLIHKLLQQFARQPLPRGDPSSADKLKDIAKRFGELPLHFLKFHGASELEEVLDAMEYAVYVHDCEHIVLDNLQFMISRQNLASRSGN--SNFDKFDAQ 565          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A1E7FNP2_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNP2_9STRA)

HSP 1 Score: 305 bits (781), Expect = 8.480e-96
Identity = 159/285 (55.79%), Postives = 198/285 (69.47%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARR--PLDDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAV QATG  AVSLPNG  SLP++ LPLLERFDK+YLWMD+D PG+   +KF +KLG  R  +V+         KDAN+ALL        +   A+   HD I TF+DLR  V+ EL  P +YSGT + S PRF +IIKG RRGE+TV TGPTG+GKTT L Q+SLDLA  G N LWGSFEIKNTRLL K+++QF+R   P+     + E   A+ADRF+ LPL FM+FHGG+D+D VLDAM+YAVY NDV+HIILDN+QFM+TR+        +   +DKF+ Q
Sbjct:  262 MAVSQATGRHAVSLPNGCRSLPVQTLPLLERFDKIYLWMDNDEPGREGAEKFAKKLGVNRTYIVQCL-----EAKDANDALLNKDIDLNQVIENATLTPHDRIVTFKDLRNDVLQELLEPDQYSGTPVPSLPRFTQIIKGFRRGEMTVLTGPTGAGKTTFLGQVSLDLAEQGENVLWGSFEIKNTRLLHKLMKQFSRDSLPVSTEVNAREKFEALADRFETLPLYFMKFHGGSDMDEVLDAMEYAVYVNDVEHIILDNMQFMITRNG-------KKSSFDKFEVQ 534          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A8K1FKX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKX8_PYTOL)

HSP 1 Score: 308 bits (788), Expect = 1.080e-95
Identity = 162/283 (57.24%), Postives = 200/283 (70.67%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPLDDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAVYQATG+PAVSLPNG  SLP  VLPLLERF K+YLWMD+D PGQA+V+KF  KLG  RC +VRP  D   P KDAN+ALL G  +++ I   A    HD I TF+ LR+ V  E+ +P    G   ++ P   +++KG R GE+T+ TGPTG GKTT+LSQLSLDL   G+NTLWGSFEIKNTRL+ KML Q A +   +L     +  AVAD+F+ALP+ F+RF G TDVD VLDAM+YAVYA DVQHI+LDN+QFM+   A +GRG      +DKF+ Q
Sbjct:  265 MAVYQATGMPAVSLPNGCQSLPPNVLPLLERFKKIYLWMDNDAPGQASVEKFATKLGITRCFIVRPPADSKKPIKDANDALLAGADLKKLIHL-AEIIPHDQIATFEQLRRDVYEEIVNPIRACGVQSRTLPSLNRLLKGHRLGEVTILTGPTGCGKTTLLSQLSLDLCGQGVNTLWGSFEIKNTRLIHKMLTQLAGK---NLRGDVNAFEAVADKFEALPMYFLRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNVQFMM---AGQGRG------YDKFERQ 534          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A448ZHU2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZHU2_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.490e-94
Identity = 164/286 (57.34%), Postives = 202/286 (70.63%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGR-SIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARR--PLDDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAV+QATG+ AVSLPNG  SLP++VLPLLERFDK+ LWMD D PG+   +KF +KLG  R  +V    D     KDAN+ALL G   ++E I+  A    HD I TF DLR  V+ EL  P  YSGT + S P+F ++IKG RRGE+TV TGPTG GKTT L Q+SLDLA  G N LWGSFEIKNTRLL K+L+QF+R   P++    + E+  A+ADRF+ LPL FM+FHGG+DVD VLDAM+YAVY NDV+HIILDN+QFM+TR + +         WDKF+ Q
Sbjct:  478 MAVHQATGLAAVSLPNGCRSLPVQVLPLLERFDKIVLWMDDDAPGREGAEKFAKKLGIDRTHIVAGRGD----AKDANDALLRGDIDLEERIEQAALVP-HDRIVTFGDLRNDVLKELLEPELYSGTPITSLPKFTQLIKGFRRGEMTVLTGPTGCGKTTFLGQVSLDLAEQGENVLWGSFEIKNTRLLHKLLKQFSRDSLPINTDKNARENFEALADRFETLPLYFMKFHGGSDVDEVLDAMEYAVYVNDVEHIILDNMQFMITRHSQKSS-------WDKFEVQ 751          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A7S2WTT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT8_9STRA)

HSP 1 Score: 298 bits (764), Expect = 7.200e-94
Identity = 155/287 (54.01%), Postives = 197/287 (68.64%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPLDDLARSPES----LSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAVYQATG+PAVSLPNGASSLP++VLPLLE F+K+YLWMD+D  G++  +KF +KLG  RC ++ P    P  PKDANEAL+ G  I   I G A    H  I TF  LR+ V+HE+ HP  Y+GT ++S P F K+IKG R GEL++FTGPTG GKTT+L+Q+SLDLA  G   LWGSFE+ N RL+ K+L Q        +    ++    L+  ADRFQ LP+ FM FHG +D+D VLDAMD+AVY +DVQHII+DNLQFML+R+          G  D+F+ Q
Sbjct:  235 MAVYQATGMPAVSLPNGASSLPVQVLPLLEPFEKIYLWMDNDAAGKSGCEKFARKLGLSRCHIISPS-PGPAVPKDANEALVQGCDIAAII-GDARPPEHSQISTFVHLRERVLHEMMHPELYAGTPVKSLPEFTKVIKGFRPGELSIFTGPTGVGKTTLLAQISLDLAEHGNRMLWGSFEVSNIRLMSKLLTQCGLGAGHQVTPGSKAYQAALNQTADRFQDLPMFFMTFHGSSDLDQVLDAMDFAVYVHDVQHIIIDNLQFMLSRNYR--------GSMDRFEQQ 511          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A7S4AR51_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AR51_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.170e-92
Identity = 165/298 (55.37%), Postives = 201/298 (67.45%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGG-----------ASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPL----DDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQ 283
            MAVYQATG+PAVSLPNG  SLP++VLPLLERF+K+ LWMD D PG+   +KF +KLG +R      F+   +  KDAN+ALL     + Y +             A+   HD I TF DLR  V+ EL  P  YSGT + S P+F  +IKG RRGE+TV TGPTG GKTT L Q+SLDLA  G N LWGSFEIKNTRLL K+L+QF+R  L    D+ AR  E   A+ADRF+ LPL FM+FHGG+DVD VLDAM+YAVY NDV+HIILDN+QFM+TR + +         WDKF+ Q
Sbjct:  468 MAVYQATGLPAVSLPNGCRSLPVQVLPLLERFEKIVLWMDADEPGREGAEKFAKKLGIKRT-----FIAKCDWAKDANDALLLLAGEENYNNNAIDDVIRNCIETAALVPHDRIVTFGDLRDEVLKELLEPELYSGTPIPSLPKFTNLIKGFRRGEMTVLTGPTGCGKTTFLGQISLDLAEQGENVLWGSFEIKNTRLLHKLLKQFSRDSLPISTDENAR--ECFEALADRFENLPLYFMKFHGGSDVDEVLDAMEYAVYVNDVEHIILDNMQFMITRHSQKSS-------WDKFEVQ 751          
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Match: A0A3F2RTD2_9STRA (SF4 helicase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTD2_9STRA)

HSP 1 Score: 296 bits (758), Expect = 3.010e-92
Identity = 160/286 (55.94%), Postives = 200/286 (69.93%), Query Frame = 0
Query:    1 MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVDKFVQKLGARRCLVVRPFVD-DPNPPKDANEALLTGRSIQEYIDGGASSNRHDDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFTGPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPLDDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQHIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQAS 285
            MAVYQATG+PAVSLPNG  SLP  VLPLLERF ++YLWMD+D  GQA V+KF  KLG  RC +VR  VD D +  KDAN+AL  G  +   +   A    H  I TF++LR+ V  E+ +P    G   ++FP   +++KG R GE+TV TGPTG GKTT+LSQLSLDL   G++TLWGSFEIKNTRL+ KML Q A+R   +L+   ++  A ADRF+ALP+ F+RF G TDVD VLDAM+YAVYA DVQHI+LDN+QFM+   A +GRG      +DKF+ Q S
Sbjct:  178 MAVYQATGMPAVSLPNGCQSLPPSVLPLLERFKRIYLWMDNDASGQANVEKFASKLGMTRCYIVRTPVDSDASHVKDANDALRAGLDLTAIV-RAAEIIPHSQITTFEELRREVYDEIVNPLRACGVQSRAFPSLNRLMKGHRMGEVTVLTGPTGCGKTTLLSQLSLDLCGQGVSTLWGSFEIKNTRLMHKMLTQLAQR---NLSGDVKAFEAAADRFEALPMHFLRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNVQFMM---AGQGRG------YDKFERQDS 450          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6299.13876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G467_ECTSI5.560e-16483.75Mitochondrial helicase twinkle n=2 Tax=Ectocarpus ... [more]
A0A835ZLV9_9STRA1.410e-11462.46Mitochondrial helicase twinkle n=1 Tax=Tribonema m... [more]
B8LE42_THAPS7.550e-10356.23Predicted protein n=2 Tax=Thalassiosira pseudonana... [more]
A0A1Z5K003_FISSO2.260e-9954.48SF4 helicase domain-containing protein n=2 Tax=Fis... [more]
A0A1E7FNP2_9STRA8.480e-9655.79p-loop containing nucleoside triphosphate hydrolas... [more]
A0A8K1FKX8_PYTOL1.080e-9557.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A448ZHU2_9STRA1.490e-9457.34Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2WTT8_9STRA7.200e-9454.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4AR51_9STRA1.170e-9255.37Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A3F2RTD2_9STRA3.010e-9255.94SF4 helicase domain-containing protein n=3 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13481AAA_25coord: 130..270
e-value: 2.1E-18
score: 66.6
NoneNo IPR availableGENE3D3.40.1360.10coord: 1..95
e-value: 5.8E-13
score: 51.1
NoneNo IPR availableGENE3D3.40.50.300coord: 114..275
e-value: 9.9E-26
score: 92.5
NoneNo IPR availablePANTHERPTHR12873T7-LIKE MITOCHONDRIAL DNA HELICASEcoord: 1..266
NoneNo IPR availablePANTHERPTHR12873:SF0TWINKLE PROTEIN, MITOCHONDRIALcoord: 1..266
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 3..85
IPR007694DNA helicase, DnaB-like, C-terminalPROSITEPS51199SF4_HELICASEcoord: 120..287
score: 21.142
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 137..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6299contigH-elongata_contig6299:617..2692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6299.13876.1mRNA_H-elongata_contig6299.13876.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6299 599..2692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6299.13876.1 ID=prot_H-elongata_contig6299.13876.1|Name=mRNA_H-elongata_contig6299.13876.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
MAVYQATGVPAVSLPNGASSLPLEVLPLLERFDKLYLWMDHDGPGQAAVD
KFVQKLGARRCLVVRPFVDDPNPPKDANEALLTGRSIQEYIDGGASSNRH
DDIQTFQDLRQSVIHELQHPREYSGTALQSFPRFMKIIKGLRRGELTVFT
GPTGSGKTTILSQLSLDLAAGGLNTLWGSFEIKNTRLLLKMLQQFARRPL
DDLARSPESLSAVADRFQALPLSFMRFHGGTDVDAVLDAMDYAVYANDVQ
HIILDNLQFMLTRDAHEGRGTKRAGPWDKFDAQASLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007694DNA_helicase_DnaB-like_C
IPR027417P-loop_NTPase