prot_H-elongata_contig62644.13839.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig62644.13839.1
Unique Name	prot_H-elongata_contig62644.13839.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	290

Homology

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BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5L7T1_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T1_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 3.870e-64
Identity = 137/255 (53.73%), Postives = 164/255 (64.31%), Query Frame = 0

Query:   42 MHGCCGRGIGEEGFGQQRECTDCQRITPGDKSGSSSSPMEVDGDGEQENXXXXXXXXXXXXXXXXXXXXXXXXVAG-----------PVGSAAXGAAPKKAKKSKPGSDHGKNKLTPAQRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFT-ATKIGLSGIMIQTQATKFASEMG-IQFTASNGWLHRFLNRYSFKHVDLHGEAGDVD 283
            MHG CGRGIGEEGFGQQRE T CQ+ T   K G+ +SPMEVD  G+ E+XXXXXXXXXXXX              G             G      A K+ + SKPG + GKNK +  QRL+I++E + G KRS VA ++N+GTSYISKLM PE IA LE  RDMELNQDALR P PVH  +E++  +  +      T AT+IG+SG MIQ QA K A++MG   F A++GWLHRFL RYSF HV LHGE GD D
Sbjct:    1 MHGFCGRGIGEEGFGQQRERTYCQKRTTSGKIGTGTSPMEVDSSGDNEDXXXXXXXXXXXXLLGCVQSLGGAAGLGGXXXXXXXXXXAAGDGTVSVA-KEVRMSKPGRNTGKNKFSMTQRLQIVNEAQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELENVRDMELNQDALRAPKPVHDEVEEKHASGSRSHEHALTQATRIGVSGSMIQAQALKIAAQMGKTNFKATHGWLHRFLKRYSFTHVQLHGEPGDED 254

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BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 1.010e-63
Identity = 128/284 (45.07%), Postives = 157/284 (55.28%), Query Frame = 0

Query:    1 MQRFLQSAGASPASGLKPCEEPTCSIPG-LVSGVHLCPCGRRMHGCCGRGIGEEGFGQQRECTDCQRITPGDKSGSSSSPMEVDGDGEQENXXXXXXXXXXXXXXXXXXXXXXXXVAGPVGSAAXGAAPKKA--------------------------------------------------------KKSKPGSDHGKNKLTPAQRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARF 227
            M+RFL SAG S A+GL+PC EPTC     LVS VH CPCGR MH  CGRGIGEEG+GQQREC+DCQ+   G ++GSSSSPMEVD +  +++                         AG  GSA   AAP +                                                         +K+KPGSDHGKNKLT  QRL+I+  ++ G++RS VA ++ +G +YI+KLMKPE IA+LE++RDMELN DA R PTPVH GLE RL  WIKIAR RF
Sbjct:    1 MERFLPSAGGSSAAGLRPCGEPTCQQKSQLVSAVHQCPCGRSMHAFCGRGIGEEGYGQQRECSDCQKSKGGAQAGSSSSPMEVDAEENEQDSRSTTQPFRVEEPSVGGKGKRPAADAGVGGSAGKRAAPGRGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVAGDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRF 284

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BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.390e-60
Identity = 104/146 (71.23%), Postives = 122/146 (83.56%), Query Frame = 0

Query:  140 HGKNKLTPAQRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEMGIQ-FTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            HG+NKLT  QRL+++ +++AG++RS VA  Y + TSYISKLMKP+ +A L ++RD ELN DALR PTPVH  LEKRLL WIK+ARARF  TKIGLSGIMIQTQATKFASEMG + FTAS GWLHRFL RY FKH++LHGEAGDVDK
Sbjct:  165 HGQNKLTTGQRLQLVRDVQAGKQRSKVAATYGVTTSYISKLMKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDK 310

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5JT55_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT55_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 4.900e-54
Identity = 121/287 (42.16%), Postives = 141/287 (49.13%), Query Frame = 0

Query:    1 MQRFLQSAGASPASGLKPCEEPTCSIPGL-VSGVHLCPCGRRMHGCCGRGIGEEGFGQQRECTDCQRITPGDKSGSSSSPMEVDGDGEQE-NXXXXXXXXXXXXXXXXXXXXXXXXVAGPVGSAAXGAAPKKAKKSKPGSDHGKNKLTPAQRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEMG-IQFTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            M RFL S G    +  K C EPTC++  L ++ VH CPCG+ MHG CGRGIGEEGFGQQRECTDCQR T   K G+ +SPMEV+   + E N                         AG  G  A G A                           +E+  G                                      QDALR P PVH  +E++L  WIKIARARF  TKIG+SG MIQ QA K A++MG   F A++GWLHRFL RYSF HV LHGEAGDVDK
Sbjct:    1 MDRFLPSIGGPTHAAKKTCGEPTCAMRSLLITAVHQCPCGQPMHGFCGRGIGEEGFGQQRECTDCQRRTTTGKIGTGTSPMEVNSSSDNEDNSSRTRQRAGGKESEFARKGKRPQRTAGRGGGGAAGGA---------------------------AEVPRGE----------------------------XXXXXXXXXQDALRAPKPVHDEVEEKLRKWIKIARARFNETKIGVSGSMIQAQALKIAAQMGKTNFKATSGWLHRFLIRYSFTHVQLHGEAGDVDK 232

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5JPF0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF0_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.010e-52
Identity = 89/137 (64.96%), Postives = 105/137 (76.64%), Query Frame = 0

Query:  149 QRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEMG-IQFTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            QRL+I+ E++ G  RS VA + N+GTSYI KLM PE +A LE+ RDMELNQDALR P PVH  +E++L  WIKIARARF ATKIG+SG MIQ QA + A++MG   F A+ GWLHRFL RYSF  V LHGEAGDVDK
Sbjct:    3 QRLQIVKEVQGGATRSMVAAKRNVGTSYIGKLMMPEKVAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFNATKIGVSGSMIQAQALEIAAQMGKTNFRATKGWLHRFLKRYSFTRVQLHGEAGDVDK 139

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 8.390e-52
Identity = 93/137 (67.88%), Postives = 109/137 (79.56%), Query Frame = 0

Query:  149 QRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEMG-IQFTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            QRL I+ E++ G KRS VA ++N+GTSYISKLM PE IA LE+ RDMELNQDALR P PVH  +E++L  WIKIARARF ATK+G+SG MIQ QA K A++MG   F A+NGWL+RFL RYSF HV LHGEAGDVDK
Sbjct:    3 QRLHIVKEVQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDK 139

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5KZ62_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ62_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.630e-47
Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = 0

Query:  166 VAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEMG-IQFTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            VA + N+GTSYISKLM PE IA LE+ RDMELNQDALR P PVH  +E++L  WIKIARARF ATKIG+   MIQ QA K A++MG   F A+NGWLHRFL RYSF +V LHGEAGD+DK
Sbjct:    2 VAAKRNVGTSYISKLMNPEKIAELEKFRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFNATKIGVRSSMIQAQALKIAAQMGKTNFKATNGWLHRFLKRYSFTYVQLHGEAGDMDK 121

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.220e-46
Identity = 97/191 (50.79%), Postives = 117/191 (61.26%), Query Frame = 0

Query:  133 KSKPGSDHGKNKLTPAQRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFT---------------------------------ATKIGLSGIMIQTQATKFASEMGI-QFTASNGWLHRFLNRYSFKHVDLHGEAGDVDKKAAEK 289
            K+K GSDHG+NKLT AQR KI+  ++ GR+RS VA +YN+G +Y+SKLMKP  IAALE+ARD+ELN  A R PTP+H  LE                                                 TK+GLSGIMIQTQATKFA+EM +  FTASNGWLHRF +RY   H++LHGEAGDV+K AAEK
Sbjct:  112 KAKSGSDHGENKLTIAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSKLMKPPMIAALEKARDIELNMGAKRTPTPIHAELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKLGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEK 302

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.010e-43
Identity = 81/105 (77.14%), Postives = 89/105 (84.76%), Query Frame = 0

Query:  181 MKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEMGIQ-FTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            MKP+ +A L ++RD ELN DALR PTPVH  LEKRLL WIK+ARARF  TKIGLSGIMIQTQATKFASEMG + FTAS GWLHRFL RY FKH++LHGEAGDVDK
Sbjct:    1 MKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDK 105

[Close]

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 2.140e-43
Identity = 95/186 (51.08%), Postives = 118/186 (63.44%), Query Frame = 0

Query:  125 GAAPKKAKKSKPGSDHGKNKLTPAQRLKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQDALRVPTPVHTGLEKRLLAWIKIARARF-TATKIGL----SGIMIQT--------------------QATKFASEMG-IQFTASNGWLHRFLNRYSFKHVDLHGEAGDVDK 284
            G+  K+ + SKPG + GKNKL+  QRL+I+ E++ G KRS VA ++++GT Y SK M PE IA L++ RDMELNQDALR P PVH  +E++L  WIKIARARF  +T   L    SG  +                      QA K A++MG   F A+NGWLHRFL RYSF HV LHGEAGDVDK
Sbjct:   74 GSVAKEVRVSKPGRNTGKNKLSMTQRLRIVKEVQGGTKRSMVAAKWSVGTWYTSKFMNPEKIAELKKIRDMELNQDALRAPRPVHDEVEEKLRKWIKIARARFDVSTHFALVMCWSGYNLVAYTPITFRPYTSSHSRPSCWAQALKIAAQMGKTNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDK 259

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot

BLAST of mRNA_H-elongata_contig62644.13839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L7T1_9PHAE	3.870e-64	53.73	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JYC6_9PHAE	1.010e-63	45.07	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JV64_9PHAE	1.390e-60	71.23	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JT55_9PHAE	4.900e-54	42.16	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JPF0_9PHAE	5.010e-52	64.96	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JNS8_9PHAE	8.390e-52	67.88	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KZ62_9PHAE	1.630e-47	68.33	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KA74_9PHAE	2.220e-46	50.79	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JEY2_9PHAE	1.010e-43	77.14	HTH CENPB-type domain-containing protein n=2 Tax=E...	[more]
A0A6H5K0Y4_9PHAE	2.140e-43	51.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006600	HTH CenpB-type DNA-binding domain	SMART	SM00674	cenpb	coord: 206..274 e-value: 1.5E-9 score: 47.7
IPR006600	HTH CenpB-type DNA-binding domain	PFAM	PF03221	HTH_Tnp_Tc5	coord: 212..272 e-value: 7.2E-11 score: 42.0
IPR006600	HTH CenpB-type DNA-binding domain	PROSITE	PS51253	HTH_CENPB	coord: 200..274 score: 12.591
None	No IPR available	GENE3D	1.10.10.60		coord: 208..268 e-value: 4.0E-13 score: 51.3
None	No IPR available	PANTHER	PTHR19303:SF11	JERKY PROTEIN HOMOLOG	coord: 128..288
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 128..288
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 206..268
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 143..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig62644	contig	H-elongata_contig62644:1607..3295 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig62644.13839.1	mRNA_H-elongata_contig62644.13839.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig62644 1607..3295 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig62644.13839.1 ID=prot_H-elongata_contig62644.13839.1|Name=mRNA_H-elongata_contig62644.13839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=290bp
MQRFLQSAGASPASGLKPCEEPTCSIPGLVSGVHLCPCGRRMHGCCGRGI
GEEGFGQQRECTDCQRITPGDKSGSSSSPMEVDGDGEQENSSSTTKTSGG
KEQRAEGGGKRREAVAGPVGSAAAGAAPKKAKKSKPGSDHGKNKLTPAQR
LKIISEIKAGRKRSTVAEEYNIGTSYISKLMKPEAIAALEEARDMELNQD
ALRVPTPVHTGLEKRLLAWIKIARARFTATKIGLSGIMIQTQATKFASEM
GIQFTASNGWLHRFLNRYSFKHVDLHGEAGDVDKKAAEKK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006600	HTH_CenpB_DNA-bd_dom
IPR009057	Homeobox-like_sf