mRNA_H-elongata_contig62560.13827.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: D8LB56_ECTSI (Glyoxalase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB56_ECTSI) HSP 1 Score: 508 bits (1308), Expect = 2.650e-173 Identity = 261/320 (81.56%), Postives = 283/320 (88.44%), Query Frame = 1
Query: 1 QGYSWAAAGGGGILISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFACNRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEKLQHTAGVTSAVTTPEEVAEAVAAA-GDGVVLLDFGAGWCKNCKKMLPAVEKFASGPLKNKLKVLTVDIDEAEELADEYDVSGVPSFVALRGGSGKKEADYKGNDPAALEAKVSAL 957
+GY+ AAA GGG+LISGPDGYKYKA+P++EGRKERFVSVGL+VSDL +STAYWCDLLGMSKFS PAP S+ G+G G ETVGY EEQVKLDLLQ PIDHGLASGR+AFAC+ VPPIHSEAAAA SG VITPPLTLPTPGKADVVVTILGDPDGYEIC+VEA AFYQLAEPKYDVIDF RATRGGDGAAPPK EKLQH AGVT+AVTTPEEVAEAVAAA GDG+VLLDFGAGWCKNCKKM+PA+EK A+GPL KLKVLTVDIDEA+ELADEYDVSGVP+FVALRGG G K +YKGNDPAALEAK+SAL
Sbjct: 110 EGYACAAASGGGVLISGPDGYKYKAIPSIEGRKERFVSVGLKVSDLPASTAYWCDLLGMSKFSAPAPVSEPGDG--VGLLSETVGYGEEQVKLDLLQAPGAEK-TPIDHGLASGRIAFACDLVPPIHSEAAAAASGTVITPPLTLPTPGKADVVVTILGDPDGYEICFVEAVAFYQLAEPKYDVIDFESRATRGGDGAAPPKSEKLQHAAGVTAAVTTPEEVAEAVAAASGDGLVLLDFGAGWCKNCKKMVPAIEKLATGPLGEKLKVLTVDIDEADELADEYDVSGVPTFVALRGGRGDKADEYKGNDPAALEAKISAL 426
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A0M0J531_9EUKA (Glyoxalase domain-containing protein 4-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J531_9EUKA) HSP 1 Score: 276 bits (706), Expect = 4.420e-83 Identity = 158/309 (51.13%), Postives = 202/309 (65.37%), Query Frame = 1
Query: 28 GGGILISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFACNRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEKLQHTAGVTSAVTTPEEVAEAVAAAGDGVVLLDFGAGWCKNCKKMLPAVEKFASGPLKNKLKVLTVDIDEAEELADEYDVSGVPSFVALRGGSGKKEADYKGNDPAALEAKVSA 954
GG +I GPD ++YK V GR ER ++VGLR +DLA++ YWCD+LGM+ F PA DAG + TVG+A EQ L Q +DV AP+DH LASGR+A +C V P + A A+G G ++ P+TLPTPGKADVVVTIL DPDGYEIC+V FY LA+P YD +++ RATRGGDGAAPPK ++ +H A AVT +V+ A++ GVV+LDFGAGWCKNCK +LP VE A+ + TVDIDEA EL + Y ++ VP FV L+GG+ K +Y G+ LEAKV A
Sbjct: 122 GGMPVIKGPDNFRYKIVEPSAGRAERILAVGLRSTDLAATKQYWCDVLGMTVFPTPA-GCDAGHKSSL-----TVGWAAEQTHL---QFIDVGDSAPMDHALASGRIANSCRAVYPFYEAAEASGKGSIMNKPITLPTPGKADVVVTILADPDGYEICFVGDIGFYDLAKPLYDKVNWELRATRGGDGAAPPKPDQ-KHQAKGLRAVTESSQVSSLAASSATGVVVLDFGAGWCKNCKSILPFVETLATAL--PDVAFATVDIDEAGELVEAYQITAVPHFVVLKGGA--KVDEYVGSKGTDLEAKVRA 416
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S3UXG7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXG7_HETAK) HSP 1 Score: 259 bits (662), Expect = 1.170e-74 Identity = 154/306 (50.33%), Postives = 191/306 (62.42%), Query Frame = 1
Query: 37 ILISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFAC--NRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEKLQHTAGVTSAVTTPEEVAEAVAAAGDGVVLLDFGAGWCKNCKKMLPAVEKFASGPLKNKLKVLTVDIDEAEELADEYDVSGVPSFVALRGGSGKKEADYKGNDPAALEAKV 948
+ I GPD Y Y+ +P V GR E F +V +RV+D+ + Y+ LLG+ + S P D G A VG+A EQV+L L+Q G +DH +SGR+AFAC VP IH +A AG ++TPPLTLPTPGKADVVVTIL DPDGYEIC+VE EAFY LA P YDVIDF ERA+RGGDGA PPK EKLQH A + AA D +V++DFGAGWCKNCKK+ PAV K A+ + + VDI EAE+LA EY+VS VP + + G+ K DY G+ + AKV
Sbjct: 116 LNIDGPDNYTYRIIPQVHGRTEEFATVCIRVADVEKAKDYYVSLLGLGEQST-FPGLDQLANGAPSCA---VGFAGEQVRLLLVQ---TEPGVAVDHAKSSGRIAFACPTGSVPGIHQKAKDAGE-TIMTPPLTLPTPGKADVVVTILADPDGYEICFVEDEAFYDLATPTYDVIDFKERASRGGDGAPPPKAEKLQHAAELKXXXXXXXXXXILRAAGPDRLVVVDFGAGWCKNCKKIAPAVGKMAA-KYADHADFVAVDISEAEDLAIEYEVSSVPRLLYFKNGA--KVDDYLGSTVGEIRAKV 410
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S3UZB1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZB1_HETAK) HSP 1 Score: 220 bits (560), Expect = 1.110e-61 Identity = 130/247 (52.63%), Postives = 156/247 (63.16%), Query Frame = 1
Query: 214 GEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFAC--NRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEKLQHTAGVTSAVTTPEEVAEAVAAAGDGVVLLDFGAGWCKNCKKMLPAVEKFASGPLKNKLKVLTVDIDEAEELADEYDVSGVPSFVALRGGSGKKEADYKGNDPAALEAKV 948
G G G VG+A EQV L+L+++ GA +DH SGR+AFAC VP IH AG ++TPPLTLPT GKADVVVTIL DPDGYEIC+VE EAFY LA P YDVIDF ERA+RGGDGA PPK EKLQH A + AA D +V++DFGAGWCKNCKK+ PAV K A+ + + VDI EAE+LA EY+VS VP + + G+ K DY G+ + AKV
Sbjct: 1 GPRGAGGRRSRLVGFAGEQVMLELVEK----DGAAVDHAERSGRIAFACPTGSVPGIHQMVKDAGH-TIMTPPLTLPTEGKADVVVTILADPDGYEICFVEDEAFYDLATPTYDVIDFKERASRGGDGAPPPKAEKLQHAAELKXXXXXXXXXXILRAAGPDRLVVVDFGAGWCKNCKKIAPAVGKMAA-KYADHADFVAVDISEAEDLAIEYEVSSVPRLLYFKNGA--KVDDYLGSTVGEIRAKV 239
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A835YGN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGN6_9STRA) HSP 1 Score: 219 bits (558), Expect = 2.860e-60 Identity = 158/423 (37.35%), Postives = 200/423 (47.28%), Query Frame = 1
Query: 43 ISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDL------LQRLDVPAGAPIDHGLASGRVAFACNR--VPPIHS-------------------------------------------------------------------------------EAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEKLQHTAGVTSAVTTPEEVAEAVAAAGDGVVLLDFGAGWCKNCKKMLPAVEKFASGPLKNKLKVLTVDIDEAE-----------------------------ELADEYDVSGVPSFVALRGGSGKKEADYKGNDPAALEAKVSALFE 963
++GPDGY+++ VP ++GR ERFVSV +RVSD +S YWC LLG+++ P P D A TVG+ +Q LQ L A AP+DH L+ GR AFAC VP IH+ E G G V+TPPLTLPTPGKADVVVTIL DPD YEIC+VE AFY LA P YDV+D+ RAT GGDGA PPK KL+H A VT VTT E++ + V AG VLL+FGAGWCKNCKK+ PA+E+ AS ++ V VDIDEA+ +LAD + V+ VP + L+ G+ K ++ G L A V+ +
Sbjct: 122 VTGPDGYRFRIVPEIQGRAERFVSVAIRVSDANASEKYWCGLLGLTQQRSP-PGCDV-----SAQAQLTVGFGADQXXXXXXXXXVSLQLLQTAAAAPVDHALSGGRAAFACGTPAVPAIHAMVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERCLCG-GAVLTPPLTLPTPGKADVVVTILADPDDYEICFVEDAAFYDLATPTYDVVDWGLRATMGGDGAPPPKA-KLEHAASVTP-VTTEEDLDQLVKQAGGKAVLLEFGAGWCKNCKKLAPALEQLASQEAA-RMVVGAVDIDEAQXXXXXXXXXXXXXXXXXXXQDGTFNDDEFDLADAHGVTRVPHVLLLKAGA--KAWEHTGPTKEELMAGVARALQ 532
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S2ELB3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ELB3_TRICV) HSP 1 Score: 202 bits (514), Expect = 4.300e-55 Identity = 117/237 (49.37%), Postives = 142/237 (59.92%), Query Frame = 1
Query: 40 LISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFACNRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGA-APPKGEKLQHTAGVTSAVTTPEEVAEA---VAAAGDGVVLLDFGAGWCKNC 738
++ GPDGY+Y V GR ERF V LR SDL + YWC +LGM++F PA +D G GG TVG+A +Q L + D P+DH LASGR+A AC V P H+ A + G G V+ PP+TLPTPGKADVVVTIL DPDGYEIC+V E FY LA P YD +D+ R RGGDGA AP + E T + T VAE ++A G L+FGA WCKNC
Sbjct: 190 IVVGPDGYRYAIVDPAAGRAERFWGVCLRSSDLDKTREYWCGVLGMTEFPTPAGLADLGGGGRS----LTVGWAPDQAHLRFVDPGD---SVPVDHALASGRIANACRSVEPFHNAAVSTGLGGVLNPPVTLPTPGKADVVVTILTDPDGYEICFVGDEGFYDLAVPLYDKVDWDLRTRRGGDGAPAPGRKEATAGTKPGEGGIPTVTGVAETESLASSAPSGAADLEFGAMWCKNC 419
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S2V686_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V686_9STRA) HSP 1 Score: 186 bits (473), Expect = 7.200e-50 Identity = 105/191 (54.97%), Postives = 126/191 (65.97%), Query Frame = 1
Query: 31 GGILISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFACNRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPP 603
G +ISGPD YKYK VP G ERFV+VGLRV LA + Y+ D+LGM + P ++ + T+G+ +QVKL L++ D GA + H L+SGR+AFA VPPI EA V TPPLTLPTPGKADVVVTIL D DGYEIC+VE EAFY LA PKYD+ID+ ERA+RG DGA PP
Sbjct: 174 GSGVISGPDNYKYKIVPECAGVAERFVAVGLRVKSLAKAKEYYGDILGMKEMEA-VPGTETSDPSV------TLGFGPDQVKLQLIEVAD---GAEVSHALSSGRIAFATKSVPPIF-EAVTEAKETVQTPPLTLPTPGKADVVVTILVDRDGYEICFVEDEAFYDLATPKYDIIDYQERASRGADGAPPP 353
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S4L734_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L734_9EUKA) HSP 1 Score: 159 bits (401), Expect = 1.120e-41 Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1
Query: 310 GAPIDHGLASGRVAFACNR-VPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPK------GEKLQHTAGVTSAVTTPEEVAEAVAAAGDGVVLLDFGAGWCKNCKKMLPAVEKFASGPLKNKLKVLTVDIDEAEELADEYDVSGVPSFVALRGG 888
G +DH L+SGR+AFA V PI + +G V+TPPLTLPTPGKADVVVTIL D DGYEIC+VE FY+LA P YD ID+ R +GGDG P G+K+ H G + T A G+G+ ++D+ AGWCK CKK+ P VE A G ++ ++ T+D+DE++E A + VS VP+FV +GG
Sbjct: 1 GKEVDHALSSGRIAFATRAGVKPIFDKVTESGD-TVLTPPLTLPTPGKADVVVTILADRDGYEICFVEEVGFYELATPTYDNIDWEARGKKGGDGNPLPTSTPIAHGDKMVHLEGESGLDT---------AKGGEGLAVVDWSAGWCKVCKKIAPEVEGLA-GKMEG-VRFYTMDVDESDEAAVQLGVSKVPAFVFFKGG 188
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S3UYM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM7_HETAK) HSP 1 Score: 166 bits (419), Expect = 2.190e-41 Identity = 102/197 (51.78%), Postives = 120/197 (60.91%), Query Frame = 1
Query: 31 GGILISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTAYWCDLLGMSKFSPPAPASDAGEGGTKGYACETVGYAEEQVKLDLLQRLDVPAGAPIDHGLASGRVAFAC--NRVPPIHSEAAAAGSGKVITPPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEK 615
G I GPD Y ++ V ERF V LRVSDL + AYWC LLG++KF PA A VG+ QVKL L+Q D G +DH + GR+AFAC VP I+ + AG V+ PPLTLPT GKADVVVTIL DPDGYEIC+VE EAFY LA P YDVID+ +R +RG DGA PP G+K
Sbjct: 256 GAQYIVGPDSYCFR-VAERRPAAERFQCVALRVSDLPRAEAYWCGLLGLAKFEVPAHLGVADPS-------LLVGFDGGQVKLQLIQVND---GHAVDHAQSGGRIAFACPTGSVPGIYQKVKDAGHA-VMPPPLTLPTEGKADVVVTILADPDGYEICFVEDEAFYDLATPLYDVIDWVDRESRGADGAPPPGGKK 440
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Match: A0A7S2V7Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Q7_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.580e-41 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 1
Query: 421 PPLTLPTPGKADVVVTILGDPDGYEICYVEAEAFYQLAEPKYDVIDFAERATRGGDGAAPPKGEKLQHTAGVTSAVTTPEEVAEAVAAAGDGVVLLDFGAGWCKNCKKMLPAVEKFA 771
PPLTLPTPGKADVVVTIL D DGYEIC+VE EAFY LA P YDVIDF ERATRGGDGA PP +KL+H + V T E++ EA+ AAG +V+LDFGAGWCKNC+++LP V A
Sbjct: 1 PPLTLPTPGKADVVVTILVDRDGYEICFVEDEAFYDLATPTYDVIDFLERATRGGDGAPPPAVKKLEHVEEMPG-VETEEDLEEALKAAGKKLVVLDFGAGWCKNCQRILPTVNLMA 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62560.13827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62560.13827.1 >prot_H-elongata_contig62560.13827.1 ID=prot_H-elongata_contig62560.13827.1|Name=mRNA_H-elongata_contig62560.13827.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=322bp QGYSWAAAGGGGILISGPDGYKYKAVPTVEGRKERFVSVGLRVSDLASSTback to top mRNA from alignment at H-elongata_contig62560:2..3126- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62560.13827.1 ID=mRNA_H-elongata_contig62560.13827.1|Name=mRNA_H-elongata_contig62560.13827.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3125bp|location=Sequence derived from alignment at H-elongata_contig62560:2..3126- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62560:2..3126- >mRNA_H-elongata_contig62560.13827.1 ID=mRNA_H-elongata_contig62560.13827.1|Name=mRNA_H-elongata_contig62560.13827.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1932bp|location=Sequence derived from alignment at H-elongata_contig62560:2..3126- (Himanthalia elongata Himel1 dioecious)back to top |