mRNA_H-elongata_contig62181.13787.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 245 bits (625), Expect = 4.240e-67 Identity = 143/386 (37.05%), Postives = 217/386 (56.22%), Query Frame = 1
Query: 28 EAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSWT-STSYLEADVEEEIYVELP--EAYRDSRKQVGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTNIVPSAAGG-KVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITYGGEPGGGPSYQR--GSTQTTAPARTRVVQCLEG 1167
EA+ +WP+W+ I E+D A G W +V RP V+ ++ V + K + G I+KYK RLVA+GF QV GV Y ++ +P + +SIR++L++ GW S+ +++YL + ++E++Y+E P A+ D + V L KA+YGL G W + L GF R AD V + G ++V+ V++DD L+ +++R + ++ + + I DLG S+ LG I+ D AGTL QH YI+ + RF T V ++LSK+ P++ AEV MR++ YRE +GALM+AA TRPDI+FA LA+F NPG HW A ++ +YL TR L + YGG+ Y G+TQ A T V ++G
Sbjct: 803 EAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYK-HEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQRELEGYVNADGATQEHRRAITGYVFLVDG 1187
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 242 bits (618), Expect = 4.240e-66 Identity = 145/392 (36.99%), Postives = 220/392 (56.12%), Query Frame = 1
Query: 19 TMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSWT-STSYLEA--DVEEEIYVELPE--AYRDSRKQVGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVT--KTNIVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITYGGEPGGGPSY--QRGSTQTTAPARTRVVQCLEG 1167
T+ EA+ +WP+W I E++ G W +V+RP V+G++ V + K D G I+KYK RLVAQGF Q+ G+ Y E+ +P + +SIR++L++ GW+ S+ +++YL + D +E IY+E P A +D + V LRKA+YGL G W + I L GF R+ +D V I + V+ +++DD + ++ + R + +P+ DLG S+ LG + RDR A TL QH YI ++ RF T K + +P + L+KS P + A++ MR+I YRE +G+LM+AA TRPDISFA LA+F+ NPG HW A ++ +YL T+NL + YGG G Y G++Q A T V ++G
Sbjct: 965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVFFAI-DANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQEHRHAITGYVFLVDG 1354
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A4S4K4Q2_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K4Q2_9APHY) HSP 1 Score: 240 bits (613), Expect = 1.940e-65 Identity = 150/392 (38.27%), Postives = 221/392 (56.38%), Query Frame = 1
Query: 19 TMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSWT-STSYLEA--DVEEEIYVELPEAY--RDSRKQVGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVT--KTNIVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITYGGEPGGGPSY--QRGSTQTTAPARTRVVQCLEG 1167
T+ EA+ +W +W I E++ W VVERP G V+G++ V + K D G I+KYK RLVAQGF QV GV Y E+ +P + ASIR+VL++ GWE S+ +++YL + D +EEIY+E P + +D + V L+KA+YGL G W + I L GF+R+ AD V + G +V++ +++DD ++ + Q R+L + + DLG S+ LG +TRD A TL QH YI ++ RF T K + +P + L KS P + ++ MR+I YRE +G+LM+AA TRPDISFA LA+F+ NPG IHW A ++ +YL T+ L + YGG G Y G++Q A + V ++G
Sbjct: 965 TLEEARKRPDWAKWLAAIKAELESLIRNDTWTVVERPLGVNVVGSKWVLRIKKDATGAIDKYKARLVAQGFTQVYGVDYFETFAPVAKIASIRLVLAIAARNGWEVQSFDFNSAYLNSVLDDDEEIYLEQPPQFSLKDPKLHVLRLKKALYGLKQGGRKWYEHLCIALADLGFKRAEADYGVFYAKV-GESLVLLAIHVDDCIITGNSSTLISQYKRQLGDKYSLTDLGPVSWLLGIKVTRDLEARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNIQFL-KSQCPTSLIDIARMRKIPYREAIGSLMYAAVGTRPDISFAVSTLAQFSHNPGWIHWEAVKRVFRYLLGTKMLVLQYGGVQQGLQGYVDADGASQEHRHAISGYVFLVDG 1354
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A2P6SMQ0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SMQ0_ROSCH) HSP 1 Score: 235 bits (600), Expect = 2.580e-65 Identity = 130/362 (35.91%), Postives = 207/362 (57.18%), Query Frame = 1
Query: 4 DPEPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSW-TSTSYLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTK--TNIVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITY 1074
D +PT+ +A S++ W + + E+D GVW +V+ + +G + VFK K D G IE++K RLVA+GF Q +G+++ E+ SP S S R++++++ E T++L ++EEEI++ PE + ++ K+ V L+K++YGL A W K F + + GF + D CV +++ G + +++Y+DD+L+AS+ + + L S F +K+LG ASY LG I RDR G L Q YI + +RFG+ VP + G K L+K+ P+T+ E EM I Y +VG+LM+A TRPD+SFA L++F NPG HW A +K L+YL T++ + Y
Sbjct: 245 DNDPTSFKQATGSNDSDAWTQAMIAELDSMYKNGVWELVKPKENHKPIGCKWVFKTKRDVSGNIERHKARLVAKGFTQKEGIYFTETFSPVSTKDSFRIIMALVAHYDMELHQMDVKTAFLNGELEEEIFMVQPEGFIEAGKENMVCRLKKSIYGLKQASRQWYKKFDSVVSSFGFTENLVDECVYLKVV-GNNFIFLILYVDDILLASSNVKLLKDTKAFLSSNFDMKELGEASYVLGIEIKRDRKQGLLGLSQQNYISKILKRFGMETCANGEVPMSKGDK-LTKNQCPKTENEKTEMESIPYARLVGSLMYAQVCTRPDLSFAVGMLSRFQSNPGHEHWTAGKKVLRYLQRTKDYMLVY 604
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR) HSP 1 Score: 226 bits (575), Expect = 7.860e-65 Identity = 122/359 (33.98%), Postives = 202/359 (56.27%), Query Frame = 1
Query: 10 EPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSW-TSTSYLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTN-IVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITY 1074
+P++ EA S + +W + E++ VW +VE G +G + V+K K+D +G +E++K RLVA+G+ Q +G+ Y+E+ SP S S+R+V++++ E T++L ++ E++Y+ PE ++ K+ V L+K+ YGL A W F ++ GF + D C + + G+ ++V+Y+DD+L+AS + ++ R L S F +KDLG ASY +G I RDR +GTL Q YI V R+ + + +V G V P+T+ E E+MR I Y +VG++M+A TRPDI++ A L ++ NPG HW+A +K L+YL T++ +TY
Sbjct: 35 DPSSYNEAITSDQSSEWHNAMIDELESMDKNNVWELVELLNGAKPVGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYLK-MSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRYLQGTKDYKLTY 392
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A1J3K4I8_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K4I8_NOCCA) HSP 1 Score: 238 bits (608), Expect = 8.040e-65 Identity = 133/360 (36.94%), Postives = 198/360 (55.00%), Query Frame = 1
Query: 10 EPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSW-TSTSYLEADVEEEIYVELPEAY--RDSRKQVGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTK--TNIVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITY 1074
+P + +A +W EID GVW +V P+G +G + +FK K+D +G +E+YK RLVA+GF Q +G+ Y E+ SP S S+R++L+++ E T++L D+EEE+Y+ PE + V L+K++YGL A W F + GF+ + DPC+ + G+ + +V+Y+DD+L+AS+ Q L F +KD+G ASY +G I RDR+ G L Q YI V ERF + +++VP G K L PQ + E EM++ Y +VG+LM+A TRPDIS A L +F NPG +HW+AA+K L+YL TRN +TY
Sbjct: 817 DPVSYSQAMKDVNCDKWIDASKDEIDSMVKNGVWDIVPLPEGHKAVGCKWIFKTKLDCNGNVERYKARLVAKGFNQKEGIDYCETFSPVSRKDSLRIILALVAQYDLELHQMDVKTAFLNGDLEEEVYMRQPEGFIIEGQEDMVCKLKKSIYGLKQASRQWYLKFDEIITNFGFKENIVDPCIYLK-FSGSKFIFLVLYVDDILLASSDLGLLHQTKNYLSKNFDMKDMGEASYVIGIEIFRDRSLGILGLSQKAYIDRVLERFSMLSCSSSVVPMQKGDK-LDLKQCPQNEMERNEMQKYPYASLVGSLMYAQVCTRPDISHAVGMLGRFQSNPGIVHWQAAKKVLRYLKGTRNHMLTY 1174
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY) HSP 1 Score: 234 bits (597), Expect = 9.710e-65 Identity = 136/360 (37.78%), Postives = 205/360 (56.94%), Query Frame = 1
Query: 10 EPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSW-TSTSYLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTK--TNIVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITY 1074
+P++ +A SS+ +W + E+ VW +V+ P G +G + VFK K D G+IE+YK RLVA+GF Q +GV Y+E+ SP S+ S R+V++++ E T++L D+ E++Y+ P+ ++ S K+ V L+K++YGL A W F + + GF+ + D C+ +I G+ ++ +V+Y+DD+L+AS + R L F +KDLG AS+ LG I RDR+ G L Q YI V ERF ++ P G K LSK PQ D E EM++I Y VG+LM+A TRPDI+FA L +F +PG HWRAA+K L+YL T++ +TY
Sbjct: 277 DPSSYSQAIQSSQSTKWIDAMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYLKI-SGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDK-LSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTY 634
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 235 bits (599), Expect = 1.390e-64 Identity = 139/361 (38.50%), Postives = 201/361 (55.68%), Query Frame = 1
Query: 10 EPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSWTST-SYLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHAGLMW*KAFGIELEAK-GFQRS*ADPCV-LRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTNIVPSAAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITYGGE 1083
EP T+ EAQA+ EWP+WKR + EI G + + P G+ +G R V++ K D DGRI +YK RLVAQGF Q G+ Y E+ +P S+R++L++ E + +YL AD++EEIY+ P Y + + LRKA+YGL AG W L A GFQR +DPCV L++ G +V + ++DD+ + T + L + I DLG LG I+RDR TL Q QYIQTV +RF + N V + V K DA++ EM+ + Y+ ++G+LM+AA TRPDIS+A L++++ PG HW AA++ L+YL T++ GI Y G+
Sbjct: 14 EPRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLKKSPKGLTIVGM--HVDDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGFEISRDRKKRTLSIKQSQYIQTVLDRFKMADCNPVTTPLDPNV--KLCKEPEDADLSEMKGVPYQALIGSLMYAALGTRPDISYAVQALSQYSARPGITHWTAAKRVLRYLKGTQDFGILYSGK 370
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI) HSP 1 Score: 227 bits (578), Expect = 3.350e-64 Identity = 124/364 (34.07%), Postives = 206/364 (56.59%), Query Frame = 1
Query: 1 LDPEPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSW-TSTSYLEADVEEEIYVELPEAYR--DSRKQVGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTNIVPS---AAGGKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITY 1074
L+ +P ++ + + SS +W + + E+ GVW +VE PKG +G + +FK K D G I +YK RLVA+GF Q +G+ Y+E+ SP S+ S R++++++ E T++L +++E IY+ PE + DS++ V L++++YGL A W + F + + GF+ + D C+ + G+ +++V+Y+DD+L+AS+ + +R L S F +KDLG AS+ LG I RDR+ G L Q YI V RFG++ N P A G S P+ + E ++M + Y VG+LM+A TRPDI++ L ++ NPG HW+ A++ ++YL T++ +TY
Sbjct: 3 LEDDPISLSQVKQSSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMS--NYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTY 363
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR) HSP 1 Score: 228 bits (581), Expect = 4.040e-64 Identity = 125/361 (34.63%), Postives = 205/361 (56.79%), Query Frame = 1
Query: 10 EPTTMGEAQASSEWPQWKRVIAREIDGQTARGVW*VVERPKGKTVLGTRVVFKPKIDKDGRIEKYKCRLVAQGFRQVKGVHYEESSSPTSAHASIRMVLSMIEALGWEGGSW-TSTSYLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYGLVHAGLMW*KAFGIELEAKGFQRS*ADPCVLRRILHGTVVVVIVVYLDDLLVASATKRDEEQAVRELCSCFPIKDLGVASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTNIVPSAAG---GKVLSKSDSPQTDAEVEEMRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALQYLWHTRNLGITY 1074
+PTT +A + QW + E+ VW + E P G +G + V+K K+D +G IE+YK RLVA+G+ Q +G+ Y+E+ SP S S+R+V++++ E T++L D+ E+++++ PE + K+ V L K++YGL A W F ++ F ++ D C+ +I G+ V++V+Y+DD+L+AS ++ R L + F +KDLG ASY +G I R+R+ GTL Q YI+ + +RF + + + PS A G P+++AE+++MR I Y +VG+LM+A TRPDI++ L ++ NPG HW+AA+K L+YL T+ +TY
Sbjct: 109 DPTTFKDAMNCDQSTQWLDAMKDELKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCS--PSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKKVLRYLQGTKEYKLTY 466 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62181.13787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62181.13787.1 >prot_H-elongata_contig62181.13787.1 ID=prot_H-elongata_contig62181.13787.1|Name=mRNA_H-elongata_contig62181.13787.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp MRQISYREIVGALMWAATITRPDISFAAHQLAKFNDNPGPIHWRAAQKALback to top mRNA from alignment at H-elongata_contig62181:369..1915- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62181.13787.1 ID=mRNA_H-elongata_contig62181.13787.1|Name=mRNA_H-elongata_contig62181.13787.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1547bp|location=Sequence derived from alignment at H-elongata_contig62181:369..1915- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62181:369..1915- >mRNA_H-elongata_contig62181.13787.1 ID=mRNA_H-elongata_contig62181.13787.1|Name=mRNA_H-elongata_contig62181.13787.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at H-elongata_contig62181:369..1915- (Himanthalia elongata Himel1 dioecious)back to top |