prot_H-elongata_contig61443.13698.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61443.13698.1
Unique Nameprot_H-elongata_contig61443.13698.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.710e-103
Identity = 153/176 (86.93%), Postives = 173/176 (98.30%), Query Frame = 0
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            +LAVSDSKL NAIK+KLSIKCVNDSGVME+MRGIRGQL+ LLTSVGD+NL+AMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEW+GWHFPEMAKI+NDNM+YAK+VVRMGVRTECK+CDFSDI+ED+DM +DLKEAAEVSMGTEIT++D+++IK+LADQ
Sbjct:   88 KLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQ 263          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)

HSP 1 Score: 266 bits (680), Expect = 6.970e-85
Identity = 133/176 (75.57%), Postives = 153/176 (86.93%), Query Frame = 0
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            +LAV+DSKLG  IK+KL IKC+NDSGVME+MRGIR QL+ LL  VG++NL+AMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EWYGWHFPEMAKI+NDNM YAK V+RMG R  C+  DFSDI+ DD +   LKE AE+SMGTEIT +D+ +I ALA+Q
Sbjct:   88 KLAVADSKLGGVIKDKLEIKCINDSGVMELMRGIRLQLDGLLVGVGEQNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPEMAKILNDNMHYAKCVLRMGTRDRCRAHDFSDIIGDDAIEHTLKENAEISMGTEITEMDLKSISALAEQ 263          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A7S2UY01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY01_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.470e-79
Identity = 123/176 (69.89%), Postives = 147/176 (83.52%), Query Frame = 0
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            Q+AV DSKLG  +K+KL I+CVNDS VME+MRG+R Q+E LL+ V + ++RA RLGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAK+V DN+ Y++ ++ MG R   K  DFS +LEDD + + LK +AEVSMGTEI  +DV +IKALADQ
Sbjct:   33 QMAVIDSKLGGLVKDKLDIQCVNDSKVMELMRGVRQQMETLLSGVSEHDMRATRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKVVGDNLQYSRCILLMGTRDHAKSTDFSSVLEDDSVEKALKASAEVSMGTEINDIDVASIKALADQ 208          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A812NHD2_SYMMI (NOP5-2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHD2_SYMMI)

HSP 1 Score: 245 bits (625), Expect = 4.450e-76
Identity = 120/176 (68.18%), Postives = 146/176 (82.95%), Query Frame = 0
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            +LAV+D+KLG  +KEK+ I+CV+   VME+ RGIR Q++ LL  V D  LR+M+LGLSHSLSRYKLKFSADKVD MIVQAIGLLD+LDKEINTYAMRV+EWYGWHFPEMA+I++DNM YAK+V+RMG+RTECK  DFSDIL D+ +   LK+ AE SMGTEI+  D+  IKAL +Q
Sbjct:   87 ELAVADTKLGGLLKEKMDIQCVHSDKVMEIFRGIRSQMDTLLAGVEDGALRSMQLGLSHSLSRYKLKFSADKVDIMIVQAIGLLDDLDKEINTYAMRVREWYGWHFPEMARILSDNMFYAKIVLRMGMRTECKKYDFSDILGDETLEETLKKTAETSMGTEISESDLTNIKALCEQ 262          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A482T053_9ARCH (NOSIC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T053_9ARCH)

HSP 1 Score: 231 bits (588), Expect = 8.800e-74
Identity = 117/177 (66.10%), Postives = 143/177 (80.79%), Query Frame = 0
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDEN-LRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            +LAV+D KLG  IKEKL IKCV++  V ++ RG+R  +E LL    DE  L++M+LGLSHSLSRYKLKFSADKVD M+VQAIGLLD+LDKEIN YAMRV+EWYGWHFPEM KIVNDN+ YAK V+RMG+RT CK+CDFSDIL D+ M   LK+ AE SMGTEI+  D+ +I++LA +
Sbjct:   73 ELAVADVKLGAVIKEKLDIKCVHNDTVFDLFRGVRENIEELLGGGLDEGTLKSMQLGLSHSLSRYKLKFSADKVDIMVVQAIGLLDDLDKEINIYAMRVREWYGWHFPEMVKIVNDNIHYAKSVLRMGMRTHCKNCDFSDILGDETMEETLKKTAETSMGTEISEFDLQSIQSLATE 249          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A804MV98_MAIZE (Nop domain-containing protein n=6 Tax=Zea mays TaxID=4577 RepID=A0A804MV98_MAIZE)

HSP 1 Score: 231 bits (589), Expect = 1.100e-73
Identity = 113/175 (64.57%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    2 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            LAV+DSKLGNAIKEKL I C+++S VME+MRG+R QL  L+T +G ++L  M LGLSHSLSRYKLKFS +KVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+ KIV DN+ YAK+V  MG R    + DFS+IL D+++   LKEAA +SMGTE++ +D+  I+ L DQ
Sbjct:   24 LAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVTDNIQYAKVVKMMGNRVNAVNLDFSEILSDEELETQLKEAAVISMGTEVSDLDLSNIRELCDQ 198          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A3L6G2H4_MAIZE (Putative nucleolar protein 5-2 n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6G2H4_MAIZE)

HSP 1 Score: 231 bits (589), Expect = 7.350e-73
Identity = 113/175 (64.57%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    2 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            LAV+DSKLGNAIKEKL I C+++S VME+MRG+R QL  L+T +G ++L  M LGLSHSLSRYKLKFS +KVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+ KIV DN+ YAK+V  MG R    + DFS+IL D+++   LKEAA +SMGTE++ +D+  I+ L DQ
Sbjct:   24 LAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVTDNIQYAKVVKMMGNRVNAVNLDFSEILSDEELETQLKEAAVISMGTEVSDLDLSNIRELCDQ 198          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A2U1QD43_ARTAN (Nop domain, NOP5, NOSIC n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QD43_ARTAN)

HSP 1 Score: 237 bits (604), Expect = 1.070e-72
Identity = 120/175 (68.57%), Postives = 144/175 (82.29%), Query Frame = 0
Query:    2 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            LAV+DSKLGNAIKEKL I CV++ GVME+MRG+R QL  L+T +G ++L  M LGLSHSLSR+ LKFSADKVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+AKIV DN+LYAK V  MG RT     DFS+IL +D +  +LKEAA VSMGTE++ +D+I IK L DQ
Sbjct:   85 LAVADSKLGNAIKEKLQIDCVHNQGVMELMRGVRSQLTELITGLGAQDLAPMSLGLSHSLSRHTLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGYRTNAAQLDFSEILPED-VEAELKEAAVVSMGTEVSDLDLINIKDLCDQ 258          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A2R6R1I0_ACTCC (Nucleolar protein like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6R1I0_ACTCC)

HSP 1 Score: 229 bits (585), Expect = 1.090e-72
Identity = 114/175 (65.14%), Postives = 144/175 (82.29%), Query Frame = 0
Query:    2 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            LAV+DSKLGNAIKEKL I+CV+++ VME+MRG+R QL  L++ +  ++L  M LGLSHSLSRYKLKFS DKVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+AKI+ DN+LYAK V  MG R+     DFS+IL +D +  +LKEAA +SMGTE++ +D++ IK L DQ
Sbjct:   85 LAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTDLISGLATQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGSRSNAAKLDFSEILPED-VETELKEAAMISMGTEVSDLDLMNIKELCDQ 258          
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A3P6D6T8_BRAOL (NOSIC domain-containing protein n=1 Tax=Brassica oleracea TaxID=3712 RepID=A0A3P6D6T8_BRAOL)

HSP 1 Score: 229 bits (584), Expect = 1.700e-72
Identity = 112/175 (64.00%), Postives = 146/175 (83.43%), Query Frame = 0
Query:    2 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 176
            LAV+DSKLGN IKEKL+I CV+++ VME++RG+R QL  L+T +G+++L  M LGLSHSL+RYKLKFS+DKVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+AKI++DN+LYAK V  MG R      DFS+IL D+ +  +LKEA+ +SMGTE++ +D+I I+ L DQ
Sbjct:   85 LAVADSKLGNIIKEKLTIDCVHNNAVMELLRGVRSQLSELITGLGEQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRINAAKLDFSEILADE-VEAELKEASVISMGTEVSDLDLIHIRELCDQ 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXU6_ECTSI1.710e-10386.93Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YZD1_9STRA6.970e-8575.57Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2UY01_9STRA2.470e-7969.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A812NHD2_SYMMI4.450e-7668.18NOP5-2 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A482T053_9ARCH8.800e-7466.10NOSIC domain-containing protein n=1 Tax=archaeon T... [more]
A0A804MV98_MAIZE1.100e-7364.57Nop domain-containing protein n=6 Tax=Zea mays Tax... [more]
A0A3L6G2H4_MAIZE7.350e-7364.57Putative nucleolar protein 5-2 n=2 Tax=Zea mays Ta... [more]
A0A2U1QD43_ARTAN1.070e-7268.57Nop domain, NOP5, NOSIC n=1 Tax=Artemisia annua Ta... [more]
A0A2R6R1I0_ACTCC1.090e-7265.14Nucleolar protein like n=1 Tax=Actinidia chinensis... [more]
A0A3P6D6T8_BRAOL1.700e-7264.00NOSIC domain-containing protein n=1 Tax=Brassica o... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012976NOSICSMARTSM00931NOSIC_2coord: 76..128
e-value: 1.6E-30
score: 117.4
IPR002687Nop domainPFAMPF01798Nopcoord: 83..176
e-value: 2.2E-20
score: 73.1
NoneNo IPR availableGENE3D1.10.150.460coord: 107..158
e-value: 1.3E-37
score: 130.6
NoneNo IPR availablePANTHERPTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58coord: 1..176
NoneNo IPR availablePANTHERPTHR10894:SF1NUCLEOLAR PROTEIN 58coord: 1..176
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660coord: 77..176
e-value: 1.3E-37
score: 130.6
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 70..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61443contigH-elongata_contig61443:184..3400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61443.13698.1mRNA_H-elongata_contig61443.13698.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61443 184..3400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61443.13698.1 ID=prot_H-elongata_contig61443.13698.1|Name=mRNA_H-elongata_contig61443.13698.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENL
RAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKE
WYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDL
KEAAEVSMGTEITIVDVITIKALADQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012976NOSIC
IPR002687Nop_dom
IPR029012Helix_hairpin_bin_sf
IPR036070Nop_dom_sf