mRNA_H-elongata_contig61443.13698.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig61443.13698.1
Unique NamemRNA_H-elongata_contig61443.13698.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.710e-103
Identity = 153/176 (86.93%), Postives = 173/176 (98.30%), Query Frame = 1 
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            +LAVSDSKL NAIK+KLSIKCVNDSGVME+MRGIRGQL+ LLTSVGD+NL+AMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEW+GWHFPEMAKI+NDNM+YAK+VVRMGVRTECK+CDFSDI+ED+DM +DLKEAAEVSMGTEIT++D+++IK+LADQ
Sbjct:   88 KLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQ 263
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)

HSP 1 Score: 266 bits (680), Expect = 6.970e-85
Identity = 133/176 (75.57%), Postives = 153/176 (86.93%), Query Frame = 1 
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            +LAV+DSKLG  IK+KL IKC+NDSGVME+MRGIR QL+ LL  VG++NL+AMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EWYGWHFPEMAKI+NDNM YAK V+RMG R  C+  DFSDI+ DD +   LKE AE+SMGTEIT +D+ +I ALA+Q
Sbjct:   88 KLAVADSKLGGVIKDKLEIKCINDSGVMELMRGIRLQLDGLLVGVGEQNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPEMAKILNDNMHYAKCVLRMGTRDRCRAHDFSDIIGDDAIEHTLKENAEISMGTEITEMDLKSISALAEQ 263
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A7S2UY01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY01_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.470e-79
Identity = 123/176 (69.89%), Postives = 147/176 (83.52%), Query Frame = 1 
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            Q+AV DSKLG  +K+KL I+CVNDS VME+MRG+R Q+E LL+ V + ++RA RLGLSHSLSRYKLKFSADKVDTM+VQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAK+V DN+ Y++ ++ MG R   K  DFS +LEDD + + LK +AEVSMGTEI  +DV +IKALADQ
Sbjct:   33 QMAVIDSKLGGLVKDKLDIQCVNDSKVMELMRGVRQQMETLLSGVSEHDMRATRLGLSHSLSRYKLKFSADKVDTMVVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKVVGDNLQYSRCILLMGTRDHAKSTDFSSVLEDDSVEKALKASAEVSMGTEINDIDVASIKALADQ 208
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A812NHD2_SYMMI (NOP5-2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHD2_SYMMI)

HSP 1 Score: 245 bits (625), Expect = 4.450e-76
Identity = 120/176 (68.18%), Postives = 146/176 (82.95%), Query Frame = 1 
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            +LAV+D+KLG  +KEK+ I+CV+   VME+ RGIR Q++ LL  V D  LR+M+LGLSHSLSRYKLKFSADKVD MIVQAIGLLD+LDKEINTYAMRV+EWYGWHFPEMA+I++DNM YAK+V+RMG+RTECK  DFSDIL D+ +   LK+ AE SMGTEI+  D+  IKAL +Q
Sbjct:   87 ELAVADTKLGGLLKEKMDIQCVHSDKVMEIFRGIRSQMDTLLAGVEDGALRSMQLGLSHSLSRYKLKFSADKVDIMIVQAIGLLDDLDKEINTYAMRVREWYGWHFPEMARILSDNMFYAKIVLRMGMRTECKKYDFSDILGDETLEETLKKTAETSMGTEISESDLTNIKALCEQ 262
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A482T053_9ARCH (NOSIC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T053_9ARCH)

HSP 1 Score: 231 bits (588), Expect = 8.800e-74
Identity = 117/177 (66.10%), Postives = 143/177 (80.79%), Query Frame = 1 
Query:    1 QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDEN-LRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            +LAV+D KLG  IKEKL IKCV++  V ++ RG+R  +E LL    DE  L++M+LGLSHSLSRYKLKFSADKVD M+VQAIGLLD+LDKEIN YAMRV+EWYGWHFPEM KIVNDN+ YAK V+RMG+RT CK+CDFSDIL D+ M   LK+ AE SMGTEI+  D+ +I++LA +
Sbjct:   73 ELAVADVKLGAVIKEKLDIKCVHNDTVFDLFRGVRENIEELLGGGLDEGTLKSMQLGLSHSLSRYKLKFSADKVDIMVVQAIGLLDDLDKEINIYAMRVREWYGWHFPEMVKIVNDNIHYAKSVLRMGMRTHCKNCDFSDILGDETMEETLKKTAETSMGTEISEFDLQSIQSLATE 249
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A804MV98_MAIZE (Nop domain-containing protein n=6 Tax=Zea mays TaxID=4577 RepID=A0A804MV98_MAIZE)

HSP 1 Score: 231 bits (589), Expect = 1.100e-73
Identity = 113/175 (64.57%), Postives = 142/175 (81.14%), Query Frame = 1 
Query:    4 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            LAV+DSKLGNAIKEKL I C+++S VME+MRG+R QL  L+T +G ++L  M LGLSHSLSRYKLKFS +KVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+ KIV DN+ YAK+V  MG R    + DFS+IL D+++   LKEAA +SMGTE++ +D+  I+ L DQ
Sbjct:   24 LAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVTDNIQYAKVVKMMGNRVNAVNLDFSEILSDEELETQLKEAAVISMGTEVSDLDLSNIRELCDQ 198
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A3L6G2H4_MAIZE (Putative nucleolar protein 5-2 n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6G2H4_MAIZE)

HSP 1 Score: 231 bits (589), Expect = 7.350e-73
Identity = 113/175 (64.57%), Postives = 142/175 (81.14%), Query Frame = 1 
Query:    4 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            LAV+DSKLGNAIKEKL I C+++S VME+MRG+R QL  L+T +G ++L  M LGLSHSLSRYKLKFS +KVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+ KIV DN+ YAK+V  MG R    + DFS+IL D+++   LKEAA +SMGTE++ +D+  I+ L DQ
Sbjct:   24 LAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVTDNIQYAKVVKMMGNRVNAVNLDFSEILSDEELETQLKEAAVISMGTEVSDLDLSNIRELCDQ 198
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A2U1QD43_ARTAN (Nop domain, NOP5, NOSIC n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QD43_ARTAN)

HSP 1 Score: 237 bits (604), Expect = 1.070e-72
Identity = 120/175 (68.57%), Postives = 144/175 (82.29%), Query Frame = 1 
Query:    4 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            LAV+DSKLGNAIKEKL I CV++ GVME+MRG+R QL  L+T +G ++L  M LGLSHSLSR+ LKFSADKVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+AKIV DN+LYAK V  MG RT     DFS+IL +D +  +LKEAA VSMGTE++ +D+I IK L DQ
Sbjct:   85 LAVADSKLGNAIKEKLQIDCVHNQGVMELMRGVRSQLTELITGLGAQDLAPMSLGLSHSLSRHTLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGYRTNAAQLDFSEILPED-VEAELKEAAVVSMGTEVSDLDLINIKDLCDQ 258
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A2R6R1I0_ACTCC (Nucleolar protein like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6R1I0_ACTCC)

HSP 1 Score: 229 bits (585), Expect = 1.090e-72
Identity = 114/175 (65.14%), Postives = 144/175 (82.29%), Query Frame = 1 
Query:    4 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            LAV+DSKLGNAIKEKL I+CV+++ VME+MRG+R QL  L++ +  ++L  M LGLSHSLSRYKLKFS DKVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+AKI+ DN+LYAK V  MG R+     DFS+IL +D +  +LKEAA +SMGTE++ +D++ IK L DQ
Sbjct:   85 LAVADSKLGNAIKEKLQIECVHNNTVMELMRGVRSQLTDLISGLATQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNILYAKAVKLMGSRSNAAKLDFSEILPED-VETELKEAAMISMGTEVSDLDLMNIKELCDQ 258
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BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Match: A0A3P6D6T8_BRAOL (NOSIC domain-containing protein n=1 Tax=Brassica oleracea TaxID=3712 RepID=A0A3P6D6T8_BRAOL)

HSP 1 Score: 229 bits (584), Expect = 1.700e-72
Identity = 112/175 (64.00%), Postives = 146/175 (83.43%), Query Frame = 1 
Query:    4 LAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDLKEAAEVSMGTEITIVDVITIKALADQ 528
            LAV+DSKLGN IKEKL+I CV+++ VME++RG+R QL  L+T +G+++L  M LGLSHSL+RYKLKFS+DKVDTMI+QAIGLLD+LDKE+NTYAMRV+EWYGWHFPE+AKI++DN+LYAK V  MG R      DFS+IL D+ +  +LKEA+ +SMGTE++ +D+I I+ L DQ
Sbjct:   85 LAVADSKLGNIIKEKLTIDCVHNNAVMELLRGVRSQLSELITGLGEQDLAPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRINAAKLDFSEILADE-VEAELKEASVISMGTEVSDLDLIHIRELCDQ 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61443.13698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXU6_ECTSI1.710e-10386.93Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YZD1_9STRA6.970e-8575.57Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2UY01_9STRA2.470e-7969.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A812NHD2_SYMMI4.450e-7668.18NOP5-2 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A482T053_9ARCH8.800e-7466.10NOSIC domain-containing protein n=1 Tax=archaeon T... [more]
A0A804MV98_MAIZE1.100e-7364.57Nop domain-containing protein n=6 Tax=Zea mays Tax... [more]
A0A3L6G2H4_MAIZE7.350e-7364.57Putative nucleolar protein 5-2 n=2 Tax=Zea mays Ta... [more]
A0A2U1QD43_ARTAN1.070e-7268.57Nop domain, NOP5, NOSIC n=1 Tax=Artemisia annua Ta... [more]
A0A2R6R1I0_ACTCC1.090e-7265.14Nucleolar protein like n=1 Tax=Actinidia chinensis... [more]
A0A3P6D6T8_BRAOL1.700e-7264.00NOSIC domain-containing protein n=1 Tax=Brassica o... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61443contigH-elongata_contig61443:184..3400 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.3
Seed ortholog evalue1.1e-84
Seed eggNOG ortholog2880.D7FXU6
Preferred nameNOP58
KEGG koko:K14565
KEGG Pathwayko03008,map03008
GOsGO:0000154,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001085,GO:0001091,GO:0001094,GO:0001098,GO:0001099,GO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0015030,GO:0016049,GO:0016070,GO:0016072,GO:0016604,GO:0019899,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031428,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033036,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0048254,GO:0051117,GO:0051179,GO:0070013,GO:0070761,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsCOG1498@1,KOG2572@2759
Ec32 ortholog descriptionNOP58 subunit of the C/D ribonucleoprotein complex
Ec32 orthologEc-23_001460.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size528
Cds size528
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61443.13698.1prot_H-elongata_contig61443.13698.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig61443 184..3400 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930991.915943-CDS-H-elongata_contig61443:183..3991622930991.915943-CDS-H-elongata_contig61443:183..399Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 184..399 +
1691679653.5819156-CDS-H-elongata_contig61443:183..3991691679653.5819156-CDS-H-elongata_contig61443:183..399Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 184..399 +
1622930991.931563-CDS-H-elongata_contig61443:2125..22421622930991.931563-CDS-H-elongata_contig61443:2125..2242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 2126..2242 +
1691679653.6016622-CDS-H-elongata_contig61443:2125..22421691679653.6016622-CDS-H-elongata_contig61443:2125..2242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 2126..2242 +
1622930991.9529736-CDS-H-elongata_contig61443:2652..27541622930991.9529736-CDS-H-elongata_contig61443:2652..2754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 2653..2754 +
1691679653.6182876-CDS-H-elongata_contig61443:2652..27541691679653.6182876-CDS-H-elongata_contig61443:2652..2754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 2653..2754 +
1622930991.9686074-CDS-H-elongata_contig61443:3307..34001622930991.9686074-CDS-H-elongata_contig61443:3307..3400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 3308..3400 +
1691679653.6341648-CDS-H-elongata_contig61443:3307..34001691679653.6341648-CDS-H-elongata_contig61443:3307..3400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61443 3308..3400 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig61443.13698.1

>prot_H-elongata_contig61443.13698.1 ID=prot_H-elongata_contig61443.13698.1|Name=mRNA_H-elongata_contig61443.13698.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
QLAVSDSKLGNAIKEKLSIKCVNDSGVMEVMRGIRGQLEALLTSVGDENL
RAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKE
WYGWHFPEMAKIVNDNMLYAKLVVRMGVRTECKHCDFSDILEDDDMARDL
KEAAEVSMGTEITIVDVITIKALADQ
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mRNA from alignment at H-elongata_contig61443:184..3400+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig61443.13698.1 ID=mRNA_H-elongata_contig61443.13698.1|Name=mRNA_H-elongata_contig61443.13698.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3217bp|location=Sequence derived from alignment at H-elongata_contig61443:184..3400+ (Himanthalia elongata Himel1 dioecious)
CAGCTGGCGGTGTCGGACTCGAAGCTCGGCAACGCCATCAAGGAGAAGCT
ATCCATCAAGTGCGTGAACGACTCGGGGGTGATGGAGGTGATGCGTGGCA
TCCGGGGACAGCTGGAGGCCCTCTTGACTTCAGTTGGGGACGAAAATCTT
CGTGCGATGCGCCTGGGCCTGAGCCATTCCTTGTCTCGCTATAAGCTTAA
GTTTTCGGCGGATAAGGTGAGGTATTATGATTATGGTTATGGTTTATGCA
GATGATCCGTAGTATATATATATACTGTAGCTCGGGGGGACGCTTCCCCC
TATCCCCTCCCCCCTATCTGCCTCCCGGGTTGGCTATTGTCTCTTCTTTT
GTGGCATGGGGCTGTCAAATTGATGTACTACTAGGGCATGATGGAGAGTT
GATGTAGATTGTCCTTGTGAGGTTAGATGCCTCGGTCGGCGAGCCTTGTT
GTATGTTGTCTCTCTCCTCAAATGGGTTAAAACGCATAATATTCTTTGGA
ATACTACGTAAAAAAAATGGATTGTTCGGGAGCCCTAGGGTGGCCATGGA
CTAACGAGAGAGTTGGGTGAGGTCAGAGACCTCGAGGCAAGAACGTTATT
TTTCTCCACAGCGGTTACTACGTGGATCACATTATTTAGAGTCCTTACTG
AAGAATGGATCGTTGGGAAGCCTTAGAGCATCCATAGACTGTGATCTTAC
GAGAGTACTCTCCGCCAGGGTATTTCAAGGCAAGATTACAGATAGTCTTG
AGTGTGTCTTATCTACCGTACCGTACCGTATACCATTGTGTGTTCGGTAG
TGGCGGCTTGTGCGTTCGCTCGATGATGAAAGTCCCTTTGCGCTATTTTG
AGTACTGTATATAGTATAATCGATAACAATAGCAGCCGCGGAATGTGTAG
TAATTGTGTTATCCGGTGTATCCTATGACGCGCCCGGCATGGCGTGGCTA
ACGTACAGAATAGGACTAAATGACTCGCGTAATCTTTGTGGAACGCCGTC
TGACCGGAGACCGGAGAAAACCCGTTATTGCATTACATTATGTGAGAATT
GAATCAATTTCATCATTCCAACCCTACGAACATCCACGCCTTCTTGGCAC
CATAAGAGGTGTAGTCCAGGAGACCAACTATCGTCAGGTTATCATATCAT
GTCATGTTCTATATAATATCGTATTATATCATATTTAATCATATCCTAAT
ATAGGGTTTCCACGAAAAATATACACTTAAGTGAACAGGAACCTAAATTA
GTCTGCCACACTGGCAGACTAGTTTAGGTTCCTTTTCACTTTAGTGCATT
CTTTTCATACACTTTTTATGACACGTGGAAACCCTATAACATCTCATTAT
GTCGCGACTCCATCCCGGCATGATTGGGATGCGGGGTCTATGTCCAATGG
GATACGACACGCCTTTAACATAACTACAAACCCGCCCGCTAAGCTTTATG
CATGAATATATTAATTTCTATTACATGAGATTTGGGAGGTGTTAACAGAT
TAAACATTTATCACAGTTATTGGCGCGTCGTTTCGACCTCCGCGTGTCGT
TTGATAAGAGCCGAAGCCACCAACATTACCAATCGAGAGAGAGAGAGAGA
GAGAGAGAGAAAAAAAAAGCTCAGATGGAGAAAGAAGTAGGATTTTTTCT
TTTTCTTTGGGAGGGCGGTTCCCCCTCGTAGTATGCGAGGGATACAGTCG
AGGGAGACTTAATATAAAGAGGCGTTTCGCGTGAGTATAGTGTCGTTGCC
AATCTCCCTCCGTTTGGTCTCCGAACTCTGGATTTTTTTGTCCTTGTACT
TGTACTTGGCCCTCCCCTCCCGGCCCTCCCCTCCCCGCAAAAACTGTGGT
TCTTTGTAATCGCATCATCTCTTGCTTGGCCGTCCGGTGTTTTCTTTCGC
TCGCCGAAATGCCTCCCCGGTTCCGCCCCCTCTCTCCCTCAGGTGGACAC
GATGATCGTGCAGGCGATCGGTCTGTTGGACGAGCTAGACAAGGAAATCA
ACACGTACGCAATGCGGGTCAAGGAGTGGTACGGCTGGCACTTCCCCGAG
ATGGCGAAGGTGCGCGTGCATTGTTACTGCTACTGCTGCTGCTGCTGCTG
CTGCTGTTGTCACGAAGTCAGTCGTCGTGCTCTGTCCCTTGTGCTCATAG
CTCTAGCGTCGCTTCGATCGATCGATACCCATGACCCTTGCGGTTTCAGG
GCAAATGTGTGTTGGCTTCGTCATAAACGTCCCGCACCGCCCCTCCCCTC
CCCTCCCCTGCCCGAGAAGACATTTCGTGGCCTGCTCTTGCTTTTAGCCC
TTGTTCCTTGGGAGTTGCGCGACTCTTCGGTCGTGTTGGTTGTTTGTTCA
CTCCTGTCGGAAAAAAAGGCGTTCAAAAATCGAAGGCGTGTTTGTGCTTT
TTTGTGTTTGTGTGAGTAGTGTATGTGGCAATGCGGGGCGCCCTTCTTTT
GCGTTTTTTTTCTTCGCAGATCGTGAACGACAACATGCTTTACGCAAAGC
TCGTGGTAAGAATGGGGGTGCGAACAGAGTGCAAGCACTGCGACTTCAGC
GACATCCTCGAAGACGATGACGTGAGATGCCACCCTTCTCTCCCCCGCCT
CCCCCCAATATTTGGAAACCCCTCTAATGAGCCATAGAGACCTTGTACTG
TTGTTGTAATTTGCTTTATCGATGGTGCTGTTTTGAATGAAAATTACATG
TTCACGACTGATTGCTGTAGGCACACGACATTTACCCACAATTTTTGTTT
TTGTTTAGGTCGCCGTACGATCTCGCTGATGTTAGAGTTCGTGGCGAATG
TATACGCTTAACCATCATATAGCATGCAAGGTCATGGATTTTCCATGGGC
GCAAATGCCACTCCCCCTATCTCTGCCGACTTCTTGTTCCGCGGAATCTG
GTTTGGGGGGTGGGGAAGAGGGGGGTCTGGAATGATTGAAAACATTGCGC
CTAAAAACGACCATCTCGCCGGCCGATGGCGCTCTCGAATCCTCCTCTCG
CGTCGCAACCAAAAACGCAACCCACCGTTAAAGCGGGCCATGGACGATGC
GATGCGTCTTGGTATAGTACGTATATTGTATGCCTTAGCTAACGCGAGCA
CGTGTCATCGGTGATTGGTTACAGATGGCCCGCGACCTCAAGGAGGCAGC
GGAAGTGAGCATGGGGACAGAGATCACGATCGTGGACGTGATCACCATCA
AGGCGCTGGCAGACCAG
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Coding sequence (CDS) from alignment at H-elongata_contig61443:184..3400+

>mRNA_H-elongata_contig61443.13698.1 ID=mRNA_H-elongata_contig61443.13698.1|Name=mRNA_H-elongata_contig61443.13698.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1056bp|location=Sequence derived from alignment at H-elongata_contig61443:184..3400+ (Himanthalia elongata Himel1 dioecious)
CAGCTGGCGGTGTCGGACTCGAAGCTCGGCAACGCCATCAAGGAGAAGCT
ATCCATCAAGTGCGTGAACGACTCGGGGGTGATGGAGGTGATGCGTGGCA
TCCGGGGACAGCTGGAGGCCCTCTTGACTTCAGTTGGGGACGAAAATCTT
CGTGCGATGCGCCTGGGCCTGAGCCATTCCTTGTCTCGCTATAAGCTTAA
GTTTTCGGCGGATAAGCAGCTGGCGGTGTCGGACTCGAAGCTCGGCAACG
CCATCAAGGAGAAGCTATCCATCAAGTGCGTGAACGACTCGGGGGTGATG
GAGGTGATGCGTGGCATCCGGGGACAGCTGGAGGCCCTCTTGACTTCAGT
TGGGGACGAAAATCTTCGTGCGATGCGCCTGGGCCTGAGCCATTCCTTGT
CTCGCTATAAGCTTAAGTTTTCGGCGGATAAGGTGGACACGATGATCGTG
CAGGCGATCGGTCTGTTGGACGAGCTAGACAAGGAAATCAACACGTACGC
AATGCGGGTCAAGGAGTGGTACGGCTGGCACTTCCCCGAGATGGCGAAGG
TGGACACGATGATCGTGCAGGCGATCGGTCTGTTGGACGAGCTAGACAAG
GAAATCAACACGTACGCAATGCGGGTCAAGGAGTGGTACGGCTGGCACTT
CCCCGAGATGGCGAAGATCGTGAACGACAACATGCTTTACGCAAAGCTCG
TGGTAAGAATGGGGGTGCGAACAGAGTGCAAGCACTGCGACTTCAGCGAC
ATCCTCGAAGACGATGACATCGTGAACGACAACATGCTTTACGCAAAGCT
CGTGGTAAGAATGGGGGTGCGAACAGAGTGCAAGCACTGCGACTTCAGCG
ACATCCTCGAAGACGATGACATGGCCCGCGACCTCAAGGAGGCAGCGGAA
GTGAGCATGGGGACAGAGATCACGATCGTGGACGTGATCACCATCAAGGC
GCTGGCAGACCAGATGGCCCGCGACCTCAAGGAGGCAGCGGAAGTGAGCA
TGGGGACAGAGATCACGATCGTGGACGTGATCACCATCAAGGCGCTGGCA
GACCAG
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