prot_H-elongata_contig61280.13676.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: A0A2P6RES3_ROSCH (Putative transcription factor WD40-like family n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RES3_ROSCH) HSP 1 Score: 89.0 bits (219), Expect = 6.300e-20 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQASNRDS 65
R+A++W+ E G + T GH RLARI FHPSG+YLGT SFD TWRLWD+E GEELLLQ + S
Sbjct: 90 RTARLWNSE-GAHLMTFGGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGEELLLQEGHSRS 153
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 9.840e-20 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 0
Query: 4 KVWDC--ESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQ 59
KV C +G+C+QTL GHA RLAR+ FHP GRY+GTAS+DHTWRLWD+E G +LLLQ
Sbjct: 294 KVGACVVHAGKCLQTLTGHADRLARVEFHPCGRYVGTASYDHTWRLWDVETGAQLLLQ 351
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: UPI00053B0164 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B0164) HSP 1 Score: 89.7 bits (221), Expect = 1.920e-19 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQ 59
R+AK+W + G VQT +GH RLAR+ FHPSGRYLGT SFD TWRLWDI G ELLLQ
Sbjct: 211 RTAKLWKTD-GTLVQTFEGHLDRLARVAFHPSGRYLGTTSFDKTWRLWDINTGAELLLQ 268
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: A0A6A4LZK8_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LZK8_9ERIC) HSP 1 Score: 86.7 bits (213), Expect = 1.030e-18 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 3 AKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQ 59
A++W+ E G + T +GH RLARI FHPSG+YLGT S+D TWRLWDI+ GEELLLQ
Sbjct: 142 ARLWNTE-GSLLNTFEGHLDRLARIAFHPSGKYLGTTSYDKTWRLWDIDTGEELLLQ 197
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: A0A1Y1HKQ5_KLENI (U4/U6 small nuclear ribonucleoprotein PRP4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKQ5_KLENI) HSP 1 Score: 86.7 bits (213), Expect = 3.060e-18 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQ 59
R+AK+W+ + E V+T GH RLARI FHPSGRYLGTASFD TWRLW +E G E+LLQ
Sbjct: 338 RTAKLWNLKGKE-VRTFSGHLDRLARIAFHPSGRYLGTASFDKTWRLWHLETGVEMLLQ 395
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: D7L994_ARALL (Uncharacterized protein n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=D7L994_ARALL) HSP 1 Score: 85.5 bits (210), Expect = 3.500e-18 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQASNRDS 65
R+AK+W+ + G +QT +GH RLARI FHPSG+YLGT SFD TWRLWDI G E+L Q + S
Sbjct: 105 RTAKLWNID-GTLLQTFKGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDINTGIEILSQGGHSRS 168
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: UPI000A29D665 (LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein PRP4-like protein n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29D665) HSP 1 Score: 85.5 bits (210), Expect = 4.210e-18 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQASNRDS 65
R+AK+W+ + G +QT +GH RLARI FHPSG+YLGT SFD TWRLWDI G E+L Q + S
Sbjct: 126 RTAKLWNID-GTLLQTFKGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDINTGIEILSQGGHSRS 189
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: A0A072V5R5_MEDTR (U4/U6 small nuclear ribonucleoprotein PRP4 n=6 Tax=IRL clade TaxID=2233839 RepID=A0A072V5R5_MEDTR) HSP 1 Score: 85.9 bits (211), Expect = 5.560e-18 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQ 59
R+AK W+ + G + T +GH RLARI FHPSG+YLGTAS+D TWRLWD+E EELLLQ
Sbjct: 337 RTAKYWN-DQGALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWDVETEEELLLQ 394
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: B9SVT1_RICCO (U4/U6 small nuclear ribonucleoprotein Prp4, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9SVT1_RICCO) HSP 1 Score: 85.5 bits (210), Expect = 7.720e-18 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 1 RSAKVWDCESGECVQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQASNRDS 65
R+AK+W+ + G + T GH RLARI FHPSG+YLGT SFD TWRLWD++ G ELLLQ + S
Sbjct: 314 RTAKLWNTD-GLVLGTFHGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVDTGAELLLQEGHSRS 377
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Match: A0A438DKL7_VITVI (U4/U6 small nuclear ribonucleoprotein PRP4-like protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DKL7_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 1.910e-17 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 0
Query: 14 VQTLQGHAGRLARIGFHPSGRYLGTASFDHTWRLWDIERGEELLLQASN 62
++T +GH RLARI FHPSG+YLGTASFD TWRLWD+E GEELLLQ +
Sbjct: 331 LKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGS 379 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61280.13676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig61280.13676.1 ID=prot_H-elongata_contig61280.13676.1|Name=mRNA_H-elongata_contig61280.13676.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bpback to top |