mRNA_H-elongata_contig6113.13659.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6113.13659.1
Unique NamemRNA_H-elongata_contig6113.13659.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: D7FQ04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ04_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 5.050e-121
Identity = 202/365 (55.34%), Postives = 224/365 (61.37%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTG----------------------------------------------------------------------------------------------GSAGAGV-------------RERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            +QRGPAEYDLFLRPDLHTHGHTQWFYFA+RGTHPPGVVG+S I+FN+VNLTKPDSLFAMGMRPV+YSH +A  +GLGWRRCGH I+YRSNGY+W+KPDGS  SFYTLS SVTF + GDTYRLAHAHPYSYSDHKRHLA LL +ER +RYL   + C TLGGN+CDLLT+TD  + PI  TG                                                                                              GS G G              R    K CVVIS+RVHPGETPASWMMRGMLDF+ G+SAEARLLRSLFVFKIVPMLNPDGVA+GNNRC  A
Sbjct:  377 VQRGPAEYDLFLRPDLHTHGHTQWFYFAVRGTHPPGVVGDSVIKFNVVNLTKPDSLFAMGMRPVMYSHKDAEEKGLGWRRCGHGIDYRSNGYSWYKPDGSHASFYTLSLSVTFPNSGDTYRLAHAHPYSYSDHKRHLAGLLENERTSRYLNHTILCKTLGGNDCDLLTVTDPHDTPITATGVVSSRSSSYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTKTNLEKSETTTEPIAAAAPVAGGASQAGAMNGSGGIGGEDVGNGSLGVGAGLGGRYGLGSMVGRRGMNKRCVVISARVHPGETPASWMMRGMLDFLMGDSAEARLLRSLFVFKIVPMLNPDGVAFGNNRCSLA 741          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: A0A6H5KD86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD86_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 9.510e-121
Identity = 203/363 (55.92%), Postives = 223/363 (61.43%), Query Frame = 1
Query:    4 QRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTG---------------------------------------------------------------------------------------------GSAGAGV-------------RERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            QRGPAEYDLFLRPDLHTHGHTQWFYFA+RGTHPPGVVG+S I+FN+VNLTKPDSLFAMGMRPV+YSH +A  +GLGWRRCGH I+YRSNGY+W+KPDGS  SFYTLS SVTF + GDTYRLAHAHPYSYSDHKRHLA LL +E  +RYL   V C TLGGN+CDLLT+TD  + PI  TG                                                                                             GS G G              R    K CVVIS+RVHPGETPASWMMRGMLDF+TG+SAEARLLRSLFVFKIVPMLNPDGVA+GNNRC  A
Sbjct:  593 QRGPAEYDLFLRPDLHTHGHTQWFYFAVRGTHPPGVVGDSVIKFNVVNLTKPDSLFAMGMRPVMYSHKDAEEKGLGWRRCGHGIDYRSNGYSWYKPDGSHASFYTLSLSVTFPNSGDTYRLAHAHPYSYSDHKRHLAGLLENEGTSRYLNHTVLCKTLGGNDCDLLTVTDPHDTPITATGIVSSRSSSYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAGGAAQAGAMNGSGGIGGEDVGSGSLGVGAGLGGRYXXXXXXXRRGMNKRCVVISARVHPGETPASWMMRGMLDFLTGDSAEARLLRSLFVFKIVPMLNPDGVAFGNNRCSLA 955          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: A0A835YLX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX9_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.000e-101
Identity = 154/261 (59.00%), Postives = 185/261 (70.88%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGL---GWRRCGHEINYRSNGYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            +QRGPAEYDLFLRPDLHTHGHTQWFYFAL            ++ FNIVNLTKPDSLF+ GMRPVLYSH+E +   L   GWRRCG  + YRSN      PDGS G+FYTLSF+VTF   GDTYRLAH +PY+ +DH RH+A+++AD  RAR++ +   C TLGG  C+LLTIT+     +    G           KC V +S+RVHPGETPASWM+RG+LD++TG  A A LLR LFVF++VP LNPDGVA+GNNRC  A
Sbjct:   18 VQRGPAEYDLFLRPDLHTHGHTQWFYFALSNRCCALARRPVSVTFNIVNLTKPDSLFSSGMRPVLYSHYERSGDALAAPGWRRCGENVAYRSNA-----PDGSVGAFYTLSFTVTFPWVGDTYRLAHCYPYTLADHARHMARIMADPERARHVARATLCHTLGGTACELLTITEDAAAFLAAADGEENLKCSREEIKC-VTVSARVHPGETPASWMLRGILDYLTGAEAGAALLRRLFVFRVVPFLNPDGVAHGNNRCSLA 272          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: F0YI27_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI27_AURAN)

HSP 1 Score: 279 bits (713), Expect = 6.970e-89
Identity = 138/255 (54.12%), Postives = 175/255 (68.63%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRC 765
            +QRGP EYDLFLR DLHT G TQWFYFA+  TH    +    + FNIVNLTKPDSLF +GM+PV+YS  EA   G+GW R G  + Y++N    H  D    ++YTLSF++ F  P D Y +AH++PY+YSDHK H+A LL   R+ R       C TL  +ECDL+TIT +E     +   +       R  K  +++S+RVHPGETPASWMMRG+L+F+TGES +A++LRSLF+FKIVPMLNPDGV YGNNRC
Sbjct:   18 VQRGPKEYDLFLRADLHTEGFTQWFYFAVTNTHTHAAL----VTFNIVNLTKPDSLFNLGMQPVMYSCAEAVENGIGWVRTGTSVQYQAN----HPVDAGM-TYYTLSFTLAFYRPDDIYLIAHSYPYTYSDHKAHIANLLRSSRKRRVTRHSALCRTLDSHECDLMTITSNENDLRSNECNTTSMPYLTRRKKL-IILSARVHPGETPASWMMRGILEFLTGESNDAKILRSLFIFKIVPMLNPDGVIYGNNRC 262          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: F0YGU2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGU2_AURAN)

HSP 1 Score: 273 bits (698), Expect = 1.420e-86
Identity = 141/264 (53.41%), Postives = 181/264 (68.56%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQG---SFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTIT-DSEERP--IVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            +QRGPAEYDLFLR DLHT G  QWFYF +  T P        +    +NLTKP+SLF  GM+PV+YS  +A   G+GW R G  + YRSN Y  +  + S     ++YTLSF++ F    D Y +AH++PY+YSDHK HLA +L   R+ R +   + CTTL G +CDL+TIT D++E P  IV+   S  + +R + T   V++S+RVHPGETPASWMMRG+LDF+ G+S EAR+LR+LFVFKIVPMLNPDGV YGNNRC  A
Sbjct:   22 VQRGPAEYDLFLRADLHTDGFMQWFYFGITNTCP-----RDHLDSRHMNLTKPESLFNTGMQPVIYSCADAAEHGIGWIRSGSHVEYRSNQYVRNGLNSSTADGATYYTLSFTLAFDRSDDVYLIAHSYPYTYSDHKAHLASMLRSLRKRRIVQHALLCTTLDGQDCDLITITGDADELPPGIVELSSSVPSFLRRKKT---VILSARVHPGETPASWMMRGILDFLVGDSHEARILRALFVFKIVPMLNPDGVLYGNNRCSLA 277          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: K3WJX9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJX9_GLOUD)

HSP 1 Score: 239 bits (611), Expect = 4.260e-73
Identity = 129/275 (46.91%), Postives = 166/275 (60.36%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSN------------------GYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLL--ADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRC 765
            +Q G  EYDLFLR D +T+GH QWFYFA+          +S  RFNIVNL KPDSLF  G++P++YS  +A  +  GW R G EI Y  N                  G     P  S G +YTL+F++ F    DTY +AH++PY++SDH++HLAQ+L  +  R    L   V C TL G  CDLL+I+D               GV+E   +  +VISSRVHPGE  ASWMMRG++DF+ GES  AR+LR LF+F+I+PMLNPDGV YGN+RC
Sbjct:   76 VQIGEYEYDLFLRRDFNTNGHMQWFYFAISNIQIIPGARKSKYRFNIVNLCKPDSLFNQGLQPIVYSVKDAKLKRTGWLRSGSEIYYFENPFPRSPKCTGKVPRNNNDGALEAAPQNSAGKYYTLTFTLEFADAEDTYLIAHSYPYTFSDHQQHLAQILHQSSRRIQTILRHSVLCKTLSGKNCDLLSISDFS------------TGVQELKARKAIVISSRVHPGEPQASWMMRGVIDFLLGESDVARVLRRLFLFQIIPMLNPDGVYYGNSRC 338          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: A0A482S0V5_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0V5_9ARCH)

HSP 1 Score: 236 bits (602), Expect = 2.570e-71
Identity = 132/322 (40.99%), Postives = 175/322 (54.35%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPG---------VVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQ-GSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEER----PIVDTGGSAGAGV--------------------------------------------------RERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            +Q   A+YDL LR D+HT GHTQWFYF +  THPP          V+    ++FNI+N TKPDSLF +GMRPV+YS  E+  RG+GW R G EI+Y  N YT +   G   G +YTLSF++ F H  DT  +A+++PY+ +D+K H+ +++ +      + +   CTTLGG +CDLL ITD +E+    PI     S   G+                                                  R+ A K  + IS RVHPGETPASWMM+G+LDF+   S  A +LR L+V  IVP+LNPDGV  GNNRC  A
Sbjct:   26 IQVSDAQYDLVLRADVHTVGHTQWFYFGVSNTHPPELVKLYDQGVVIPPVRVKFNIINFTKPDSLFNLGMRPVVYSVRESVERGVGWVRSGSEISYYVNNYTRNNNAGEGVGYYYTLSFTMEFTHAKDTVLIAYSYPYTMTDYKAHIEEIMDNHANTHLIKRLKLCTTLGGEDCDLLVITDFKEKEKVGPISLPSMSEWGGLDDSAQNNNFTSATLSAPSSSFIPSNMSTNSNLMSVTGSNKMKTKDKQEKYRQGAYKPALFISGRVHPGETPASWMMKGILDFLVSSSPSATMLRKLYVIFIVPVLNPDGVICGNNRCSLA 347          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: A0A418DPF1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DPF1_9STRA)

HSP 1 Score: 235 bits (599), Expect = 7.300e-70
Identity = 129/266 (48.50%), Postives = 165/266 (62.03%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWH----KPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITD----SEERPIVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            +Q    EYDL LRPDLHT G+TQWFYFA+  T P     + A  F+IVNL KPDSLF  G++PV+YS  +AT R +GW   G  + Y +N Y       +P   Q +F+TLSF++TF H  DT  +AH++PY+  DH+ HLA+     R    + Q V CTTLG   CDLLTITD       RP+V                   V+++RVHPGE  ASW+MRG+LDF+  ++ +A+LLR LFVFK+VPMLNPDGV YGNNRC  A
Sbjct:   68 VQIADTEYDLILRPDLHTQGYTQWFYFAVANTEP-----DVAYTFHIVNLHKPDSLFRTGLQPVVYSVQDATCRAVGWTHAGSNVCYFANPYKQPSPVPRPCTDQLTFFTLSFTLTFPHAHDTTLVAHSYPYTMHDHRWHLARPAL--RCPDVVRQSVLCTTLGQQACDLLTITDFGHVDGRRPVV-------------------VLTARVHPGEPQASWIMRGVLDFLVSDAPDAKLLRRLFVFKVVPMLNPDGVMYGNNRCGLA 307          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: A0A7S0TYR6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TYR6_HEMAN)

HSP 1 Score: 234 bits (598), Expect = 4.220e-69
Identity = 120/255 (47.06%), Postives = 164/255 (64.31%), Query Frame = 1
Query:    1 LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRC 765
            +Q  P+EYDL LRPD++T GHTQW+YF++       V      +FN++NL KPDS++  G+RP++YS  E +  GLGW R G +I Y  N     K  G  G++YTL+F+VTF H  DT  LAH +PY+Y+D + +LA L AD R A  + +RV C TL GN CDLLT+T     P                ++  ++I++RVHPGET ASWM++G +D++TG + +A++LR  FVFKIVPMLNPDGV  GN RC
Sbjct:  240 IQIYPSEYDLILRPDINTRGHTQWYYFSVSN-----VRRGRKYKFNLINLVKPDSVYNQGLRPLIYSEAEQSASGLGWHRTGVDIAYYQNNI---KRKG--GAYYTLTFTVTFPHDNDTCYLAHCYPYTYTDLQNYLASLEADPRVASRIRRRVLCKTLAGNNCDLLTVTSFSSDP------------EAMKSRKGILITARVHPGETQASWMLKGFVDYLTGPTLDAKILRDNFVFKIVPMLNPDGVINGNYRC 472          
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Match: A0A8B9CCC1_9AVES (ATP/GTP binding protein like 2 n=1 Tax=Anser brachyrhynchus TaxID=132585 RepID=A0A8B9CCC1_9AVES)

HSP 1 Score: 231 bits (589), Expect = 1.210e-68
Identity = 124/255 (48.63%), Postives = 158/255 (61.96%), Query Frame = 1
Query:   10 GPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNLTKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGSQGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYLTQRVSCTTLGGNECDLLTITDSEERPIVDTGGSAGAGVRERATKCCVVISSRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAYGNNRCRQA 774
            GP EY L LRPDL+T  HTQWFYF ++ T       ++  RF I NL KP SL+  GMRP+LYS  +A +RG+GWRR G E+ Y   G       G + + + LS+S+ F H GDT  LAH++PY+YSD +R+L  ++ D  R+RY   R  C +L GN   LLTIT          G + GAG R       VV+S+R HPGE+  SW MRG LDF+   + +ARLLR LFVFK+VPMLNPDGV  GN+RC  A
Sbjct:  105 GPYEYVLTLRPDLYTAKHTQWFYFRVQNTRR-----DAVYRFTIANLAKPKSLYGEGMRPLLYSQQDARSRGIGWRRVGAEVRYYRGG------GGEEPATFCLSWSMRFPHDGDTCYLAHSYPYTYSDLQRYLRAVVGDPVRSRYCAVRALCRSLAGNTVYLLTIT----------GPAGGAGKR------AVVLSARAHPGESGGSWAMRGFLDFVLSAAPDARLLRRLFVFKVVPMLNPDGVVVGNSRCSLA 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6113.13659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ04_ECTSI5.050e-12155.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD86_9PHAE9.510e-12155.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLX9_9STRA2.000e-10159.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YI27_AURAN6.970e-8954.12Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
F0YGU2_AURAN1.420e-8653.41Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
K3WJX9_GLOUD4.260e-7346.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A482S0V5_9ARCH2.570e-7140.99Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A418DPF1_9STRA7.300e-7048.50Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S0TYR6_HEMAN4.220e-6947.06Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8B9CCC1_9AVES1.210e-6848.63ATP/GTP binding protein like 2 n=1 Tax=Anser brach... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6113contigH-elongata_contig6113:8996..10883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score387.9
Seed ortholog evalue3.9e-105
Seed eggNOG ortholog2880.D7FQ04
Preferred nameAGTPBP1
GOsGO:0000003,GO:0001505,GO:0001654,GO:0001754,GO:0001775,GO:0002376,GO:0002520,GO:0002521,GO:0003008,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0007005,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007610,GO:0007626,GO:0007628,GO:0008092,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008344,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009987,GO:0015631,GO:0016043,GO:0016787,GO:0018193,GO:0018200,GO:0018410,GO:0018991,GO:0019098,GO:0019538,GO:0021533,GO:0021537,GO:0021549,GO:0021575,GO:0021587,GO:0021680,GO:0021692,GO:0021694,GO:0021695,GO:0021696,GO:0021697,GO:0021702,GO:0021772,GO:0021953,GO:0021988,GO:0022008,GO:0022037,GO:0022414,GO:0030097,GO:0030098,GO:0030154,GO:0030182,GO:0030217,GO:0030534,GO:0030900,GO:0030902,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0033077,GO:0035608,GO:0035609,GO:0035610,GO:0036211,GO:0042110,GO:0042133,GO:0043009,GO:0043010,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045321,GO:0046530,GO:0046649,GO:0048513,GO:0048534,GO:0048592,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050877,GO:0050905,GO:0060041,GO:0060322,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0071704,GO:0071840,GO:0090596,GO:0090659,GO:0140096,GO:1901564
EggNOG free text desc.protein deglutamylation
EggNOG OGsCOG2866@1,KOG3641@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase M14, carboxypeptidase A
Ec32 orthologEc-01_007980.1
Exons5
Model size801
Cds size801
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6113.13659.1prot_H-elongata_contig6113.13659.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6113 8996..10883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930986.3259573-CDS-H-elongata_contig6113:8995..91011622930986.3259573-CDS-H-elongata_contig6113:8995..9101Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 8996..9101 +
1691679651.590706-CDS-H-elongata_contig6113:8995..91011691679651.590706-CDS-H-elongata_contig6113:8995..9101Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 8996..9101 +
1622930986.3450274-CDS-H-elongata_contig6113:9359..95191622930986.3450274-CDS-H-elongata_contig6113:9359..9519Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 9360..9519 +
1691679651.6054509-CDS-H-elongata_contig6113:9359..95191691679651.6054509-CDS-H-elongata_contig6113:9359..9519Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 9360..9519 +
1622930986.3625436-CDS-H-elongata_contig6113:9799..99761622930986.3625436-CDS-H-elongata_contig6113:9799..9976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 9800..9976 +
1691679651.615987-CDS-H-elongata_contig6113:9799..99761691679651.615987-CDS-H-elongata_contig6113:9799..9976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 9800..9976 +
1622930986.3836145-CDS-H-elongata_contig6113:10288..104151622930986.3836145-CDS-H-elongata_contig6113:10288..10415Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 10289..10415 +
1691679651.6297534-CDS-H-elongata_contig6113:10288..104151691679651.6297534-CDS-H-elongata_contig6113:10288..10415Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 10289..10415 +
1622930986.4053504-CDS-H-elongata_contig6113:10652..108831622930986.4053504-CDS-H-elongata_contig6113:10652..10883Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 10653..10883 +
1691679651.646144-CDS-H-elongata_contig6113:10652..108831691679651.646144-CDS-H-elongata_contig6113:10652..10883Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6113 10653..10883 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6113.13659.1

>prot_H-elongata_contig6113.13659.1 ID=prot_H-elongata_contig6113.13659.1|Name=mRNA_H-elongata_contig6113.13659.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp
LQRGPAEYDLFLRPDLHTHGHTQWFYFALRGTHPPGVVGESAIRFNIVNL
TKPDSLFAMGMRPVLYSHHEATTRGLGWRRCGHEINYRSNGYTWHKPDGS
QGSFYTLSFSVTFLHPGDTYRLAHAHPYSYSDHKRHLAQLLADERRARYL
TQRVSCTTLGGNECDLLTITDSEERPIVDTGGSAGAGVRERATKCCVVIS
SRVHPGETPASWMMRGMLDFITGESAEARLLRSLFVFKIVPMLNPDGVAY
GNNRCRQACLACSTCGG
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mRNA from alignment at H-elongata_contig6113:8996..10883+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6113.13659.1 ID=mRNA_H-elongata_contig6113.13659.1|Name=mRNA_H-elongata_contig6113.13659.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1888bp|location=Sequence derived from alignment at H-elongata_contig6113:8996..10883+ (Himanthalia elongata Himel1 dioecious)
CTGCAGAGGGGACCAGCGGAATACGACCTGTTCCTTCGGCCGGACCTCCA CACACATGGACACACACAGTGGTTCTATTTCGCCCTTCGAGGCACGCATC CGCCGGGTGAGAGTATATTACCCGCGTTTCTCATTCTCTACAGTAACAGA CTACGGTGCCGGGTCATTTTGCCTCATAGCAACGGAATTTAATCGATCTT GTTTAGGGCTTCCAATGTCTGCCAAACGCTTCTCGAACAATAAAGCTTCC AAGGACATGGGCTTCACTTTATTCGACTCAAGCGCTGTCGAGCTCAGACC GCTTCTTTCTTATTGTTTCTTGGGGTGTGGGTTGTTTCTGGTCCTCCCTC TTTGTCTATCTTAGGTGTGGTGGGCGAGTCGGCGATAAGGTTTAACATCG TAAATCTTACCAAGCCGGATAGCCTCTTCGCAATGGGCATGCGCCCAGTG CTATACTCTCATCACGAGGCGACAACGCGAGGGCTAGGATGGCGGCGTTG TGGTCATGAAATCAACTATCGGAGGTTACGATGCCTTTTTACGTAGCTTG TAAAGCGCACTGTCGACAACTTCTGAGAAGTAATAAAAGGATGAGTCCAC AATAATTACATCAACGTGATTTTGTTGCTGCTACCGGCAAAGTAGTCTGT CGACACATGAAAAAGTATATCAACAAGCAGCAGAAAAAACGAGCACCTCT TCCGGGCAACAACCAAGTCCCCGCATAAGTTATTGGTGGAGAGTAATGAC CCCTTGCCTCGTCTCTTTTATCGGTAACGCCACACGCACCTTTGTAACTT GCAGCAACGGGTACACATGGCACAAGCCCGATGGTTCGCAGGGCAGCTTC TACACCCTATCGTTCTCCGTGACGTTTCTACACCCAGGGGATACGTATCG ACTTGCTCACGCTCACCCGTACTCGTACTCAGACCACAAGCGACACCTTG CCCAGCTCTTGGCTGACGAGCGAAGGGCGAGGTAGGAGTGGGGGGTTGTG CGGTGAGGGTGAGAGTGAAAGAGTCCGACCTAGAGTCAAAATCCTGGGGG GCTTTGGGGCGTGGCAGCAAAACATATATCGTTTGGATGAGCTGGCGTGG TATTTCCGCTCTGCGCGGTGGCCACTTCAGAAGAGGAACTTTGGAACTTT GGAATGTTTGCACTGTGCAGTTTAGGGTGTTCTCGACTAGCTTTATTTCG TAAGAGTTATCACGGCTAGTCATATTTCCCTAACACCATGCCCCATTCAT AGGCGTACAGAAGCACATCCCTCTCACCAACACCCCTTGGCAGGTACCTC ACCCAAAGGGTCTCGTGCACCACCCTGGGTGGAAACGAGTGTGATCTTCT CACGATCACTGACTCCGAGGAAAGGCCCATCGTCGACACAGGAGGCAGTG CGGGCGCTGGCGTACGCGAAGTTGGACCCGCTGTTTCCAGTTCAGCGGCA GACCCACCCCGAAGCGTCAATGGAGCTAGCCATAACTTCGAGGGGTCGGC AACGGTGCAAAGTTGCTGTGGTCCAATCGCAAGAGGGCTTACGGTGACGG GAAGATCAAAGGATGAGCGAGGAACTGCCAGCGTCCGCGAACTCGGGAGT GTGAGCGTCGGAGGGCGAGTAGGTAGCGGTAGCGGTAGCTGTGGCAACAA TGCGAAGCGTGCGACCAAGTGTTGCGTGGTCATCAGCTCGCGGGTACACC CGGGAGAAACGCCGGCAAGCTGGATGATGCGCGGTATGCTGGATTTCATT ACCGGGGAGAGCGCTGAGGCGAGGCTGCTTCGATCCCTATTTGTATTCAA GATCGTCCCTATGCTTAACCCGGATGGGGTCGCGTATGGGAATAACCGGT GCAGGCAAGCGTGCTTAGCATGTAGTACATGCGGTGGT
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Coding sequence (CDS) from alignment at H-elongata_contig6113:8996..10883+

>mRNA_H-elongata_contig6113.13659.1 ID=mRNA_H-elongata_contig6113.13659.1|Name=mRNA_H-elongata_contig6113.13659.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1602bp|location=Sequence derived from alignment at H-elongata_contig6113:8996..10883+ (Himanthalia elongata Himel1 dioecious)
CTGCAGAGGGGACCAGCGGAATACGACCTGTTCCTTCGGCCGGACCTCCA
CACACATGGACACACACAGTGGTTCTATTTCGCCCTTCGAGGCACGCATC
CGCCGGCTGCAGAGGGGACCAGCGGAATACGACCTGTTCCTTCGGCCGGA
CCTCCACACACATGGACACACACAGTGGTTCTATTTCGCCCTTCGAGGCA
CGCATCCGCCGGGTGTGGTGGGCGAGTCGGCGATAAGGTTTAACATCGTA
AATCTTACCAAGCCGGATAGCCTCTTCGCAATGGGCATGCGCCCAGTGCT
ATACTCTCATCACGAGGCGACAACGCGAGGGCTAGGATGGCGGCGTTGTG
GTCATGAAATCAACTATCGGAGGTGTGGTGGGCGAGTCGGCGATAAGGTT
TAACATCGTAAATCTTACCAAGCCGGATAGCCTCTTCGCAATGGGCATGC
GCCCAGTGCTATACTCTCATCACGAGGCGACAACGCGAGGGCTAGGATGG
CGGCGTTGTGGTCATGAAATCAACTATCGGAGCAACGGGTACACATGGCA
CAAGCCCGATGGTTCGCAGGGCAGCTTCTACACCCTATCGTTCTCCGTGA
CGTTTCTACACCCAGGGGATACGTATCGACTTGCTCACGCTCACCCGTAC
TCGTACTCAGACCACAAGCGACACCTTGCCCAGCTCTTGGCTGACGAGCG
AAGGGCGAGCAACGGGTACACATGGCACAAGCCCGATGGTTCGCAGGGCA
GCTTCTACACCCTATCGTTCTCCGTGACGTTTCTACACCCAGGGGATACG
TATCGACTTGCTCACGCTCACCCGTACTCGTACTCAGACCACAAGCGACA
CCTTGCCCAGCTCTTGGCTGACGAGCGAAGGGCGAGGTACCTCACCCAAA
GGGTCTCGTGCACCACCCTGGGTGGAAACGAGTGTGATCTTCTCACGATC
ACTGACTCCGAGGAAAGGCCCATCGTCGACACAGGAGGCAGTGCGGGCGC
TGGCGTACGCGAAGTACCTCACCCAAAGGGTCTCGTGCACCACCCTGGGT
GGAAACGAGTGTGATCTTCTCACGATCACTGACTCCGAGGAAAGGCCCAT
CGTCGACACAGGAGGCAGTGCGGGCGCTGGCGTACGCGAACGTGCGACCA
AGTGTTGCGTGGTCATCAGCTCGCGGGTACACCCGGGAGAAACGCCGGCA
AGCTGGATGATGCGCGGTATGCTGGATTTCATTACCGGGGAGAGCGCTGA
GGCGAGGCTGCTTCGATCCCTATTTGTATTCAAGATCGTCCCTATGCTTA
ACCCGGATGGGGTCGCGTATGGGAATAACCGGTGCAGGCAAGCGTGCTTA
GCATGTAGTACATGCGGTGGTCGTGCGACCAAGTGTTGCGTGGTCATCAG
CTCGCGGGTACACCCGGGAGAAACGCCGGCAAGCTGGATGATGCGCGGTA
TGCTGGATTTCATTACCGGGGAGAGCGCTGAGGCGAGGCTGCTTCGATCC
CTATTTGTATTCAAGATCGTCCCTATGCTTAACCCGGATGGGGTCGCGTA
TGGGAATAACCGGTGCAGGCAAGCGTGCTTAGCATGTAGTACATGCGGTG
GT
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