prot_H-elongata_contig6024.13560.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6024.13560.1 vs. uniprot
Match: A0A6H5J8H1_9PHAE (Structure-specific endonuclease subunit SLX4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H1_9PHAE) HSP 1 Score: 202 bits (514), Expect = 3.940e-49 Identity = 341/1214 (28.09%), Postives = 471/1214 (38.80%), Query Frame = 0
Query: 10 AKEPKTEFQADIQMAKALSKSLVV-SARGVGNRTEEELQDEEELARDPAAFQAKEKRLVATLKDLDQKLERLQKDREMALKKLATHRALGARTSADSKHCSM---------APKTATEVVDLLFAEEQDR--------------------RVCVPGKEPRRGEKRKTLSPIAVDSLEAMSAGRSIAPEQDG-TDLSS----VLLPQATK---------PMCGRNEDGSD-------------------GSSSVGGG---DGDIDGHGDSA--------GVPKLTRRRSGSGRIRRDGQGHVSSS--------RDKTMWSIARDADWLSQSSFVTGAFADIRVEAAAKKEARARESQEARSAVGQGA----------QTSSVTASAYGDPSLYNRRPAGSDAGTAGAPRRSTPGSIDIGRRGPCSDSEDAD----------STRRQRPRLWRGNDDCGVELDSEFDERDAMADDAVLLLTQILSEGHA--VPRRPNKGVTNVSLEKAAASLASNSTAEKIAERHIARAPVAVVSQLFHDWEENVRYVFRQGADELRGALESINAALSEEEMAVIAAVASRNSESLDGEIAEGKCPTLEAGPTHEGAGGEKAKALLFFKGVILDALEMKAALEVDLGSENDFSEVKDIRADVIERGTDVRDEG------DLASVRGRRIAGRALGFADDKLPGEISGGDVSCRNGSNS--QSSWSRNIPNV-GMAKEDGDADKEG-------GDAGDILGQAKGEAQNVEDGSYALGKNN---------------STSLAAPSPTSSTKSITTIILSGDSSRDAIVTFDLTTS------------------------------GEREATVATEAGSDALTPSSTVESQHCD--------------------------------------GVKVE-----------------------------GGKMSAAADGGNISADAGD--DGVAVRFDSFWDD----------PLAF-PSPPYDDGGVADDWH-----------------------------APLPSSSPATAENGPSILETARWRLIQSP-IAEMNEPREQGACSFGL-------TGTLSDAPTRPPHATAPSEPPTKSLRPMRSCSQPVSPRPEPEPETGTLLSAGGSSRGPD--EAVPLFNKMTQQELTGMMSVYGLKKKSKKEMVTRLEQIWSALHPVASSADVAAAG 939
AK PKTE+Q +QMA+ALSKSLV A V + EE+ +E LAR+PAAF+AKE+RLV LKDLD KLERL+KDR+ AL+KLA HR LGAR SA + APKTA EVVD++FA+E R+ G+ +RG + SP + + +S G ++A G +D +S +P+ ++ P+ EDG+ G+ G DGD GD GV +L RRRSG G +G G S+ R +T+W+IA+ AD LSQS FVTG FADIR + VG GA + ++VTA+AYGD LYNRR S A + A + CSD D D S R Q +D+ G S D DA+ DD + LL+Q LS+ AE+ A RHIARAPV+ +S LF +W+ENV +VFRQGA EL+ AL+ I ALSEEE ++A+AL+FF+GVIL+ALE + + + + R RD+G ++ S + R +G + G D R G+NS S ++ P G + DG + G G++GD L A EA +E+ +NN + + + P S+ I+LSGDS+ A+VTFDLT+S G E V + G T +++ GV + + G S D+ D D A+ + +DD L+F PSP D GVAD+ A S +T+ G +L+ + + SP + E + A + + G S A R H PS PP + E + + GG+ + E +P F +MT QEL GMM+VYGLKKKSK+EM RLE IW LHP A+ ++AAG
Sbjct: 302 AKTPKTEYQEHMQMARALSKSLVAPKATAVQDEASEEVCTKE-LARNPAAFRAKERRLVGVLKDLDVKLERLKKDRDSALRKLAAHRTLGARLSAGAGGVPSESSGXXXXGAPKTAEEVVDIIFADEHGAAAAAAGIGSGARTPLRVSTSRLSEEGRAQQRGATLLSSSPSSSSPVSLLSKGTAVADAAGGGSDAASGERPTTVPRRSRRERAKGTPAPLPAPEEDGASXXXXXXXXXXXXXFVAGARGTPPSGDNPRYDGDKGCWGDDXXXXXXXXXGVGRLIRRRSGGGA---NGNGQRSTPGGDGSRARRGRTLWAIAQGADELSQSDFVTGVFADIRANSTG--------------GVGGGAGGKPHAAKPGRRAAVTAAAYGDARLYNRRVVSSAAASPSALSSTL-----------CSDQGDTDEGMGGGRPGKSEREQSASQLNPSDENGG---SGXDGDDAV-DDVIQLLSQTLSQASVSGXXXXXXXXXXXXXXXXXXXXXXXXXXAERFAARHIARAPVSSLSGLFPNWKENVGFVFRQGAAELQEALQGIVTALSEEEE-------------------------------------KEAEALVFFEGVILEALEARGP-----ACSRQLAFLGEERR---------RDDGSHSPGFEVGSPQTWRRGSEGVGIGRNGGGAVTPGSDSPPRGGANSVQDSGFALEGPEERGSERYDGGGSENGEGQARVDGESGDHLSVAD-EATGLEETHATTAENNGHDAEPAAVGTDDGDAGTQSVGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSESSKRCSSAGDIXXXXXXXXXXXXXXXXAAGLAEFPVGADGGGRNSGRGVTARARNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRKSHRGVTASVRNCQRKXXXXXXVXXXXXXXXXXXXXXGANGPDSTDERGEASGDSDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDID--GVADERQPXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADKVSHDSTSAMGAELLDLTQVAPLPSPSLRRCRESLDAAAATSPIGRGRSQHRGLESPATARRRHHCTPSSPPVEG-----------------EEGASSPTAVGGNEDIAELREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIWKTLHPAAAEEGMSAAG 1411
BLAST of mRNA_H-elongata_contig6024.13560.1 vs. uniprot
Match: D8LCH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH0_ECTSI) HSP 1 Score: 137 bits (346), Expect = 3.400e-29 Identity = 220/762 (28.87%), Postives = 294/762 (38.58%), Query Frame = 0
Query: 10 AKEPKTEFQADIQMAKALSKSLVV-SARGVGNRTEEELQDEEELARDPAAFQAKEKRLVATLKDLDQKLERLQKDREMALKKLATHRALGARTSADSKHCSMAPKTATEVVDLLFAEEQDRRVCVPGKEPRRGEKRKTLSPIAVDSLEAMSAGRSIAPEQDGTDLSSVLLPQATKPMC---------------------------------GRNEDGSDGSSSVGGGDGDIDGHGDSAGVPKLTRRRSGSGRIRRDGQGHVSSSRDKTMWSIARDADWLSQSSFVTGAFADIRVEAAAKKEARARESQEARSAVGQGAQTSSVTASAYGDPSLYNRRPAGSDAGTAGAPRR---STPGSIDIGRRGPCSDSEDAD----------STRRQRPRLWRGNDDCGVELDSEFDERDAMADDAVLLLTQILSEGHAVPRRPNKGVTNVSLEKAAASLASNSTAEKIAERHIARAPVAVVSQLFHDWEENVRYVFRQGADELRGALESINAALSEEEMAVIAAVASRNSESLDGEIAEGKCPTLEAGPTHEGAG----GEKAKALLFFKGVILDALEMKAAL----EVDLGSENDFSEVKDIRADVIERGTDVRDEGDLASVRGRRIAGRALGFADDKLPGEIS---GG--------------DVSCRNGSNSQSSWSRNIPNVGMAKEDGD----ADKEGGDAGDILGQAKGEAQNVEDGSYALGKNNSTSLAAPSPTSSTKSITTIILSGDSSRDAIVTFDLTTS 695
AK PKTE+Q +QMA+ALSKSLV A V + EEELAR+PAAF+AKE+RLV LKDLD KLERL+KDR+ AL+K T R G N++G S GGDG R+RR +T+W+IA+ AD LSQS+FVTG FADI+ + A +A + + ++VTA+AYGD LYNRR S A +A A S G ID R +D+ D D S R Q +D+ G D DA+ DDA+ LL+Q LS+ R + E + AE+ A RHIARAPV+ +S LF +W+ENV +VFRQGA ELR AL+ I AALSE AGP +G KA+AL+FF+GV+L+ALE++ LG E+ + R+ E G+ RG G + D PG S GG + S R + + + G EDGD AD+ G A+ + + E + ++ + P S+ I+LSGDS+ A+VTFDLT+S
Sbjct: 39 AKTPKTEYQEHMQMARALSKSLVAPKATAVQDEA-----SEEELARNPAAFRAKERRLVGVLKDLDVKLERLKKDRDSALRKRGTQRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLXXXXXXGGANDNG---QRSTPGGDGS---------------------RVRRG----------RTLWAIAQGADELSQSNFVTGVFADIKANSIGSVGGGAGGKPQA----AKPGRRAAVTAAAYGDARLYNRRVGSSAAASASALSSTLCSNRGGIDAATR--SADAADTDKGMGGGRPGKSEREQSVSQLNPSDENGG---GGGDGNDAV-DDAIQLLSQTLSQASVSGRGGTASAQDGGQENSGKK--QEEEAERSAARHIARAPVSALSGLFPNWKENVIFVFRQGAAELRLALQGIVAALSEXXXXXX----------XXXXXXXXXXXXXXAGPEGRPSGVRRRSRKAEALVFFEGVVLEALELRGPACSRRSASLGEESGREDGS--RSPGFEAGSR------QTLHRGSEGVGDGITSGDAATPGSDSPPRGGASSVQDNVFALEEQEESARKRDDGAGASEGGVGQAGGDGEDGDHLSVADEAMGFEETHAATAENDGHDAEPAAVGADDGDAGMRSVGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSS 731 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6024.13560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6024.13560.1 ID=prot_H-elongata_contig6024.13560.1|Name=mRNA_H-elongata_contig6024.13560.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1086bpback to top |