prot_H-elongata_contig59426.13457.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59426.13457.1
Unique Nameprot_H-elongata_contig59426.13457.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.460e-83
Identity = 120/142 (84.51%), Postives = 134/142 (94.37%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 142
            N AGVATIAP+LEA+VEDWDWTMNVNVRAPFI++ ECA+RMIARG GGKIVS SSTAS+FALHDH++Y TSKAAI GLT+VM+AEWSK+DI CNTVGPTIVLTDMG+KAWG+P KGDPMIDRTPLGRFAEPWEMAHGVV+LV
Sbjct:  109 NNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLV 250          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 9.470e-83
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 142
            N AGVATIAP+LEAT+EDWDWTMNVNVRAPFI++ ECA+RMIARG GGKIV+ SSTAS FALHDH++Y TSKAAINGLT+VM+AEWSKHDI CNT+GPTIVLTDM +KAWG P KGDPM+DRTPLGRFAEPWEMAHGVV+LV
Sbjct:   91 NNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLV 232          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 7.480e-68
Identity = 118/209 (56.46%), Postives = 133/209 (63.64%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNV------------------------------------------NVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLT-------------------------RVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 142
            N AGVATIAP+LEAT+EDWDWTMNV                                          NVRAPFI++ ECA+RMI RG GGKIV+ SSTAS FALHDH++Y TSKAAINGLT                         +VM+AEWSKHDI CNT+GPTIVLTDMG+KAWG+P KGDPM+DRTPLGRFAEPWEMAHGVV+LV
Sbjct:  238 NNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLV 446          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: UPI001420F864 (glucose 1-dehydrogenase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001420F864)

HSP 1 Score: 163 bits (413), Expect = 1.140e-47
Identity = 80/141 (56.74%), Postives = 102/141 (72.34%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 141
            N AGVA IAPLLEA VEDWD TM +N+RAPF+L    A  MIA+G G KI++VSS A + AL DH +Y  SK  +N LTR M  EW+KH++Q N + PTI++T MG + WGDP KG PM+++TPLGRF EP E+A   ++L
Sbjct:  104 NCAGVALIAPLLEAGVEDWDRTMAINLRAPFLLGQALAPGMIAQGAG-KIINVSSQAGVIALDDHGAYSASKGGLNALTRAMMVEWAKHNVQVNVICPTIIMTPMGRQVWGDPDKGQPMLEKTPLGRFGEPVEVADLALYL 243          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH)

HSP 1 Score: 161 bits (407), Expect = 7.170e-47
Identity = 78/141 (55.32%), Postives = 106/141 (75.18%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 141
            N AG+A I  LLEA+++DWD TM VN+RAPF+L+ E A +MIA+   GKI+++SS A I A+  H++Y  SK  +N LT+VM  EW++H+IQ N + PTI+LT MG + WGDPAKG PM+DRTPLGRF +P E+A  V++L
Sbjct:   95 NNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYL 234          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A812TZN2_SYMMI (UgpC protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TZN2_SYMMI)

HSP 1 Score: 165 bits (418), Expect = 1.250e-44
Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 141
            N AGVA +AP+L+A+VEDWD TM +N+RAPF+L    A  MIA+G GGKI+++SS   + AL DH++Y TSK  +N LT+ M  EW+ H+IQ N + PTI+LT MG + WGDPAKG PM+D+TPLGRF EP E+A   +++
Sbjct:  991 NNAGVALVAPILDASVEDWDRTMAINLRAPFLLGKAFAPGMIAQG-GGKIINISSQTGVIALPDHAAYATSKGGLNALTKSMMVEWAPHNIQVNAICPTIILTPMGREVWGDPAKGQPMLDKTPLGRFGEPVEVADLALYM 1130          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.680e-43
Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 141
            N AGVA + PL E  VE WD  M VN RAPF+++  CA  MI +   GKI+++SS A    + DH++Y  SKAAI+ LTRVM  EW+KH+IQ N++GPT+V+T+MG + WG  A G+PM  RTP+GRFAEP E+A+ VV+L
Sbjct:  100 NNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYL 238          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT)

HSP 1 Score: 151 bits (382), Expect = 4.810e-43
Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 141
            N AG+  +  L EAT++ WD TM +N+RAPF+L+ E A RMI +G+G KIVS+SS A +  L +H +Y  SK  +  L  VM AEWS+H+IQ N + PT+V+TDMG + W DPAK  PM+DR P+GRF EP E+A   +FL
Sbjct:   95 NNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFL 234          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A7W1S252_9CHLR (Glucose 1-dehydrogenase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7W1S252_9CHLR)

HSP 1 Score: 150 bits (378), Expect = 1.120e-42
Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 142
            N AG+A +AP LE TV+D+D T+ VN+RA  I+    A+ M+ARG GG IV+VSS A + A+++H++Y  SKA ++ LTRVMA E   H I+ N+V PT++LT MG K WG+PAKGDPM  R PLGRF  P  +A  V +L+
Sbjct:   79 NNAGIALLAPFLEVTVQDFDDTIAVNLRAALIIGQVVAKGMVARGKGGAIVNVSSQAGVAAVYEHAAYCASKAGLDHLTRVMALELGPHQIRVNSVNPTVILTPMGEKVWGEPAKGDPMRARIPLGRFGYPIHVAQAVAYLL 220          
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: UPI001F1AC034 (glucose 1-dehydrogenase n=1 Tax=Acuticoccus sp. M5D2P5 TaxID=2910977 RepID=UPI001F1AC034)

HSP 1 Score: 150 bits (379), Expect = 1.190e-42
Identity = 76/141 (53.90%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 141
            N AGVA IAP LE T EDWD +M VNVRAPF+LS   A  MIA+ +G KIV++SS   + AL DH++Y +SK A+N LT+ + AEW++H+IQ N + PT+VLT MG + WG+  K  PMI+ TPL RF EP E+A   ++L
Sbjct:   95 NNAGVARIAPALELTAEDWDLSMAVNVRAPFLLSRALAPAMIAQRSG-KIVNISSQTGVIALDDHAAYASSKGALNALTKSLMAEWARHNIQVNAICPTVVLTPMGKEVWGEEDKSRPMIEATPLRRFGEPVEIADCALYL 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8H1_ECTSI1.460e-8384.51Similar to L-xylulose reductase (XR) (Dicarbonyl/L... [more]
D7G8H0_ECTSI9.470e-8383.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWZ3_9PHAE7.480e-6856.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001420F8641.140e-4756.74glucose 1-dehydrogenase n=1 Tax=Pelagibius litoral... [more]
A0A6G6X370_9HYPH7.170e-4755.32Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteri... [more]
A0A812TZN2_SYMMI1.250e-4455.32UgpC protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A835YTK4_9STRA4.680e-4353.90Putative short-chain dehydrogenase n=1 Tax=Tribone... [more]
A0A518B898_9BACT4.810e-4351.772-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 ... [more]
A0A7W1S252_9CHLR1.120e-4252.11Glucose 1-dehydrogenase n=1 Tax=Anaerolineae bacte... [more]
UPI001F1AC0341.190e-4253.90glucose 1-dehydrogenase n=1 Tax=Acuticoccus sp. M5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 89..106
score: 32.04
coord: 124..142
score: 34.18
coord: 42..58
score: 29.83
coord: 68..87
score: 37.16
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 1..142
e-value: 7.1E-30
score: 104.3
NoneNo IPR availableGENE3D3.40.50.720coord: 1..142
e-value: 4.7E-42
score: 145.9
NoneNo IPR availablePANTHERPTHR44252FAMILY NOT NAMEDcoord: 1..141
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 55..83
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59426contigH-elongata_contig59426:868..2444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59426.13457.1mRNA_H-elongata_contig59426.13457.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59426 868..2444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59426.13457.1 ID=prot_H-elongata_contig59426.13457.1|Name=mRNA_H-elongata_contig59426.13457.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKI
VSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTI
VLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf