mRNA_H-elongata_contig59426.13457.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 255 bits (651), Expect = 1.460e-83 Identity = 120/142 (84.51%), Postives = 134/142 (94.37%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 426
N AGVATIAP+LEA+VEDWDWTMNVNVRAPFI++ ECA+RMIARG GGKIVS SSTAS+FALHDH++Y TSKAAI GLT+VM+AEWSK+DI CNTVGPTIVLTDMG+KAWG+P KGDPMIDRTPLGRFAEPWEMAHGVV+LV
Sbjct: 109 NNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLV 250
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 252 bits (644), Expect = 9.470e-83 Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 426
N AGVATIAP+LEAT+EDWDWTMNVNVRAPFI++ ECA+RMIARG GGKIV+ SSTAS FALHDH++Y TSKAAINGLT+VM+AEWSKHDI CNT+GPTIVLTDM +KAWG P KGDPM+DRTPLGRFAEPWEMAHGVV+LV
Sbjct: 91 NNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLV 232
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE) HSP 1 Score: 196 bits (497), Expect = 5.140e-58 Identity = 97/145 (66.90%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 67 MNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLT-------------------------RVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 426
+ VNVRAPFI++ ECA+RMI RG GGKIV+ SSTAS FALHDH++Y TSKAAINGLT +VM+AEWSKHDI CNT+GPTIVLTDMG+KAWG+P KGDPM+DRTPLGRFAEPWEMAHGVV+LV
Sbjct: 302 VKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLV 446
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: UPI001420F864 (glucose 1-dehydrogenase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001420F864) HSP 1 Score: 163 bits (413), Expect = 1.140e-47 Identity = 80/141 (56.74%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 423
N AGVA IAPLLEA VEDWD TM +N+RAPF+L A MIA+G G KI++VSS A + AL DH +Y SK +N LTR M EW+KH++Q N + PTI++T MG + WGDP KG PM+++TPLGRF EP E+A ++L
Sbjct: 104 NCAGVALIAPLLEAGVEDWDRTMAINLRAPFLLGQALAPGMIAQGAG-KIINVSSQAGVIALDDHGAYSASKGGLNALTRAMMVEWAKHNVQVNVICPTIIMTPMGRQVWGDPDKGQPMLEKTPLGRFGEPVEVADLALYL 243
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH) HSP 1 Score: 161 bits (407), Expect = 7.170e-47 Identity = 78/141 (55.32%), Postives = 106/141 (75.18%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 423
N AG+A I LLEA+++DWD TM VN+RAPF+L+ E A +MIA+ GKI+++SS A I A+ H++Y SK +N LT+VM EW++H+IQ N + PTI+LT MG + WGDPAKG PM+DRTPLGRF +P E+A V++L
Sbjct: 95 NNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYL 234
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A812TZN2_SYMMI (UgpC protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TZN2_SYMMI) HSP 1 Score: 165 bits (418), Expect = 1.250e-44 Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 423
N AGVA +AP+L+A+VEDWD TM +N+RAPF+L A MIA+G GGKI+++SS + AL DH++Y TSK +N LT+ M EW+ H+IQ N + PTI+LT MG + WGDPAKG PM+D+TPLGRF EP E+A +++
Sbjct: 991 NNAGVALVAPILDASVEDWDRTMAINLRAPFLLGKAFAPGMIAQG-GGKIINISSQTGVIALPDHAAYATSKGGLNALTKSMMVEWAPHNIQVNAICPTIILTPMGREVWGDPAKGQPMLDKTPLGRFGEPVEVADLALYM 1130
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 151 bits (382), Expect = 4.680e-43 Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 423
N AGVA + PL E VE WD M VN RAPF+++ CA MI + GKI+++SS A + DH++Y SKAAI+ LTRVM EW+KH+IQ N++GPT+V+T+MG + WG A G+PM RTP+GRFAEP E+A+ VV+L
Sbjct: 100 NNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYL 238
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT) HSP 1 Score: 151 bits (382), Expect = 4.810e-43 Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 423
N AG+ + L EAT++ WD TM +N+RAPF+L+ E A RMI +G+G KIVS+SS A + L +H +Y SK + L VM AEWS+H+IQ N + PT+V+TDMG + W DPAK PM+DR P+GRF EP E+A +FL
Sbjct: 95 NNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFL 234
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: A0A7W1S252_9CHLR (Glucose 1-dehydrogenase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7W1S252_9CHLR) HSP 1 Score: 150 bits (378), Expect = 1.120e-42 Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFLV 426
N AG+A +AP LE TV+D+D T+ VN+RA I+ A+ M+ARG GG IV+VSS A + A+++H++Y SKA ++ LTRVMA E H I+ N+V PT++LT MG K WG+PAKGDPM R PLGRF P +A V +L+
Sbjct: 79 NNAGIALLAPFLEVTVQDFDDTIAVNLRAALIIGQVVAKGMVARGKGGAIVNVSSQAGVAAVYEHAAYCASKAGLDHLTRVMALELGPHQIRVNSVNPTVILTPMGEKVWGEPAKGDPMRARIPLGRFGYPIHVAQAVAYLL 220
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Match: UPI001F1AC034 (glucose 1-dehydrogenase n=1 Tax=Acuticoccus sp. M5D2P5 TaxID=2910977 RepID=UPI001F1AC034) HSP 1 Score: 150 bits (379), Expect = 1.190e-42 Identity = 76/141 (53.90%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 1 NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIVSVSSTASIFALHDHSSYVTSKAAINGLTRVMAAEWSKHDIQCNTVGPTIVLTDMGSKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVFL 423
N AGVA IAP LE T EDWD +M VNVRAPF+LS A MIA+ +G KIV++SS + AL DH++Y +SK A+N LT+ + AEW++H+IQ N + PT+VLT MG + WG+ K PMI+ TPL RF EP E+A ++L
Sbjct: 95 NNAGVARIAPALELTAEDWDLSMAVNVRAPFLLSRALAPAMIAQRSG-KIVNISSQTGVIALDDHAAYASSKGALNALTKSLMAEWARHNIQVNAICPTVVLTPMGKEVWGEEDKSRPMIEATPLRRFGEPVEIADCALYL 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59426.13457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59426.13457.1 >prot_H-elongata_contig59426.13457.1 ID=prot_H-elongata_contig59426.13457.1|Name=mRNA_H-elongata_contig59426.13457.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp NTAGVATIAPLLEATVEDWDWTMNVNVRAPFILSTECARRMIARGTGGKIback to top mRNA from alignment at H-elongata_contig59426:868..2444+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59426.13457.1 ID=mRNA_H-elongata_contig59426.13457.1|Name=mRNA_H-elongata_contig59426.13457.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1577bp|location=Sequence derived from alignment at H-elongata_contig59426:868..2444+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59426:868..2444+ >mRNA_H-elongata_contig59426.13457.1 ID=mRNA_H-elongata_contig59426.13457.1|Name=mRNA_H-elongata_contig59426.13457.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig59426:868..2444+ (Himanthalia elongata Himel1 dioecious)back to top |