mRNA_H-elongata_contig5919.13432.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: D7FR99_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR99_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.780e-54 Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 1
Query: 25 QLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKT-NRQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KV 411
QL+D+QRELEDLRLENR F++YYERHAS+ A E D+EKRKT NRQRRRQLPTVLTIEQKVEIG+ E VA+KDLEDTKRNS KLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAE++ TG+T+A KV
Sbjct: 10 QLDDVQRELEDLRLENRIFKSYYERHASEVA-EVDEEKRKTTNRQRRRQLPTVLTIEQKVEIGVHEQEVAHKDLEDTKRNSEKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAENMRTGNTMAEKV 138
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A836CMH5_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH5_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.690e-34 Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 13 SSASQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKTNRQRRRQL-PTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KVQ*QLE 426
S ++LE L E E+L LEN + YYER+A+D + +D KR NRQRRRQ PT LT+EQK E+ E AVA + LE+ KR S +LIDTL AVLEETDIRIA+LKK+AYEFKRD+VVGAE++ TG TVA KV +E
Sbjct: 24 SETNRLEQLHDESEELTLENSILKDYYERNAADGVGDEED-KRLRNRQRRRQAAPTTLTLEQKAEVAEAEHAVAVQTLEEAKRGSERLIDTLHAVLEETDIRIAELKKDAYEFKRDVVVGAENMRTGKTVAEKVVRYME 161
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: K3WVN1_GLOUD (DUF4201 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVN1_GLOUD) HSP 1 Score: 119 bits (298), Expect = 6.490e-29 Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 22 SQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKR----KTNRQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KV 411
++LEDL R+ E ++ EN E+Y R+A DDEKR K +RQRR + +LT++QK ++ EL A K+LE+T+R S +L+DTL+AVLEETDIRIA+LKK+AYEFKRDIVVGAE+ TG T+A K+
Sbjct: 12 TKLEDLTRQNEIIKQENELLESYLHRNAQTLPGSDDDEKRDEKDKKSRQRRARAKMLLTMDQKNDLCSTELEAAQKELEETRRTSERLVDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKM 145
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A7S3XQG1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQG1_HETAK) HSP 1 Score: 119 bits (299), Expect = 6.560e-29 Identity = 69/133 (51.88%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 28 LEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKTNRQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KVQ*QLE 426
LE ++RE++ L +E E+YY RH+ + E + KR+ ++ P LTIEQK EI EL + +++E+TKRNS KLIDTL+AVLEET IRI++LK++AYEFKRDIVVGAE++ TG TVA KV +E
Sbjct: 31 LERVEREMDSLNIEVGVLESYYNRHSQEMGGEDEANKRRWRVAAGKKAPLTLTIEQKCEIANAELDESQREIEETKRNSEKLIDTLRAVLEETSIRISELKRDAYEFKRDIVVGAENMRTGRTVAEKVVRYME 163
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A1V9YA48_9STRA (DUF4201 domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YA48_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.160e-27 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 22 SQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKT-------NRQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KVQ*QLE 426
++LE+ R+ E + EN F+++ +R+A + A DDEK++ NRQRR++ +TIEQK +I EL A K++E+TKR+S +LIDTL+AVLEETDIRIA+LK +AYEFKRDIVVGAE+ TG T+A K+ +E
Sbjct: 15 AKLEEALRQNELISHENELFDSFLKRNAQPSNASEDDEKKEKPDKQAAKNRQRRQRPQATITIEQKNDICSAELEEAQKEIEETKRSSERLIDTLRAVLEETDIRIAELKMDAYEFKRDIVVGAENFRTGKTIAEKMVRYME 156
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A5D6Y8W9_9STRA (DUF4201 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8W9_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.900e-27 Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 19 ASQLEDLQRELEDLRLENRTFETYYERHA-----SDAAAEADDEKRKTNRQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KV 411
A LEDL R + L+ EN ++Y +R+A SD D++ RK RQRR + +LT++QK ++ EL A K+LE+T+R S +LIDTL+AVLEETDIRIA+LKK+AYEFKRDIVVGAE+ TG T+A K+
Sbjct: 19 AIDLEDLGRHNDVLKQENLLLDSYLQRNAQGLAGSDDENRRDEKDRKGQRQRRARAQALLTMDQKNDLCSTELEAAQKELEETRRTSERLIDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKM 154
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: H3GA29_PHYRM (DUF4201 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3GA29_PHYRM) HSP 1 Score: 113 bits (283), Expect = 9.600e-27 Identity = 70/136 (51.47%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 22 SQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKTN------RQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KV 411
++L+D+ + + L+ EN E+Y +R+ +DDE+++T+ RQRR + +LTIEQK +I EL A K+LE+TKR+S +LIDTL+AVLEETDIRIA+LKK+AYEFKRDIVVGAE+ TG T+A K+
Sbjct: 11 AKLDDVAHQNDVLKQENELLESYLQRNGQPTTG-SDDEEKQTDKKAGGSRQRRVRAQVMLTIEQKNDICSTELEAAQKELEETKRSSERLIDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKM 145
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A3F2RQ37_9STRA (DUF4201 domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ37_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.230e-26 Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 22 SQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKTN-------RQRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KV 411
++L+DL + + + EN E+Y +R+ D+EKR RQRR + +LTIEQK +I EL A K+LE+TKR+S +LIDTL+AVLEETDIRIA+LKK+AYEFKRDIVVGAE+ TG T+A K+
Sbjct: 11 AKLDDLAHQNDVFKQENELLESYLQRNGQPTTGSDDEEKRDDRDKKLAGVRQRRVRTQIMLTIEQKNDICSTELEAAQKELEETKRSSERLIDTLRAVLEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKM 147
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A8K1CQ56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ56_PYTOL) HSP 1 Score: 112 bits (279), Expect = 3.840e-26 Identity = 69/134 (51.49%), Postives = 92/134 (68.66%), Query Frame = 1
Query: 22 SQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKTNRQRRR----QLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KV 411
++LEDL R+ + L+ EN F++Y R A A DDEK+ + +LT+EQK +I EL A+K+LE+TKR S +LIDTL+AV+EETDIRIA+LKK+AYEFKRDIVVGAE+ TG T+A K+
Sbjct: 11 TKLEDLTRQNDVLKQENELFDSYLGRQAEGLAGSDDDEKKDXXXXXXXXXXARAQVMLTMEQKNDISSTELEAAHKELEETKRTSERLIDTLRAVIEETDIRIAELKKDAYEFKRDIVVGAENFRTGKTIAEKM 144
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Match: A0A485KME4_9STRA (Aste57867_9115 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KME4_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.810e-25 Identity = 72/144 (50.00%), Postives = 98/144 (68.06%), Query Frame = 1
Query: 22 SQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKR-----KTNR----QRRRQLPTVLTIEQKVEIGLKELAVANKDLEDTKRNSGKLIDTLKAVLEETDIRIADLKKEAYEFKRDIVVGAEHVMTGSTVA*KVQ*QLE 426
++LE+ R+ E L EN FE+Y +R+A A ++EK+ KTN+ QRR + +TIEQK +I EL A K++E+TKR S +LIDTL+AVLEETDIRI++LK +AYEFKRDIVVGAE+ TG T+A K+ +E
Sbjct: 12 TKLEEALRQNEQLAHENELFESYLKRNAQPNMAADEEEKKEKALDKTNQKKQGQRRPRPQATITIEQKNDISSAELEEAQKEVEETKRTSERLIDTLRAVLEETDIRISELKMDAYEFKRDIVVGAENFRTGKTIAEKMVRYME 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5919.13432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5919.13432.1 >prot_H-elongata_contig5919.13432.1 ID=prot_H-elongata_contig5919.13432.1|Name=mRNA_H-elongata_contig5919.13432.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp MFQLSSASQLEDLQRELEDLRLENRTFETYYERHASDAAAEADDEKRKTNback to top mRNA from alignment at H-elongata_contig5919:54..938- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5919.13432.1 ID=mRNA_H-elongata_contig5919.13432.1|Name=mRNA_H-elongata_contig5919.13432.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=885bp|location=Sequence derived from alignment at H-elongata_contig5919:54..938- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5919:54..938- >mRNA_H-elongata_contig5919.13432.1 ID=mRNA_H-elongata_contig5919.13432.1|Name=mRNA_H-elongata_contig5919.13432.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig5919:54..938- (Himanthalia elongata Himel1 dioecious)back to top |