prot_H-elongata_contig59188.13430.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59188.13430.1
Unique Nameprot_H-elongata_contig59188.13430.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length271
Homology
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A6H5JCL8_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCL8_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 5.580e-143
Identity = 215/271 (79.34%), Postives = 236/271 (87.08%), Query Frame = 0
Query:    1 MVSEIDVLVALAVCAHTWDWHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMANDSRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSSGCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALEKGEDLNLPALESDVG 271
            +V+E+DVL++L VC H WDW RP+LLPVGSQT+ IKGLRHPSVEA+RG+  FIPNDI++ NDSR+ IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPA EA M V+DRICAR+GASDNQLRGVSTFMAEMLET AILR+ +R+SLVIVDELGRGTSTCDGFGIAWAVADRL+SSG LCLFATHFHELTA+E +K  KGVQNLHV AEAD  SNKLTMLYKV +GSCDRSFGIHVARIANFP HVV EAE LA  LE GE L   A  SD G
Sbjct:  486 IVAELDVLLSLCVCVHLWDWVRPRLLPVGSQTIDIKGLRHPSVEAARGAGLFIPNDIKLGNDSRMTIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQSLVIVDELGRGTSTCDGFGIAWAVADRLISSGALCLFATHFHELTAIEQEKGGKGVQNLHVTAEADSASNKLTMLYKVMQGSCDRSFGIHVARIANFPGHVVSEAETLARCLENGEPLIGRANSSDNG 756          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A1D2A1F4_AUXPR (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A1F4_AUXPR)

HSP 1 Score: 262 bits (669), Expect = 3.210e-79
Identity = 148/258 (57.36%), Postives = 180/258 (69.77%), Query Frame = 0
Query:    1 MVSEIDVLVALAVCAHTWD--WHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMAN-DSRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAA 254
            +++E+DVLVA A  A T    + RP LLP     V++ G RHP VE   G  +FIPND  M   +S   I+TGPNM GKSTFIR VGI+ LLAQ+GS+VP  +A++ V D I AR+GA D+Q RGVSTFMAEMLE+ AIL+     SLVI+DELGRGTST DG G+AWA+++ LM+  GC  LFATHFHELTAL   +   GV+NLHV A  D  S  LTMLY+V  GSCD+SFGIHVA  A FP  +VE A + AAA
Sbjct:  386 VLAELDVLVAFADVAVTAPRPYVRPSLLPADGGRVELVGCRHPCVELQEGV-DFIPNDCVMQRGESWFQIITGPNMGGKSTFIRQVGISVLLAQVGSWVPCTQASIAVRDAIFARVGAGDSQARGVSTFMAEMLESAAILKGATPASLVIIDELGRGTSTWDGMGLAWAISEHLMNGIGCPTLFATHFHELTAL---RGAGGVKNLHVGAAIDHTSGALTMLYQVEEGSCDKSFGIHVAEFARFPPAIVEAARKAAAA 639          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A834CYR8_JUGRE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Juglans regia TaxID=51240 RepID=A0A834CYR8_JUGRE)

HSP 1 Score: 258 bits (659), Expect = 7.140e-79
Identity = 145/268 (54.10%), Postives = 180/268 (67.16%), Query Frame = 0
Query:    1 MVSEIDVLVALA--VCAHTWDWHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMAND-SRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHD--------KEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALE 256
            M+SE+DVL++ A   C+    + RP ++P     + ++G RHP VEA +   NFIPND ++    S   I+TGPNM GKSTFIR VG+  L+AQ+GSFVP  +A++ V D I AR+GA D QLRGVSTFM EMLET +IL+    +SL+I+DELGRGTST DGFG+AWA+ + L+       LFATHFHELTAL H+        K+  GV N HV A  D  S KLTMLYKV  G+CD+SFGIHVA  ANFPA VV  A   AA LE
Sbjct:  238 MLSELDVLLSFADLACSCPTPYTRPDIIPSDEGDIVLEGSRHPCVEA-QDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCVKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALAHESPDHGPHKKQTVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPASVVALAREKAAELE 504          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A5J4Y3N7_9CHLO (DNA mismatch repair n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3N7_9CHLO)

HSP 1 Score: 265 bits (678), Expect = 7.760e-79
Identity = 155/271 (57.20%), Postives = 187/271 (69.00%), Query Frame = 0
Query:    1 MVSEIDVLVA---LAVCAHTWDWHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMAN-DSRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALEKGEDLNLPAL 266
            +V+E+DVL+    +AV A T  + RPQ+LP     +K+ G RHP VEA  G  +FI ND  M   +S   I+TGPNM GKST+IR VG+  L+AQ+G FVP  EA + + D I AR+GA D QLRGVSTFMAEMLET AIL+    RSLVI+DELGRGTST DGFG+AWA+++ LM S GC  LFATHFHELTAL   K   GV NLHV    D  S KLTMLY+V+ G+CD+SFGIHVA  ANFP  VV+ A+  AA LE   D + P L
Sbjct:  606 LVAEMDVLLGFAEVAVNAPT-PYVRPQMLPPDDGQLKLVGCRHPCVEAQEGV-DFIKNDCCMQRGESWFQIITGPNMGGKSTYIRQVGVNVLMAQVGCFVPCDEACIAIRDCIFARVGAGDCQLRGVSTFMAEMLETAAILKGATSRSLVIIDELGRGTSTYDGFGLAWAISEHLMESIGCTTLFATHFHELTAL---KGPVGVANLHVETAIDAASGKLTMLYQVSPGACDQSFGIHVAEFANFPPEVVQLAKERAAELE---DFSTPML 868          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: I0YSX7_COCSC (DNA mismatch repair protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YSX7_COCSC)

HSP 1 Score: 262 bits (670), Expect = 6.650e-78
Identity = 153/272 (56.25%), Postives = 182/272 (66.91%), Query Frame = 0
Query:    1 MVSEIDVLVA---LAVCAHTWDWHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMAND-SRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALEKGEDLNLPALE 267
            MV+E+D+L     LAVCA    + RP +LP  S  +K+   RHP VEA  G   FI ND  M    S   ++TGPNMAGKST+IR VG+A L+AQ+G FV    A + V D I AR+GA D QLRG+STFMAEMLET AIL+    +SLVI+DELGRGTST DGFG+AWA+++ LM   GC  LFATHFHELTAL+      GV N HV    D  S KLTMLY+VT G+CD+SFGIHVA  A FP  VVE A+R AA LE   D + PA E
Sbjct:  605 MVAEMDLLAGFAELAVCAPL-PYVRPTMLPADSSELKLTACRHPCVEAQDGVE-FIANDCHMERGKSWFQVITGPNMAGKSTYIRQVGVAVLMAQVGCFVACEHARIAVRDCIFARVGAGDCQLRGISTFMAEMLETAAILKGASAKSLVIIDELGRGTSTYDGFGLAWAISEHLMQEIGCPTLFATHFHELTALQGPV---GVANKHVETAIDEASGKLTMLYQVTEGACDQSFGIHVAEFARFPPEVVELAKRKAAELE---DFSAPAQE 868          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A8J1TAS5_OWEFU (Ofus.G021027 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TAS5_OWEFU)

HSP 1 Score: 251 bits (642), Expect = 7.120e-78
Identity = 142/267 (53.18%), Postives = 189/267 (70.79%), Query Frame = 0
Query:    1 MVSEIDVLVALA-VCAHT-WDWHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMANDSRLA-IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALEKGEDLNL 263
            ++S++DVLV+LA V A+    + RP+LL  GS  +K++  RHP +E     + +IPNDIE + D  L  I+TGPNM GKST+IRS G+  L+AQIG FVP + A + +VD I AR+GA D+ ++GVSTFMAEMLET +ILR     SLVI+DELGRGTST DGFG+AWA+++ + +   C CLFATHFHELTAL    E   V NLHV A     ++ LT+LYKV  G CD+SFGIHVA +A+FP+HV++ A+  A+ LE  ++ NL
Sbjct:  110 VISQLDVLVSLAHVSANAPIPYIRPKLLKKGSGILKLEEARHPCLEMQDDVA-YIPNDIEFSKDGHLFHIITGPNMGGKSTYIRSAGVIVLMAQIGCFVPCSSAEISIVDCILARVGAGDSTVKGVSTFMAEMLETASILRCATEESLVIIDELGRGTSTYDGFGLAWAISEYIATKMKCFCLFATHFHELTALAG--EVPTVNNLHVTALTT--NDTLTLLYKVKPGVCDQSFGIHVAELAHFPSHVIQFAKNKASELEDYQNSNL 371          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A8B9RFA9_ASTMX (DNA mismatch repair protein Msh2 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9RFA9_ASTMX)

HSP 1 Score: 248 bits (632), Expect = 9.210e-78
Identity = 137/259 (52.90%), Postives = 180/259 (69.50%), Query Frame = 0
Query:    8 LVALAVCAHTWD--WHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMANDSRLA-IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALEKGEDLN 262
            +V+ AV +H     + RP++L  GS  + +KG RHP VEA    + FIPND+  A   ++  I+TGPNM GKST+IR VG+  L+AQIG FVP  EA + VVD + AR+GA D+Q++GVSTFMAEMLET AILR     SL+I+DELGRGTST DGFG+AWA+++ + +     CLFATHFHELTAL   +++  V NLHV A      + LTMLY+V +G CD+SFGIHVA +ANFP HV+  A   A  LE+ +D++
Sbjct:    2 VVSFAVVSHAAPVPYVRPRILEKGSGRLILKGSRHPCVEAQDDVA-FIPNDVTFARGEQMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIKGVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLFATHFHELTALA--QQEPTVCNLHVTALTT--DSTLTMLYRVKKGVCDQSFGIHVAELANFPKHVIANAREKALELEEFQDIS 255          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A1D2A3J8_AUXPR (DNA_MISMATCH_REPAIR_2 domain-containing protein n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A3J8_AUXPR)

HSP 1 Score: 262 bits (669), Expect = 1.060e-77
Identity = 148/258 (57.36%), Postives = 180/258 (69.77%), Query Frame = 0
Query:    1 MVSEIDVLVALAVCAHTWD--WHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMAN-DSRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAA 254
            +++E+DVLVA A  A T    + RP LLP     V++ G RHP VE   G  +FIPND  M   +S   I+TGPNM GKSTFIR VGI+ LLAQ+GS+VP  +A++ V D I AR+GA D+Q RGVSTFMAEMLE+ AIL+     SLVI+DELGRGTST DG G+AWA+++ LM+  GC  LFATHFHELTAL   +   GV+NLHV A  D  S  LTMLY+V  GSCD+SFGIHVA  A FP  +VE A + AAA
Sbjct:  599 VLAELDVLVAFADVAVTAPRPYVRPSLLPADGGRVELVGCRHPCVELQEGV-DFIPNDCVMQRGESWFQIITGPNMGGKSTFIRQVGISVLLAQVGSWVPCTQASIAVRDAIFARVGAGDSQARGVSTFMAEMLESAAILKGATPASLVIIDELGRGTSTWDGMGLAWAISEHLMNGIGCPTLFATHFHELTAL---RGAGGVKNLHVGAAIDHTSGALTMLYQVEEGSCDKSFGIHVAEFARFPPAIVEAARKAAAA 852          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A6P7VVE2_IXOSC (DNA mismatch repair protein Msh2 n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7VVE2_IXOSC)

HSP 1 Score: 248 bits (633), Expect = 3.050e-77
Identity = 137/260 (52.69%), Postives = 180/260 (69.23%), Query Frame = 0
Query:    1 MVSEIDVLVALAVCAHTWD--WHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMANDSRLA-IVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSSG-CLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALE 256
            ++S +DVLV LAV A +    + RP++L  GS  +K+ GLRH  VE S+ +  FIPNDIEM   S    I+TGPNM GKST+IRSV +A L+AQ+GSFVP   A + +VD +  RIGA D QL+GVSTFMAEMLE+  ILR     SLV++DELGRGTST DGFG+AWA+++ L       CLFATHFHELT L   +E   V+N+HV A  D+  +  T+LYKV  G C++SFG+ VA + +FP HV+++A ++ A LE
Sbjct:  118 VISHLDVLVGLAVAAASASKPYVRPKILEKGSGILKMTGLRHACVE-SQDNVMFIPNDIEMKKGSSSCYIITGPNMGGKSTYIRSVALAVLMAQVGSFVPCDSAELSLVDAVLTRIGAGDQQLKGVSTFMAEMLESAHILRNATTDSLVVIDELGRGTSTYDGFGLAWAISEHLSKEADAYCLFATHFHELTELA--QELPCVRNVHVTA--DVREDSFTLLYKVKPGVCNKSFGVEVAELTHFPEHVIKDARQVLAQLE 372          
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Match: A0A3M7P2Z6_BRAPC (DNA mismatch repair Msh2-like (Fragment) n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7P2Z6_BRAPC)

HSP 1 Score: 259 bits (662), Expect = 7.890e-77
Identity = 144/260 (55.38%), Postives = 182/260 (70.00%), Query Frame = 0
Query:    1 MVSEIDVLVALAVCAHTW--DWHRPQLLPVGSQTVKIKGLRHPSVEASRGSSNFIPNDIEMANDSR-LAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAEATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDELGRGTSTCDGFGIAWAVADRLMSS-GCLCLFATHFHELTALEHDKEKKGVQNLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAERLAAALE 256
            +VSE+D+ V+ ++ A +   D+ RP+L P+G+  +++K  RHP +E   G  NFIPND E   D +   I+TGPNM GKST+IR +G+  L+AQIGSFVPA+ A + + D I ARIGA+D Q +G+STFMAEMLET  IL+     SLVI+DELGRGTST DGFG+AWA++D L+    C  LFATHFHELTAL   +E K V N HV A    ES  LT+LYKV  G CD+SFGIHVAR+ANFP HV+E A   A  LE
Sbjct:  593 LVSELDIYVSFSLVAMSSQADYARPKLHPIGTGILRLKDSRHPCLELQEGI-NFIPNDCEFVKDEKNFCIITGPNMGGKSTYIRQIGVLVLMAQIGSFVPASSAEISIFDCILARIGANDCQNKGISTFMAEMLETSFILKTATSNSLVIIDELGRGTSTYDGFGLAWAISDYLVKKVKCFTLFATHFHELTALS--EEIKTVFNSHVSAMTSDES--LTLLYKVKPGVCDQSFGIHVARLANFPEHVIEYAREKAKYLE 847          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59188.13430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCL8_9PHAE5.580e-14379.34DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A1D2A1F4_AUXPR3.210e-7957.36DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A834CYR8_JUGRE7.140e-7954.10DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A5J4Y3N7_9CHLO7.760e-7957.20DNA mismatch repair n=1 Tax=Trebouxia sp. A1-2 Tax... [more]
I0YSX7_COCSC6.650e-7856.25DNA mismatch repair protein n=2 Tax=Coccomyxa TaxI... [more]
A0A8J1TAS5_OWEFU7.120e-7853.18Ofus.G021027 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A8B9RFA9_ASTMX9.210e-7852.90DNA mismatch repair protein Msh2 n=1 Tax=Astyanax ... [more]
A0A1D2A3J8_AUXPR1.060e-7757.36DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A6P7VVE2_IXOSC3.050e-7752.69DNA mismatch repair protein Msh2 n=1 Tax=Ixodes sc... [more]
A0A3M7P2Z6_BRAPC7.890e-7755.38DNA mismatch repair Msh2-like (Fragment) n=1 Tax=B... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000432DNA mismatch repair protein MutS, C-terminalSMARTSM00534mutATP5coord: 63..253
e-value: 7.3E-104
score: 361.0
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 67..256
e-value: 1.1E-75
score: 253.8
IPR000432DNA mismatch repair protein MutS, C-terminalPROSITEPS00486DNA_MISMATCH_REPAIR_2coord: 144..160
NoneNo IPR availableGENE3D3.40.50.300coord: 21..268
e-value: 1.2E-98
score: 331.9
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 1..257
IPR032642DNA mismatch repair protein Msh2PANTHERPTHR11361:SF35DNA MISMATCH REPAIR PROTEIN MSH2coord: 1..257
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59188contigH-elongata_contig59188:154..2117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59188.13430.1mRNA_H-elongata_contig59188.13430.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59188 142..2117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59188.13430.1 ID=prot_H-elongata_contig59188.13430.1|Name=mRNA_H-elongata_contig59188.13430.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MVSEIDVLVALAVCAHTWDWHRPQLLPVGSQTVKIKGLRHPSVEASRGSS
NFIPNDIEMANDSRLAIVTGPNMAGKSTFIRSVGIACLLAQIGSFVPAAE
ATMVVVDRICARIGASDNQLRGVSTFMAEMLETVAILRRVDRRSLVIVDE
LGRGTSTCDGFGIAWAVADRLMSSGCLCLFATHFHELTALEHDKEKKGVQ
NLHVMAEADLESNKLTMLYKVTRGSCDRSFGIHVARIANFPAHVVEEAER
LAAALEKGEDLNLPALESDVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR032642Msh2
IPR027417P-loop_NTPase