prot_H-elongata_contig58834.13384.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: D8LST5_ECTSI (DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST5_ECTSI) HSP 1 Score: 107 bits (267), Expect = 8.720e-27 Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 3 ERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKE 78
ER+ L+K QAEAA+ AFT+ ++ V+DGNKI+LQGFGTFE R R GR GRNPRTGE ++IKATT PAFSASK FK+
Sbjct: 78 ERSNLDKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKD 153
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: A0A835Z9S8_9STRA (DNA-binding protein HU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S8_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.860e-24 Identity = 45/79 (56.96%), Postives = 65/79 (82.28%), Query Frame = 0
Query: 4 RAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQERE 82
++GL+KTQ +AA+ AF +T+++ V+DG K++L GFGTFESR+RA RQGRNP+TGE + I A+ PAFSA+K FK++ +E
Sbjct: 13 KSGLSKTQTDAAISAFMDTVMEAVADGKKVSLVGFGTFESRERAARQGRNPQTGEALSIPASKAPAFSAAKAFKDRVKE 91
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: UPI001A0860CC (HU family DNA-binding protein n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI001A0860CC) HSP 1 Score: 95.1 bits (235), Expect = 1.210e-22 Identity = 50/96 (52.08%), Postives = 62/96 (64.58%), Query Frame = 0
Query: 3 ERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQERENQAHRLSIAPPPPSDT 98
++ + K +A+A V A +TI+D VS GNK+ L GFGTFE+R R R+GRNP+TGE I I ATTVPAFSA K FKE +APP P T
Sbjct: 12 QKVSVTKKEADAIVGAMVDTIMDTVSSGNKVTLVGFGTFEARNRQAREGRNPKTGEAIAIPATTVPAFSAGKQFKEM----------VAPPAPKAT 97
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: UPI000349D0E7 (HU family DNA-binding protein n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI000349D0E7) HSP 1 Score: 93.2 bits (230), Expect = 5.200e-22 Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 3 ERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQ 79
++A +NK QA+ + A E IVD VS GNK+ L GFG+FE R+R R+GRNP+TG+ +EI ATTVPAFSA K+F+E+
Sbjct: 12 KKASVNKKQADEVLTATLEVIVDAVSSGNKVTLVGFGSFEPRERKAREGRNPKTGDKMEIPATTVPAFSAGKSFRER 88
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: E6MGM2_9FIRM (DNA-binding protein HU n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 TaxID=887929 RepID=E6MGM2_9FIRM) HSP 1 Score: 92.8 bits (229), Expect = 6.770e-22 Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 0
Query: 1 MMERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKE 78
M E+ GL K AE A+ AFT+TIV+ + G+K++L GFGTF+ R RA RQG NPRT EPIEIKA+ PAF A K FK+
Sbjct: 10 MAEKTGLPKKDAEKALTAFTDTIVETLQKGDKVSLVGFGTFDVRHRAARQGLNPRTKEPIEIKASDAPAFKAGKAFKD 87
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: UPI001F2255C6 (HU family DNA-binding protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F2255C6) HSP 1 Score: 93.2 bits (230), Expect = 6.870e-22 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 4 RAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQERENQA 85
+A K +A+A + A ++I++ VS G K+ L GFGTFE+RQR R+GRNP TGEPI+I ATTVPAFSA K FKE+ QA
Sbjct: 13 KASTTKKEADAVLTAVVDSIIEAVSAGEKVTLVGFGTFEARQRQAREGRNPSTGEPIQIPATTVPAFSAGKLFKEKVAPTQA 94
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: K9U4A1_CHRTP (Bacterial nucleoid protein Hbs n=3 Tax=Chroococcidiopsis TaxID=54298 RepID=K9U4A1_CHRTP) HSP 1 Score: 92.8 bits (229), Expect = 7.360e-22 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 3 ERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQ 79
E+A + K QA+A + A ETI+D VS G+K+ L GFG+FESR+R R+GRNP+TG+ +EI AT VPAFSA K FKE+
Sbjct: 12 EKASVTKKQADAVLTAALETIIDAVSTGDKVTLVGFGSFESRERKAREGRNPKTGDKMEIPATKVPAFSAGKLFKEK 88
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: UPI001BAF821F (HU family DNA-binding protein n=1 Tax=Acaryochloris marina TaxID=155978 RepID=UPI001BAF821F) HSP 1 Score: 92.4 bits (228), Expect = 9.590e-22 Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0
Query: 3 ERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFK 77
ER+G K QA+ + A TE I+D VS G K+ L GFG+FE+R R R GRNP+TG+ ++IKATTVPAFSA K+FK
Sbjct: 12 ERSGATKKQADTILSAMTEAIIDSVSSGEKVTLVGFGSFEARDRKARDGRNPQTGKKLKIKATTVPAFSAGKDFK 86
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: A0A7C3PJK0_9CYAN (HU family DNA-binding protein n=2 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PJK0_9CYAN) HSP 1 Score: 92.0 bits (227), Expect = 1.360e-21 Identity = 45/76 (59.21%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 4 RAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQ 79
+AG+ K A+A + A TETI++ V+DG K+ L GFGTFE R R R+GRNP TG+PI I ATTVP FSA K FKE+
Sbjct: 13 KAGVTKKDADAILSALTETIMEAVADGEKVTLVGFGTFEPRDRQAREGRNPSTGKPITIPATTVPGFSAGKLFKEK 88
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Match: F4Y0D3_9CYAN (Bacterial nucleoid protein Hbs n=29 Tax=Moorena TaxID=1155738 RepID=F4Y0D3_9CYAN) HSP 1 Score: 92.0 bits (227), Expect = 1.480e-21 Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 0
Query: 3 ERAGLNKTQAEAAVVAFTETIVDFVSDGNKINLQGFGTFESRQRAGRQGRNPRTGEPIEIKATTVPAFSASKNFKEQ 79
E+A + K QA+A + A ETI++ VS+G+K+ L GFG+FESR+R R+GRNP+TGE +EI AT VPAFSA K FKE+
Sbjct: 12 EKATVTKKQADAVLTATIETIMEAVSEGDKVTLVGFGSFESRERKAREGRNPKTGEKMEIPATKVPAFSAGKVFKER 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58834.13384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig58834.13384.1 ID=prot_H-elongata_contig58834.13384.1|Name=mRNA_H-elongata_contig58834.13384.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bpback to top |