mRNA_H-elongata_contig5879.13376.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: D7FMZ8_ECTSI (Phosphomevalonate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMZ8_ECTSI) HSP 1 Score: 688 bits (1775), Expect = 9.610e-241 Identity = 377/570 (66.14%), Postives = 439/570 (77.02%), Query Frame = 1
Query: 1 STVSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFRE---GGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAAS--GKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW 1695
+TVSAPGKVLVAGGYLVLDRPN+GVVLAATARFFTSVKWTEEK ++A E G + LLRIKVESPQF V+WYECV + DGRLP LLAS +Q SN+FVER L+YVLGYL + GG + +++ ++G A+AIKLRADNDFYSQ SQL+ARGLP TS ALATLP F+ECP+SEDG V+VAKTGMGSSAAL SSLVGALLSFFGA LP D E+ APA SP G G++ESL LTHNLAQACHCVAQGKVGSGFDVSAA+YGTH YTRFSPS+L DALSAGD+ ++ + + T +ER ACV+A GGWDAER LRLP CFRLLMGDVCGGSSTPSMVRKVQAWR +TA +AK+LWS+LGSTN IA+ LN+LAA A+ S G+SFE DAKVL+++P S+W + G G L + Q+LL L+++FAKARQLLREMGEDAGVPIEPPVQT+L++AT LPGVLCAGVPGAGGVDAVFAIVVHP+AE GV+DLWASW V E S+G VCPLLLTAS+G L+GG+ +R L W
Sbjct: 10 TTVSAPGKVLVAGGYLVLDRPNIGVVLAATARFFTSVKWTEEKTPAPVAAP--EKGLQQSLLRIKVESPQFRSVHWYECVMYEDGRLPVLLASSDQTSNVFVERALTYVLGYLLQAKGVGGGKSNDVKDTVRSAGDKGHALAIKLRADNDFYSQTSQLRARGLPSTSGALATLPPFLECPVSEDGAVVVAKTGMGSSAALVSSLVGALLSFFGAARLPCFDGTP--DEEPTGAPAC-GSPSGTDAAVL-GVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHTYTRFSPSELADALSAGDAASADGSSGFSASPTPIERTTACVQARGGWDAERSQLRLPPCFRLLMGDVCGGSSTPSMVRKVQAWRAHPSTADQAKELWSTLGSTNTVIAKTLNALAAMAAVVPGGSTGGQSFEADAKVLSALPPSKWAELA--GSGTLGADSLQELLHLRTAFAKARQLLREMGEDAGVPIEPPVQTKLVNATSTLPGVLCAGVPGAGGVDAVFAIVVHPDAEDGVRDLWASWRVGADTE-SEGEGATVCPLLLTASEGGLEGGIVSSRTLGW 570
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A835YYC0_9STRA (Phosphomevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC0_9STRA) HSP 1 Score: 415 bits (1066), Expect = 2.880e-134 Identity = 256/558 (45.88%), Postives = 327/558 (58.60%), Query Frame = 1
Query: 7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAA-ASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTC 1677
VSAPGKVL+ GGYLVL++PN G+VL TARF T+ W LL +++ S Q L I V+SPQF Y+Y C F G LP L Q SN++VE TL YV+ +L E ++ + + IKL ADNDFYSQ +QL+ARGLP T+EALA+LP F+ CP + DG + V+KTGMGSSAA+ +SLVGALL F AV LP D P + A+ + +G + + HNLAQACH AQGK+GSGFDV+AA+YGTH+YTRFSP+ L D LSA D D R+ V A WD +R + LP F LLMGDV GGSSTPSMV+ V WR +T + DLW L N +I E L L+ S S +++ S + L+ +P+ + G S +L +L+ +F + R LLREMG+ AGVPIEPP QT L +AT ALPGVLC+GVPGAGGVDA++AIVVHP+A V+DLWASW + + VCPLLL A+ L G+ C
Sbjct: 16 VSAPGKVLLTGGYLVLEQPNSGIVLGTTARFHTTTCWERYAPLCLL---LQQTSSHTQNLAITVDSPQFRQQYYYTCSFPPAGVLPVLSPKTGQPSNVYVECTLKYVMAFLATEMAEQQLS------------GVLHIKLEADNDFYSQTAQLQARGLPVTAEALASLPTFLPCP-TVDGHLQVSKTGMGSSAAMITSLVGALLVTFHAVELPSADTP-------TICDASGNVVEG------------MRIVHNLAQACHAAAQGKIGSGFDVAAAVYGTHVYTRFSPTVLADVLSATDGEEGVGD-----------RLRFAVVATQ-WDLKREPIHLPQGFCLLMGDVQGGSSTPSMVKSVLKWRAAESTKDSSADLWGKLAQVNNSIRELLQELSGLDGSGSSSSNSLSAAATYQHLSLLPSHQRGSVSSTASSSL--------CKLRDAFVQMRALLREMGDAAGVPIEPPEQTALANATAALPGVLCSGVPGAGGVDAIYAIVVHPSAASAVQDLWASWQTVSSTGTTDAQRPAVCPLLLRATGAALGDGIVC 518
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A067BR68_SAPPC (Phosphomevalonate kinase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR68_SAPPC) HSP 1 Score: 298 bits (764), Expect = 3.550e-90 Identity = 218/560 (38.93%), Postives = 292/560 (52.14%), Query Frame = 1
Query: 7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVL----GYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNR-APAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
VSAPGKVL+AGGYLVL+ G VLAA++RF T+V L ASV +P L + V SPQFH V V D SP+ +N +VE+TL G L GA+ A++ + + I L ADNDFYSQ +QL RG P T E LA LP F+ CP+ GT ++AKTGMGSSAAL +SLVGA+L FFGAV LP T + + + + H+LAQ H +AQ K+GSGFDVSAA YG Y RFSP ++ S V+ ++++ APA +AAC+++ WD LP ++MGDV GS+T SMVR+V AW++ A LW +L + N+ I +L A A +D LA P++ W L+ V LL ++++F + R LLR MG AGV IEP QT LIDAT +PGVL GVPGAGG DA+FA+V+HP+ V+ W++W+ + V LL+ +K +QGG+
Sbjct: 10 VSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTVS---------LDASV----TPSPALAVTVHSPQFHQVL--TGVLSADA----FELSPQSPANPYVEKTLQVCAKALHGLLGPAFGAKLASLAKTHS--------LRITLEADNDFYSQSAQLLERGQPVTREHLAKLPAFLPCPLDASGTPVIAKTGMGSSAALITSLVGAVLRFFGAVTLP--------------------------TAQSAAATPGVDIVHHLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFSPERV-------QSFVAQKNLSAIAPAD-----LAACIQSR--WDNVVKAFGLPHNMHMIMGDVNAGSATVSMVRQVLAWKKADPAGSHA--LWETLNAKNMQIVAQFEALPAVA-----------DDVWARLAEAPSTSWVH--------LNAVLGAALLAMRATFEEIRHLLRTMGSAAGVAIEPEEQTALIDATMRVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVETFWSTWTATR-----------VSALLVDVAKSGVQGGL 470
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A7S2LKP2_9STRA (Phosphomevalonate kinase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKP2_9STRA) HSP 1 Score: 302 bits (773), Expect = 8.990e-90 Identity = 235/604 (38.91%), Postives = 304/604 (50.33%), Query Frame = 1
Query: 4 TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFFTSVKWTE----EKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGR---------LPTLLASPEQAS---NIFVERTLSYVLGYLFREGGAERATMENAFTR---GQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNR--APAKTSLERIAACVR-APGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSA-TACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSF-----EDDAKVLASIPASEW-----GDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVH-PNAEGGVKD-----LWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW 1695
+VSAPGK LVAGGYLVL+ PN GVVLAA RF T++ + + K ++ S+ + + + V SPQF ++ Y + G L P AS N FVERTL GYL + G E + F + E A+AIKLRADNDFYSQI+ LK RGL T + + +L F+ CP +G V+V KTGMGSSAAL +S+VGALL FFGA LP ID + T V N+ E L + HNLAQ CHC AQGKVGSGFDVS+A++G+H+YTRFS + + D V N + + A+T ++ V WD + LP LLM DVCGGS +PSM RK+ W++ + T + W L N IA L+ K F D ++AS A +W + DV QLL L+ +F ++RQ L+ MG AGVP+EP QT L DAT LPGV+ AGVPGAGG DA+F I V P GG D + W ++ S VVCPL + A+ GG+ C L W
Sbjct: 65 SVSAPGKALVAGGYLVLESPNPGVVLAADGCRFHTTIMFRQPCNTSKEGGVIGNSINATW---ESVPLDVYSPQFDKIFCYYLSYSLTGEDGDDSDDDGEDVLRLQPRTASYEPNKFVERTLLLAFGYLRQSLGKE--LFHSRFRQHGLNSNERVALAIKLRADNDFYSQINHLKQRGLDLTPQDVESLEPFLPCPKDSEGKVIVNKTGMGSSAALVTSIVGALLQFFGASSLPMIDGEMTET----VGQENQE--------------EGLRIAHNLAQICHCYAQGKVGSGFDVSSAVFGSHVYTRFSKGVINKFIE--DVEVRNETLKDGLSLAETDSSQLFELVTDIDKKWDCTVQPINLPEGLELLMADVCGGSESPSMARKILEWKKKNRETGFLSGYYWKDLKRCNKKIASLLSDQYTK---------KPFCNGLVRDGPLIIASRTAEQWKKPMPSTWHEFDGSSWDVA--MQLLDLRMAFLESRQNLKGMGTAAGVPVEPDSQTTLADATMKLPGVVAAGVPGAGGYDALFVIYVKGPPTNGGKSDQVRDDIGNLWRDLSNQDNST----VVCPLSVRAAG---SGGL-CASSLQW 624
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A1V9YNS4_9STRA (Phosphomevalonate kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNS4_9STRA) HSP 1 Score: 292 bits (748), Expect = 7.590e-88 Identity = 218/559 (39.00%), Postives = 286/559 (51.16%), Query Frame = 1
Query: 7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVL----GYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
VSAPGKVL+AGGYLVL+ G VLAA++RF T+V +L + +V AG L + + SPQFH V D SPE +N +VE+TL G L GA A++ + + I L ADNDFYSQ SQL RGLP T + LATLP F+ CP+ DG ++ KTGMGSSAAL +SLVGA+L FFG+V LP P + +S G+ + HNLAQ H +AQ K+GSGFDVSAA YG Y RF P ++ + V R++ A S +A C+ A WD LP R++MGDV GS+T SMVR+V AW+ SA + LW L + N+AI +L + A LA+ ++ W +V T Q +Q ++F + R LLR MG AGV IEP QT LIDAT +PGVL GVPGAGG DA+FA+V+HP+ V+ WA+W+ V LL+ +K +QGG+
Sbjct: 6 VSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTV--------SLAAPTVPTAG-----LAVVICSPQFHQTL--SGVLSAD----VFELSPESPANPYVEKTLQVCAKALHGLLGASFGANLASLSAEHS--------LLITLEADNDFYSQSSQLLERGLPVTRDNLATLPAFLPCPVDADGRAIIMKTGMGSSAALITSLVGAVLRFFGSVTLP--------------TPTSTTSSPGV------------DVVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFHPDRI-------KAFVGQRNL----ADLSAAELATCISAQELWDNVVKPFGLPPSMRMIMGDVNAGSATVSMVRQVLAWK--SADPVGSTALWEKLNAKNMAIVAQFEALPVVSPHVWAQ-----------LATTTSASWPQVHP------EVGTILQAMQ--ATFYEIRSLLRSMGTQAGVGIEPAEQTALIDATMQVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVEAFWATWTATP-----------VSALLVDVAKSGVQGGL 468
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A1V9Z1M7_9STRA (Phosphomevalonate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1M7_9STRA) HSP 1 Score: 284 bits (727), Expect = 8.480e-85 Identity = 210/555 (37.84%), Postives = 281/555 (50.63%), Query Frame = 1
Query: 7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
VSAPGKVL+AGGYLVL+ G VLAA++ F TSVK L+ S E GS + + V SPQFH + +G S E N +VE+T+ L GAE A E ++ I L ADNDFYSQ L RGL T LA LP F+ CP+++ G ++ KTGMGSSAAL +SLVGA+L FF AV LP TT S + + + HNLAQ H +AQ K+GSGFDVSAA YG Y RF P ++ S V+ ++++ S + C++ WD +P ++MGDV GS+T SMVRKV AW+ SA ++ LW SL + N+ I +SL A+ ++ LA+ +++W + AL + ++++F + R LLREMG AGVPIEP QT LIDAT LPGVL GVPGAGG DA+FAIV+HP+ V+ W+ W+ + V LL+ + QGG+
Sbjct: 4 VSAPGKVLIAGGYLVLEPLYAGAVLAASSCFHTSVK--------LIQKSTEILGSG---INVIVLSPQFHQTL--QGTLSENG----FTLSKESPQNPYVEKTMQVCAKALTGLLGAEFAQKLGKMA----EKHSLEITLEADNDFYSQSEHLVKRGLAMTRANLAQLPPFLPCPLNDQGQAIIMKTGMGSSAALITSLVGAILRFFDAVTLP--------------------------TTASSTTTAGVDIVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQRYNRFHPDRI-------QSFVAEKNLSNI----SASELTHCIKTQSLWDNVVKPFGIPPNMHMIMGDVNAGSATVSMVRKVLAWK--SADPKGSQTLWESLNAKNMQIISCFDSLPTAS-----------DEIWLRLAATTSAKWPSIHAQLGNAL--------VAMQTTFYEIRALLREMGNGAGVPIEPTEQTALIDATMQLPGVLFGGVPGAGGNDAIFAIVLHPSVLSQVETFWSKWTATR-----------VSALLVDVAPSGFQGGL 468
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: B8BYG3_THAPS (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYG3_THAPS) HSP 1 Score: 292 bits (747), Expect = 8.610e-85 Identity = 222/595 (37.31%), Postives = 305/595 (51.26%), Query Frame = 1
Query: 4 TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFFTSVKWTEE----KASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVF------HTDGRLPTLLASPE-QASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPS---QLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDL-WSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKV-LASIPASEW-----GDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVH---------PNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW 1695
TVSAPGKVL+AGGYLVL+ PN GVVLAA RF T+V + + TL +V P + V SPQF V+ Y + D + PE SN FVER+L L Y+ + G + + + + G A+AIKLRADNDFYSQI+ LK RGL T + + +L F+ CP E G ++V KTG+GSSAAL +SLVGALLSFF V LP D G + N E L + HNL+Q CHC AQGKVGSGFDVS+A+YG+HIYTRFS + + L+++ A D+ ++ E + + WD + LP LLM D+CGGS +PSM +K+ W++++ D W L N I +++ A S +V K + D V LAS A +W + D+ +LL L+ +F ++RQ L+ MG+ A VP+EP QT L +AT LPGV+ +GVPGAGG DA+F + V + + +LW +S ++ VVCPL + A+ + G+ C L W
Sbjct: 193 TVSAPGKVLIAGGYLVLESPNPGVVLAAKGCRFHTTVMFRQPFNIGVGDTLGLNAVGMESIP-----LDVYSPQFDKVFSYRLSYLLGSQDDDDVAIRLQPRHPETHTSNKFVERSLLLALSYIQQSIGLQE--FHSKLRQQDDNGGALAIKLRADNDFYSQITHLKQRGLDLTPKNIESLEPFLPCPKDEMGNLVVNKTGLGSSAALVTSLVGALLSFFDVVSLPVTKD------------------GGTNSNNKELHEEGLRIAHNLSQICHCHAQGKVGSGFDVSSAVYGSHIYTRFSENVINRFLESVDAQKGFEGGLDLTGILSQQLRELVNDTTKE---WDCAVTPISLPQGLELLMADICGGSESPSMAKKILEWKKNNRKVGFLDDYYWKDLKRCNNKIVSLISNQLA--SQTVL---KGLQRDGPVILASRTAEQWKKPMPSSWHEFEGSSWDIAG--KLLDLRMAFMESRQNLKGMGKAADVPVEPDEQTNLANATMKLPGVVASGVPGAGGYDALFVVYVKGTVTCVDKSDSVRDNIANLWRDFS-------NQNDTTVVCPLSVKAAGFGGENGL-CASALRW 744
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: K0TGY4_THAOC (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGY4_THAOC) HSP 1 Score: 290 bits (743), Expect = 1.870e-84 Identity = 226/580 (38.97%), Postives = 300/580 (51.72%), Query Frame = 1
Query: 4 TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFFTSVKWTE---EKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDG--RLP--TLLASPEQAS---NIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGS-AIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQL---LDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDL-WSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAK-----VLASIPASEW-----GDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVH-PNAEGGVKDLWASWSVCKGEER--SKGRIGVVCPLLLTASKGD 1656
TVSAPGK LVAGGYLVL++PN G+VLAA+ RF TS+ + + ST++ AS+ A S + + + SPQF V+ Y + +G +P L P +A N FVER+L LGYL R+ +A E G A+AIKLRADNDFYSQI+ LK RGL T LA L F+ CP G ++V KTGMGSSAAL +SLVGALL+FFGA+ + + + DG+ E L L HNLAQ HC AQGKVGSGFDVSAA+YG+H+YTRFS + + L++LS+ + + + S + + + WD + LP LLM DVCGGS +PSM RK+ W+ D W L N IA L + ++F D + +L++ A +W + DV +LL L+ S +ARQ L+ MG A VP+EP Q+ L + T LPGV+ AGVPGAGG DA+F + V P G D S+C +R + VCPL + AS D
Sbjct: 173 TVSAPGKALVAGGYLVLEQPNPGLVLAASGCRFHTSITFRPPHTSQVSTVIGASINAAWSS---IPLDIYSPQFDKVFSYYLSYSMNGDQNVPESVLELQPRKAPHEPNKFVERSLLLSLGYL-RQSLGPKAFHERLHPMNSNGGRVALAIKLRADNDFYSQIAALKDRGLDLTPSNLAALEPFLPCPKDATGKLVVNKTGMGSSAALVTSLVGALLTFFGAISI------------------SEPTDDGVKQQ------EGLRLAHNLAQISHCYAQGKVGSGFDVSAAVYGSHVYTRFSKTIIHPFLESLSSANEG----EALQLTGTLSRDLVRLVDDSDRAWDCTVHPVALPPGLELLMADVCGGSESPSMARKILDWKRSKRRTGFMDDYYWKDLKRVNAKIARLLTTTFKE---------QTFLDGLERDGPVILSTRTAEQWKKPMPSSWHEFEGSSWDVAL--KLLDLRMSILEARQNLKGMGNAASVPVEPAEQSLLANETMKLPGVVAAGVPGAGGYDALFVVYVEGPKTNDGSSDHVRD-SICSLWKRISEENSATTVCPLSVRASGID 708
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A6G0X5S9_9STRA (Phosphomevalonate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5S9_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.260e-83 Identity = 208/556 (37.41%), Postives = 274/556 (49.28%), Query Frame = 1
Query: 7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLP-TLLASPEQASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
VSAPGKVL+ GGYLVL+ G V+AA++RF T+V L E + + ++V SPQFH GRL T + N +VE+T+ + L G + + IAI L ADNDFYSQ QL+ RGL + + LATLP+F+ + + G +AKTGMGSSAAL +SLVGALL FF A +P + A + ++ G+ + HNLAQ CH +AQ K+GSGFDVSAA YG YTRF P + L+ G +++ +A R WD LP ++MGDV GS+T SMVRKV AW+ A LW +L + N AI +AA S S + + L+ +PASEW A D L+ L+ +F R LREMG AGVPIEP QT LIDAT +PGVL AGVPGAGG DA+FAIV+H + V+ W++W+ V LL+ A+ QGG+
Sbjct: 3 VSAPGKVLITGGYLVLEPEFSGAVIAASSRFHTTVS---------LEPLDESNQANEDGVAVRVRSPQFHQTM--------HGRLTATAFHFTDATENPYVEKTIHVCVAAL--SGLLGHDSFAARIEEIRRANQCIAITLEADNDFYSQREQLERRGLHVSRKHLATLPRFLPSLLDDAGRAKIAKTGMGSSAALITSLVGALLGFFNAADIP------------STAHDDENTRKGV------------QIVHNLAQICHSIAQEKIGSGFDVSAASYGNQRYTRFRPDGIQAFLNGG----------------AIDPVALAARIAAPWDNIVRPFCLPEGMHMIMGDVNAGSATVSMVRKVLAWKTADPEGSAA--LWKALNAKNEAIPAGFERIAAHLSQS---------NSLEALSRLPASEWT--------AADATVGALLVDLRQTFVDVRSHLREMGTLAGVPIEPADQTALIDATMQVPGVLFAGVPGAGGNDAIFAIVLHESVLDKVEQFWSTWTATS-----------VSALLVDAAPNGWQGGL 469
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A485KV08_9STRA (Phosphomevalonate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KV08_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.760e-83 Identity = 224/565 (39.65%), Postives = 286/565 (50.62%), Query Frame = 1
Query: 7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFREGGAER--ATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSL----AAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCK-GEERSKGRIGVV---CPLLLTASKGDLQGGV 1671
VSAPGKVL+AGGYLVL+ G VLAA++RF T+V A+T S + +++ SPQFH H + T + E A+N +VE+T+ + L GA A +++ R Q + I L ADNDFYSQ QL+ RGL + L TLP F+ + G +AKTGMGSSAAL +SLVGAL+ FFGA LP R+ D ATT L L HNLAQ CH +AQ K+GSGFDVSAA YG Y RF P L+ A +S + +AAC+ + WD LP ++MGDV GS+T SMVRKV AW++ A LW++L + N AI L L AAA S + AAS VLA+ EW T D V L+ L+ +F R+LLR MG+ AGVPIEP QT LIDAT +PGVL AGVPGAGG DA+FAIV+ V+ W +W+ G R G G V +L+ + QGG+
Sbjct: 3 VSAPGKVLIAGGYLVLEPELSGAVLAASSRFHTTVDVASLDATTSTS-----------FVPVRIHSPQFHQT------MHGELIATTFRFTKESAANPYVEKTIRVCVAALVGLLGATAFSARVQDMLDRRQ----CLMITLEADNDFYSQRDQLQRRGLSVSRANLKTLPAFLPSLQDDAGAAKIAKTGMGSSAALITSLVGALVGFFGAAALP-----------------TRTHHD--ATTRAG-----LDLVHNLAQLCHSIAQEKIGSGFDVSAASYGNQRYNRFRPD-LIQAFLGDES------------ECDPTALAACLTS--SWDNLVRPFTLPDGMHMIMGDVNAGSATVSMVRKVLAWKQTDPAGSAA--LWATLNAKNDAIPTQLAQLHATTAAAGSGAAAAS-------LAVLATKSHMEWVAT--------DAVVGPLLVSLRDTFLDIRRLLRRMGDAAGVPIEPADQTALIDATMDVPGVLFAGVPGAGGNDAIFAIVLDAAVLDRVEAFWGTWTATSCGHWREMGANGCVYRVSAMLVDVAPNGWQGGL 490 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5879.13376.1 >prot_H-elongata_contig5879.13376.1 ID=prot_H-elongata_contig5879.13376.1|Name=mRNA_H-elongata_contig5879.13376.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=443bp MENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFback to top mRNA from alignment at H-elongata_contig5879:3190..6996+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5879.13376.1 ID=mRNA_H-elongata_contig5879.13376.1|Name=mRNA_H-elongata_contig5879.13376.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3807bp|location=Sequence derived from alignment at H-elongata_contig5879:3190..6996+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5879:3190..6996+ >mRNA_H-elongata_contig5879.13376.1 ID=mRNA_H-elongata_contig5879.13376.1|Name=mRNA_H-elongata_contig5879.13376.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2658bp|location=Sequence derived from alignment at H-elongata_contig5879:3190..6996+ (Himanthalia elongata Himel1 dioecious)back to top |