mRNA_H-elongata_contig5879.13376.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5879.13376.1
Unique NamemRNA_H-elongata_contig5879.13376.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: D7FMZ8_ECTSI (Phosphomevalonate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMZ8_ECTSI)

HSP 1 Score: 688 bits (1775), Expect = 9.610e-241
Identity = 377/570 (66.14%), Postives = 439/570 (77.02%), Query Frame = 1
Query:    1 STVSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFRE---GGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAAS--GKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW 1695
            +TVSAPGKVLVAGGYLVLDRPN+GVVLAATARFFTSVKWTEEK    ++A   E G  + LLRIKVESPQF  V+WYECV + DGRLP LLAS +Q SN+FVER L+YVLGYL +    GG +   +++      ++G A+AIKLRADNDFYSQ SQL+ARGLP TS ALATLP F+ECP+SEDG V+VAKTGMGSSAAL SSLVGALLSFFGA  LP  D      E+   APA   SP G       G++ESL LTHNLAQACHCVAQGKVGSGFDVSAA+YGTH YTRFSPS+L DALSAGD+  ++     + + T +ER  ACV+A GGWDAER  LRLP CFRLLMGDVCGGSSTPSMVRKVQAWR   +TA +AK+LWS+LGSTN  IA+ LN+LAA A+     S  G+SFE DAKVL+++P S+W +    G G L   + Q+LL L+++FAKARQLLREMGEDAGVPIEPPVQT+L++AT  LPGVLCAGVPGAGGVDAVFAIVVHP+AE GV+DLWASW V    E S+G    VCPLLLTAS+G L+GG+  +R L W
Sbjct:   10 TTVSAPGKVLVAGGYLVLDRPNIGVVLAATARFFTSVKWTEEKTPAPVAAP--EKGLQQSLLRIKVESPQFRSVHWYECVMYEDGRLPVLLASSDQTSNVFVERALTYVLGYLLQAKGVGGGKSNDVKDTVRSAGDKGHALAIKLRADNDFYSQTSQLRARGLPSTSGALATLPPFLECPVSEDGAVVVAKTGMGSSAALVSSLVGALLSFFGAARLPCFDGTP--DEEPTGAPAC-GSPSGTDAAVL-GVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHTYTRFSPSELADALSAGDAASADGSSGFSASPTPIERTTACVQARGGWDAERSQLRLPPCFRLLMGDVCGGSSTPSMVRKVQAWRAHPSTADQAKELWSTLGSTNTVIAKTLNALAAMAAVVPGGSTGGQSFEADAKVLSALPPSKWAELA--GSGTLGADSLQELLHLRTAFAKARQLLREMGEDAGVPIEPPVQTKLVNATSTLPGVLCAGVPGAGGVDAVFAIVVHPDAEDGVRDLWASWRVGADTE-SEGEGATVCPLLLTASEGGLEGGIVSSRTLGW 570          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A835YYC0_9STRA (Phosphomevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC0_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 2.880e-134
Identity = 256/558 (45.88%), Postives = 327/558 (58.60%), Query Frame = 1
Query:    7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAA-ASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTC 1677
            VSAPGKVL+ GGYLVL++PN G+VL  TARF T+  W       LL   +++  S  Q L I V+SPQF   Y+Y C F   G LP L     Q SN++VE TL YV+ +L  E   ++ +              + IKL ADNDFYSQ +QL+ARGLP T+EALA+LP F+ CP + DG + V+KTGMGSSAA+ +SLVGALL  F AV LP  D P        +  A+ +  +G            + + HNLAQACH  AQGK+GSGFDV+AA+YGTH+YTRFSP+ L D LSA D      D           R+   V A   WD +R  + LP  F LLMGDV GGSSTPSMV+ V  WR   +T   + DLW  L   N +I E L  L+    S S +++  S     + L+ +P+ + G   S    +L         +L+ +F + R LLREMG+ AGVPIEPP QT L +AT ALPGVLC+GVPGAGGVDA++AIVVHP+A   V+DLWASW        +  +   VCPLLL A+   L  G+ C
Sbjct:   16 VSAPGKVLLTGGYLVLEQPNSGIVLGTTARFHTTTCWERYAPLCLL---LQQTSSHTQNLAITVDSPQFRQQYYYTCSFPPAGVLPVLSPKTGQPSNVYVECTLKYVMAFLATEMAEQQLS------------GVLHIKLEADNDFYSQTAQLQARGLPVTAEALASLPTFLPCP-TVDGHLQVSKTGMGSSAAMITSLVGALLVTFHAVELPSADTP-------TICDASGNVVEG------------MRIVHNLAQACHAAAQGKIGSGFDVAAAVYGTHVYTRFSPTVLADVLSATDGEEGVGD-----------RLRFAVVATQ-WDLKREPIHLPQGFCLLMGDVQGGSSTPSMVKSVLKWRAAESTKDSSADLWGKLAQVNNSIRELLQELSGLDGSGSSSSNSLSAAATYQHLSLLPSHQRGSVSSTASSSL--------CKLRDAFVQMRALLREMGDAAGVPIEPPEQTALANATAALPGVLCSGVPGAGGVDAIYAIVVHPSAASAVQDLWASWQTVSSTGTTDAQRPAVCPLLLRATGAALGDGIVC 518          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A067BR68_SAPPC (Phosphomevalonate kinase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR68_SAPPC)

HSP 1 Score: 298 bits (764), Expect = 3.550e-90
Identity = 218/560 (38.93%), Postives = 292/560 (52.14%), Query Frame = 1
Query:    7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVL----GYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNR-APAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
            VSAPGKVL+AGGYLVL+    G VLAA++RF T+V          L ASV    +P   L + V SPQFH V     V   D        SP+  +N +VE+TL        G L    GA+ A++    +        + I L ADNDFYSQ +QL  RG P T E LA LP F+ CP+   GT ++AKTGMGSSAAL +SLVGA+L FFGAV LP                          T   +  +  + + H+LAQ  H +AQ K+GSGFDVSAA YG   Y RFSP ++        S V+ ++++  APA      +AAC+++   WD       LP    ++MGDV  GS+T SMVR+V AW++       A  LW +L + N+ I     +L A A           +D    LA  P++ W          L+ V    LL ++++F + R LLR MG  AGV IEP  QT LIDAT  +PGVL  GVPGAGG DA+FA+V+HP+    V+  W++W+  +           V  LL+  +K  +QGG+
Sbjct:   10 VSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTVS---------LDASV----TPSPALAVTVHSPQFHQVL--TGVLSADA----FELSPQSPANPYVEKTLQVCAKALHGLLGPAFGAKLASLAKTHS--------LRITLEADNDFYSQSAQLLERGQPVTREHLAKLPAFLPCPLDASGTPVIAKTGMGSSAALITSLVGAVLRFFGAVTLP--------------------------TAQSAAATPGVDIVHHLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFSPERV-------QSFVAQKNLSAIAPAD-----LAACIQSR--WDNVVKAFGLPHNMHMIMGDVNAGSATVSMVRQVLAWKKADPAGSHA--LWETLNAKNMQIVAQFEALPAVA-----------DDVWARLAEAPSTSWVH--------LNAVLGAALLAMRATFEEIRHLLRTMGSAAGVAIEPEEQTALIDATMRVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVETFWSTWTATR-----------VSALLVDVAKSGVQGGL 470          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A7S2LKP2_9STRA (Phosphomevalonate kinase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKP2_9STRA)

HSP 1 Score: 302 bits (773), Expect = 8.990e-90
Identity = 235/604 (38.91%), Postives = 304/604 (50.33%), Query Frame = 1
Query:    4 TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFFTSVKWTE----EKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGR---------LPTLLASPEQAS---NIFVERTLSYVLGYLFREGGAERATMENAFTR---GQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNR--APAKTSLERIAACVR-APGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSA-TACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSF-----EDDAKVLASIPASEW-----GDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVH-PNAEGGVKD-----LWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW 1695
            +VSAPGK LVAGGYLVL+ PN GVVLAA   RF T++ + +     K   ++  S+       + + + V SPQF  ++ Y   +   G             L   P  AS   N FVERTL    GYL +  G E     + F +      E  A+AIKLRADNDFYSQI+ LK RGL  T + + +L  F+ CP   +G V+V KTGMGSSAAL +S+VGALL FFGA  LP ID  +  T    V   N+               E L + HNLAQ CHC AQGKVGSGFDVS+A++G+H+YTRFS   +   +   D  V N  +    + A+T   ++   V      WD     + LP    LLM DVCGGS +PSM RK+  W++ +  T   +   W  L   N  IA  L+              K F      D   ++AS  A +W              + DV    QLL L+ +F ++RQ L+ MG  AGVP+EP  QT L DAT  LPGV+ AGVPGAGG DA+F I V  P   GG  D     +   W     ++ S     VVCPL + A+     GG+ C   L W
Sbjct:   65 SVSAPGKALVAGGYLVLESPNPGVVLAADGCRFHTTIMFRQPCNTSKEGGVIGNSINATW---ESVPLDVYSPQFDKIFCYYLSYSLTGEDGDDSDDDGEDVLRLQPRTASYEPNKFVERTLLLAFGYLRQSLGKE--LFHSRFRQHGLNSNERVALAIKLRADNDFYSQINHLKQRGLDLTPQDVESLEPFLPCPKDSEGKVIVNKTGMGSSAALVTSIVGALLQFFGASSLPMIDGEMTET----VGQENQE--------------EGLRIAHNLAQICHCYAQGKVGSGFDVSSAVFGSHVYTRFSKGVINKFIE--DVEVRNETLKDGLSLAETDSSQLFELVTDIDKKWDCTVQPINLPEGLELLMADVCGGSESPSMARKILEWKKKNRETGFLSGYYWKDLKRCNKKIASLLSDQYTK---------KPFCNGLVRDGPLIIASRTAEQWKKPMPSTWHEFDGSSWDVA--MQLLDLRMAFLESRQNLKGMGTAAGVPVEPDSQTTLADATMKLPGVVAAGVPGAGGYDALFVIYVKGPPTNGGKSDQVRDDIGNLWRDLSNQDNST----VVCPLSVRAAG---SGGL-CASSLQW 624          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A1V9YNS4_9STRA (Phosphomevalonate kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNS4_9STRA)

HSP 1 Score: 292 bits (748), Expect = 7.590e-88
Identity = 218/559 (39.00%), Postives = 286/559 (51.16%), Query Frame = 1
Query:    7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVL----GYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
            VSAPGKVL+AGGYLVL+    G VLAA++RF T+V        +L + +V  AG     L + + SPQFH       V   D        SPE  +N +VE+TL        G L    GA  A++    +        + I L ADNDFYSQ SQL  RGLP T + LATLP F+ CP+  DG  ++ KTGMGSSAAL +SLVGA+L FFG+V LP               P + +S  G+             + HNLAQ  H +AQ K+GSGFDVSAA YG   Y RF P ++        + V  R++    A  S   +A C+ A   WD       LP   R++MGDV  GS+T SMVR+V AW+  SA    +  LW  L + N+AI     +L   +    A            LA+  ++ W           +V T  Q +Q  ++F + R LLR MG  AGV IEP  QT LIDAT  +PGVL  GVPGAGG DA+FA+V+HP+    V+  WA+W+              V  LL+  +K  +QGG+
Sbjct:    6 VSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTV--------SLAAPTVPTAG-----LAVVICSPQFHQTL--SGVLSAD----VFELSPESPANPYVEKTLQVCAKALHGLLGASFGANLASLSAEHS--------LLITLEADNDFYSQSSQLLERGLPVTRDNLATLPAFLPCPVDADGRAIIMKTGMGSSAALITSLVGAVLRFFGSVTLP--------------TPTSTTSSPGV------------DVVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFHPDRI-------KAFVGQRNL----ADLSAAELATCISAQELWDNVVKPFGLPPSMRMIMGDVNAGSATVSMVRQVLAWK--SADPVGSTALWEKLNAKNMAIVAQFEALPVVSPHVWAQ-----------LATTTSASWPQVHP------EVGTILQAMQ--ATFYEIRSLLRSMGTQAGVGIEPAEQTALIDATMQVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVEAFWATWTATP-----------VSALLVDVAKSGVQGGL 468          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A1V9Z1M7_9STRA (Phosphomevalonate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1M7_9STRA)

HSP 1 Score: 284 bits (727), Expect = 8.480e-85
Identity = 210/555 (37.84%), Postives = 281/555 (50.63%), Query Frame = 1
Query:    7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
            VSAPGKVL+AGGYLVL+    G VLAA++ F TSVK        L+  S E  GS    + + V SPQFH     +     +G       S E   N +VE+T+      L    GAE A           E  ++ I L ADNDFYSQ   L  RGL  T   LA LP F+ CP+++ G  ++ KTGMGSSAAL +SLVGA+L FF AV LP                          TT  S  +  + + HNLAQ  H +AQ K+GSGFDVSAA YG   Y RF P ++        S V+ ++++      S   +  C++    WD       +P    ++MGDV  GS+T SMVRKV AW+  SA    ++ LW SL + N+ I    +SL  A+           ++    LA+  +++W    +    AL        + ++++F + R LLREMG  AGVPIEP  QT LIDAT  LPGVL  GVPGAGG DA+FAIV+HP+    V+  W+ W+  +           V  LL+  +    QGG+
Sbjct:    4 VSAPGKVLIAGGYLVLEPLYAGAVLAASSCFHTSVK--------LIQKSTEILGSG---INVIVLSPQFHQTL--QGTLSENG----FTLSKESPQNPYVEKTMQVCAKALTGLLGAEFAQKLGKMA----EKHSLEITLEADNDFYSQSEHLVKRGLAMTRANLAQLPPFLPCPLNDQGQAIIMKTGMGSSAALITSLVGAILRFFDAVTLP--------------------------TTASSTTTAGVDIVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQRYNRFHPDRI-------QSFVAEKNLSNI----SASELTHCIKTQSLWDNVVKPFGIPPNMHMIMGDVNAGSATVSMVRKVLAWK--SADPKGSQTLWESLNAKNMQIISCFDSLPTAS-----------DEIWLRLAATTSAKWPSIHAQLGNAL--------VAMQTTFYEIRALLREMGNGAGVPIEPTEQTALIDATMQLPGVLFGGVPGAGGNDAIFAIVLHPSVLSQVETFWSKWTATR-----------VSALLVDVAPSGFQGGL 468          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: B8BYG3_THAPS (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYG3_THAPS)

HSP 1 Score: 292 bits (747), Expect = 8.610e-85
Identity = 222/595 (37.31%), Postives = 305/595 (51.26%), Query Frame = 1
Query:    4 TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFFTSVKWTEE----KASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVF------HTDGRLPTLLASPE-QASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPS---QLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDL-WSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKV-LASIPASEW-----GDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVH---------PNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW 1695
            TVSAPGKVL+AGGYLVL+ PN GVVLAA   RF T+V + +        TL   +V     P     + V SPQF  V+ Y   +        D  +      PE   SN FVER+L   L Y+ +  G +     +   +  + G A+AIKLRADNDFYSQI+ LK RGL  T + + +L  F+ CP  E G ++V KTG+GSSAAL +SLVGALLSFF  V LP   D                   G  + N     E L + HNL+Q CHC AQGKVGSGFDVS+A+YG+HIYTRFS +   + L+++ A        D+    ++   E +    +    WD     + LP    LLM D+CGGS +PSM +K+  W++++       D  W  L   N  I   +++  A  S +V    K  + D  V LAS  A +W              + D+    +LL L+ +F ++RQ L+ MG+ A VP+EP  QT L +AT  LPGV+ +GVPGAGG DA+F + V           +    + +LW  +S       ++    VVCPL + A+    + G+ C   L W
Sbjct:  193 TVSAPGKVLIAGGYLVLESPNPGVVLAAKGCRFHTTVMFRQPFNIGVGDTLGLNAVGMESIP-----LDVYSPQFDKVFSYRLSYLLGSQDDDDVAIRLQPRHPETHTSNKFVERSLLLALSYIQQSIGLQE--FHSKLRQQDDNGGALAIKLRADNDFYSQITHLKQRGLDLTPKNIESLEPFLPCPKDEMGNLVVNKTGLGSSAALVTSLVGALLSFFDVVSLPVTKD------------------GGTNSNNKELHEEGLRIAHNLSQICHCHAQGKVGSGFDVSSAVYGSHIYTRFSENVINRFLESVDAQKGFEGGLDLTGILSQQLRELVNDTTKE---WDCAVTPISLPQGLELLMADICGGSESPSMAKKILEWKKNNRKVGFLDDYYWKDLKRCNNKIVSLISNQLA--SQTVL---KGLQRDGPVILASRTAEQWKKPMPSSWHEFEGSSWDIAG--KLLDLRMAFMESRQNLKGMGKAADVPVEPDEQTNLANATMKLPGVVASGVPGAGGYDALFVVYVKGTVTCVDKSDSVRDNIANLWRDFS-------NQNDTTVVCPLSVKAAGFGGENGL-CASALRW 744          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: K0TGY4_THAOC (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGY4_THAOC)

HSP 1 Score: 290 bits (743), Expect = 1.870e-84
Identity = 226/580 (38.97%), Postives = 300/580 (51.72%), Query Frame = 1
Query:    4 TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFFTSVKWTE---EKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDG--RLP--TLLASPEQAS---NIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGS-AIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQL---LDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDL-WSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAK-----VLASIPASEW-----GDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVH-PNAEGGVKDLWASWSVCKGEER--SKGRIGVVCPLLLTASKGD 1656
            TVSAPGK LVAGGYLVL++PN G+VLAA+  RF TS+ +      + ST++ AS+  A S    + + + SPQF  V+ Y   +  +G   +P   L   P +A    N FVER+L   LGYL R+    +A  E         G  A+AIKLRADNDFYSQI+ LK RGL  T   LA L  F+ CP    G ++V KTGMGSSAAL +SLVGALL+FFGA+ +                  +  + DG+         E L L HNLAQ  HC AQGKVGSGFDVSAA+YG+H+YTRFS + +   L++LS+ +      +  +     S + +     +   WD     + LP    LLM DVCGGS +PSM RK+  W+          D  W  L   N  IA  L +             ++F D  +     +L++  A +W              + DV    +LL L+ S  +ARQ L+ MG  A VP+EP  Q+ L + T  LPGV+ AGVPGAGG DA+F + V  P    G  D     S+C   +R   +     VCPL + AS  D
Sbjct:  173 TVSAPGKALVAGGYLVLEQPNPGLVLAASGCRFHTSITFRPPHTSQVSTVIGASINAAWSS---IPLDIYSPQFDKVFSYYLSYSMNGDQNVPESVLELQPRKAPHEPNKFVERSLLLSLGYL-RQSLGPKAFHERLHPMNSNGGRVALAIKLRADNDFYSQIAALKDRGLDLTPSNLAALEPFLPCPKDATGKLVVNKTGMGSSAALVTSLVGALLTFFGAISI------------------SEPTDDGVKQQ------EGLRLAHNLAQISHCYAQGKVGSGFDVSAAVYGSHVYTRFSKTIIHPFLESLSSANEG----EALQLTGTLSRDLVRLVDDSDRAWDCTVHPVALPPGLELLMADVCGGSESPSMARKILDWKRSKRRTGFMDDYYWKDLKRVNAKIARLLTTTFKE---------QTFLDGLERDGPVILSTRTAEQWKKPMPSSWHEFEGSSWDVAL--KLLDLRMSILEARQNLKGMGNAASVPVEPAEQSLLANETMKLPGVVAAGVPGAGGYDALFVVYVEGPKTNDGSSDHVRD-SICSLWKRISEENSATTVCPLSVRASGID 708          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A6G0X5S9_9STRA (Phosphomevalonate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5S9_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.260e-83
Identity = 208/556 (37.41%), Postives = 274/556 (49.28%), Query Frame = 1
Query:    7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLP-TLLASPEQASNIFVERTLSYVLGYLFREGGAERATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGV 1671
            VSAPGKVL+ GGYLVL+    G V+AA++RF T+V          L    E   +    + ++V SPQFH            GRL  T     +   N +VE+T+   +  L   G     +        +     IAI L ADNDFYSQ  QL+ RGL  + + LATLP+F+   + + G   +AKTGMGSSAAL +SLVGALL FF A  +P            + A  + ++  G+             + HNLAQ CH +AQ K+GSGFDVSAA YG   YTRF P  +   L+ G                +++ +A   R    WD       LP    ++MGDV  GS+T SMVRKV AW+        A  LW +L + N AI      +AA  S S         +  + L+ +PASEW         A D      L+ L+ +F   R  LREMG  AGVPIEP  QT LIDAT  +PGVL AGVPGAGG DA+FAIV+H +    V+  W++W+              V  LL+ A+    QGG+
Sbjct:    3 VSAPGKVLITGGYLVLEPEFSGAVIAASSRFHTTVS---------LEPLDESNQANEDGVAVRVRSPQFHQTM--------HGRLTATAFHFTDATENPYVEKTIHVCVAAL--SGLLGHDSFAARIEEIRRANQCIAITLEADNDFYSQREQLERRGLHVSRKHLATLPRFLPSLLDDAGRAKIAKTGMGSSAALITSLVGALLGFFNAADIP------------STAHDDENTRKGV------------QIVHNLAQICHSIAQEKIGSGFDVSAASYGNQRYTRFRPDGIQAFLNGG----------------AIDPVALAARIAAPWDNIVRPFCLPEGMHMIMGDVNAGSATVSMVRKVLAWKTADPEGSAA--LWKALNAKNEAIPAGFERIAAHLSQS---------NSLEALSRLPASEWT--------AADATVGALLVDLRQTFVDVRSHLREMGTLAGVPIEPADQTALIDATMQVPGVLFAGVPGAGGNDAIFAIVLHESVLDKVEQFWSTWTATS-----------VSALLVDAAPNGWQGGL 469          
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Match: A0A485KV08_9STRA (Phosphomevalonate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KV08_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.760e-83
Identity = 224/565 (39.65%), Postives = 286/565 (50.62%), Query Frame = 1
Query:    7 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFFTSVKWTEEKASTLLSASVEEAGSPRQLLRIKVESPQFHCVYWYECVFHTDGRLPTLLASPEQASNIFVERTLSYVLGYLFREGGAER--ATMENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQFMECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPLTEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSGFDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIAACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSATACRAKDLWSSLGSTNIAIAEALNSL----AAAASSSVAASGKSFEDDAKVLASIPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPIEPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWASWSVCK-GEERSKGRIGVV---CPLLLTASKGDLQGGV 1671
            VSAPGKVL+AGGYLVL+    G VLAA++RF T+V      A+T  S            + +++ SPQFH         H +    T   + E A+N +VE+T+   +  L    GA    A +++   R Q     + I L ADNDFYSQ  QL+ RGL  +   L TLP F+     + G   +AKTGMGSSAAL +SLVGAL+ FFGA  LP                  R+  D  ATT        L L HNLAQ CH +AQ K+GSGFDVSAA YG   Y RF P  L+ A    +S            +     +AAC+ +   WD       LP    ++MGDV  GS+T SMVRKV AW++       A  LW++L + N AI   L  L    AAA S + AAS         VLA+    EW  T        D V    L+ L+ +F   R+LLR MG+ AGVPIEP  QT LIDAT  +PGVL AGVPGAGG DA+FAIV+       V+  W +W+    G  R  G  G V     +L+  +    QGG+
Sbjct:    3 VSAPGKVLIAGGYLVLEPELSGAVLAASSRFHTTVDVASLDATTSTS-----------FVPVRIHSPQFHQT------MHGELIATTFRFTKESAANPYVEKTIRVCVAALVGLLGATAFSARVQDMLDRRQ----CLMITLEADNDFYSQRDQLQRRGLSVSRANLKTLPAFLPSLQDDAGAAKIAKTGMGSSAALITSLVGALVGFFGAAALP-----------------TRTHHD--ATTRAG-----LDLVHNLAQLCHSIAQEKIGSGFDVSAASYGNQRYNRFRPD-LIQAFLGDES------------ECDPTALAACLTS--SWDNLVRPFTLPDGMHMIMGDVNAGSATVSMVRKVLAWKQTDPAGSAA--LWATLNAKNDAIPTQLAQLHATTAAAGSGAAAAS-------LAVLATKSHMEWVAT--------DAVVGPLLVSLRDTFLDIRRLLRRMGDAAGVPIEPADQTALIDATMDVPGVLFAGVPGAGGNDAIFAIVLDAAVLDRVEAFWGTWTATSCGHWREMGANGCVYRVSAMLVDVAPNGWQGGL 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5879.13376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ8_ECTSI9.610e-24166.14Phosphomevalonate kinase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YYC0_9STRA2.880e-13445.88Phosphomevalonate kinase n=1 Tax=Tribonema minus T... [more]
A0A067BR68_SAPPC3.550e-9038.93Phosphomevalonate kinase n=3 Tax=Saprolegnia TaxID... [more]
A0A7S2LKP2_9STRA8.990e-9038.91Phosphomevalonate kinase n=1 Tax=Skeletonema marin... [more]
A0A1V9YNS4_9STRA7.590e-8839.00Phosphomevalonate kinase n=1 Tax=Achlya hypogyna T... [more]
A0A1V9Z1M7_9STRA8.480e-8537.84Phosphomevalonate kinase n=1 Tax=Thraustotheca cla... [more]
B8BYG3_THAPS8.610e-8537.31GHMP_kinases_N domain-containing protein n=1 Tax=T... [more]
K0TGY4_THAOC1.870e-8438.97GHMP_kinases_N domain-containing protein n=1 Tax=T... [more]
A0A6G0X5S9_9STRA1.260e-8337.41Phosphomevalonate kinase n=1 Tax=Aphanomyces eutei... [more]
A0A485KV08_9STRA1.760e-8339.65Phosphomevalonate kinase n=1 Tax=Aphanomyces stell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5879contigH-elongata_contig5879:3190..6996 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score537.7
Seed ortholog evalue5e-150
Seed eggNOG ortholog2880.D7FMZ8
Preferred nameERG8
KEGG rclassRC00002
KEGG koko:K00938
KEGG ReactionR03245
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00095
GOsGO:0003674,GO:0003824,GO:0004631,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0006066,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006696,GO:0006720,GO:0006721,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0010142,GO:0016114,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019287,GO:0019637,GO:0019693,GO:0031388,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0046165,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:0097384,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902767
EggNOG free text desc.phosphomevalonate kinase activity
EggNOG OGsCOG3890@1,KOG4519@2759
EC2.7.4.2
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphomevalonate kinase
Ec32 orthologEc-25_002910.1
Exons9
Model size2078
Cds size1329
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930953.6175895-UTR-H-elongata_contig5879:3189..33181622930953.6175895-UTR-H-elongata_contig5879:3189..3318Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 3190..3318 +
1691679638.6438856-UTR-H-elongata_contig5879:3189..33181691679638.6438856-UTR-H-elongata_contig5879:3189..3318Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 3190..3318 +
1622930953.6355095-UTR-H-elongata_contig5879:3607..37561622930953.6355095-UTR-H-elongata_contig5879:3607..3756Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 3608..3756 +
1691679638.654021-UTR-H-elongata_contig5879:3607..37561691679638.654021-UTR-H-elongata_contig5879:3607..3756Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 3608..3756 +
1622930953.654551-UTR-H-elongata_contig5879:3984..40751622930953.654551-UTR-H-elongata_contig5879:3984..4075Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 3985..4075 +
1691679638.6641464-UTR-H-elongata_contig5879:3984..40751691679638.6641464-UTR-H-elongata_contig5879:3984..4075Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 3985..4075 +
1622930953.8151038-UTR-H-elongata_contig5879:6616..69961622930953.8151038-UTR-H-elongata_contig5879:6616..6996Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 6617..6996 +
1691679638.7481356-UTR-H-elongata_contig5879:6616..69961691679638.7481356-UTR-H-elongata_contig5879:6616..6996Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5879 6617..6996 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930953.685705-CDS-H-elongata_contig5879:4075..41681622930953.685705-CDS-H-elongata_contig5879:4075..4168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 4076..4168 +
1691679638.6717389-CDS-H-elongata_contig5879:4075..41681691679638.6717389-CDS-H-elongata_contig5879:4075..4168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 4076..4168 +
1622930953.708721-CDS-H-elongata_contig5879:4399..44781622930953.708721-CDS-H-elongata_contig5879:4399..4478Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 4400..4478 +
1691679638.6816962-CDS-H-elongata_contig5879:4399..44781691679638.6816962-CDS-H-elongata_contig5879:4399..4478Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 4400..4478 +
1622930953.7258987-CDS-H-elongata_contig5879:4693..49591622930953.7258987-CDS-H-elongata_contig5879:4693..4959Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 4694..4959 +
1691679638.689288-CDS-H-elongata_contig5879:4693..49591691679638.689288-CDS-H-elongata_contig5879:4693..4959Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 4694..4959 +
1622930953.7427104-CDS-H-elongata_contig5879:5164..54491622930953.7427104-CDS-H-elongata_contig5879:5164..5449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 5165..5449 +
1691679638.7017314-CDS-H-elongata_contig5879:5164..54491691679638.7017314-CDS-H-elongata_contig5879:5164..5449Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 5165..5449 +
1622930953.7650661-CDS-H-elongata_contig5879:5613..57781622930953.7650661-CDS-H-elongata_contig5879:5613..5778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 5614..5778 +
1691679638.7168343-CDS-H-elongata_contig5879:5613..57781691679638.7168343-CDS-H-elongata_contig5879:5613..5778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 5614..5778 +
1622930953.7829766-CDS-H-elongata_contig5879:5964..61081622930953.7829766-CDS-H-elongata_contig5879:5964..6108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 5965..6108 +
1691679638.727572-CDS-H-elongata_contig5879:5964..61081691679638.727572-CDS-H-elongata_contig5879:5964..6108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 5965..6108 +
1622930953.8029013-CDS-H-elongata_contig5879:6319..66161622930953.8029013-CDS-H-elongata_contig5879:6319..6616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 6320..6616 +
1691679638.7368135-CDS-H-elongata_contig5879:6319..66161691679638.7368135-CDS-H-elongata_contig5879:6319..6616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5879 6320..6616 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5879.13376.1prot_H-elongata_contig5879.13376.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5879 4076..6616 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5879.13376.1

>prot_H-elongata_contig5879.13376.1 ID=prot_H-elongata_contig5879.13376.1|Name=mRNA_H-elongata_contig5879.13376.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=443bp
MENAFTRGQEEGSAIAIKLRADNDFYSQISQLKARGLPHTSEALATLPQF
MECPMSEDGTVMVAKTGMGSSAALTSSLVGALLSFFGAVHLPFIDDPLPL
TEKLAVAPANRSSPDGIATTNCSGLSESLALTHNLAQACHCVAQGKVGSG
FDVSAAIYGTHIYTRFSPSQLLDALSAGDSPVSNRDVNRAPAKTSLERIA
ACVRAPGGWDAERGVLRLPFCFRLLMGDVCGGSSTPSMVRKVQAWREDSA
TACRAKDLWSSLGSTNIAIAEALNSLAAAASSSVAASGKSFEDDAKVLAS
IPASEWGDTRSIGDGALDVVTFQQLLQLKSSFAKARQLLREMGEDAGVPI
EPPVQTELIDATCALPGVLCAGVPGAGGVDAVFAIVVHPNAEGGVKDLWA
SWSVCKGEERSKGRIGVVCPLLLTASKGDLQGGVTCTRKLSW*
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mRNA from alignment at H-elongata_contig5879:3190..6996+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5879.13376.1 ID=mRNA_H-elongata_contig5879.13376.1|Name=mRNA_H-elongata_contig5879.13376.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3807bp|location=Sequence derived from alignment at H-elongata_contig5879:3190..6996+ (Himanthalia elongata Himel1 dioecious)
AGCACTGTGTCGGCGCCTGGCAAGGTGCTTGTTGCCGGAGGATACCTCGT CCTGGATAGGCCAAATGTCGGCGTGGTGTTGGCAGCCACGGCGAGATTTT TTACTTCTGTGAAATGGACGGAAGAAAAGGTGAAAACTTGTTGGGTAGCC TCTGGTCACGATATCTCCTTGTAGCCACTGTAAGGCTGTAGAGCGCTGTA GGGTAGAGCGGAACGGCCGGAGGTGTGTGACCTTCTCTCAAGATACCCGA CATACCCGACAAGTGTTTGATCGCAGAGCGGTGGGAAGCCATGACCCAGC CACAGTCGTTGTTGTTTTTGTATCGTGATTGTGACAGGAAGGGATAGTAA TATGTGGTCAAGTGTGTATCTGGATCGTACACGAAAACTTCTACTGCTGT TTGTCAAATTACCCGCAGGCATCCACCCTTTTGTCGGCGTCTGTCGAGGA AGCGGGTTCTCCACGTCAGCTCCTTCGTATCAAGGTGGAAAGCCCTCAGT TCCACTGCGTGTATTGGTATGAGTGCGTCTTCCACACCGACGGCAGACTT CCGACACTTCTCGCCAGGTTAGGGAAGGAGCTAAATAAACGTCTTGGGAC GACTTCTGTAGTGTTGGGCTTATAGCTGTAATTGCTTCCGAGCACCTGTT CGAGTGAGTAGTCCATTATCTTTCATATCTCTTACAAAGGATAATTCGAA ACATTGCTGGTTCGGTGTTATATACACGATCGCACATGAACGTTAACCGT GTTGAGATCGGTTGCGGACCTCCCTGAATCTCTGTGGATCTCCAGTCCCG AGCAGGCTTCTAATATTTTTGTAGAACGGACTTTATCTTACGTTCTGGGC TATCTTTTCCGGGAGGGAGGCGCCGAACGCGCCACGATGGAGAATGCGTT CACCCGTGGGCAGGAGGAAGGTAGCGCCATTGCCATCAAGCTGCGAGCGG ACAACGACTTCTACTCCCAAATAAGTCAGGTCAGGTCAGGGTGACGAAAG GAGGCGGGGACAAGCCCCTTGGCATGTTTTTTTATAGCACTCAAACTTAA TTCCGGATCGTGTTTGAAGCCAACGACTTCACTATAATGGCTTATTTAAT TTTCCCCCGAAACGCCTTATTCCATCGGAAAGCTTGGTCTTCCCGTTTGG TAGTGTGTTCTAAATCTGTGCTCATCGCTCGACCAACTATGTCCGCTTGT CGTGGTTCAGCTCAAGGCTCGTGGACTACCACATACATCAGAAGCGCTCG CCACCCTCCCACAATTTATGGAATGCCCCATGTCGGAAGGTGAGCTTGCC AGAGCCGATTTTCGTCGACTAATGAGTAAAGTACATGTGCCGTAGCAAGC CCTGGCTAGAGCGACTAATCCATTTCTTTCAAGGCTTGTTTAGTTTTTTT TAATAATTCAATGGAATGCGCCAACATCGAGAAGCATCATTTCATTCCAT CACAGTGCCGTGTGTGTACGCTCTGTACCTGCTGTGTGCTTGTACGCTAA TCAGACGGTACCGTGATGGTGGCCAAGACTGGCATGGGGAGCTCCGCCGC CCTGACCTCCTCCTTGGTGGGAGCTCTTCTGTCTTTTTTCGGCGCCGTCC ATCTGCCTTTTATTGATGACCCTCTCCCCCTCACAGAGAAGCTAGCGGTT GCGCCAGCAAATCGCTCGTCTCCCGATGGAATCGCTACCACTAACTGTTC TGGACTGAGCGAGAGTTTGGCTCTGACACACAACCTAGCACAGGCGTGCC ATTGCGTGGCTCAAGGAAAGGTGTGCTGACTGACTGCAAAGGTAGATAAT TAGGAACGTAAAAGACCGCTCAACTCATGCCACCCTCTGTCCTTTAGTAT TTCCCCCTATCCTTCAGGATAACTCACGCATCTCAAACGATATTTTTCAT CGTGTTGGGGATACCTTTCGCATTTCGTACATCTCTCCAACTTGAGCAGC TGTCCTCTTGTCCATCCTCACACAGGTCGGCAGTGGCTTTGACGTCTCTG CCGCCATCTACGGCACCCATATATACACTAGGTTCTCCCCTAGTCAGCTT CTGGATGCCCTCTCTGCCGGCGACAGCCCGGTGTCTAACCGTGACGTAAA TCGAGCTCCAGCGAAGACCTCGCTCGAACGAATCGCCGCGTGTGTCCGTG CTCCCGGAGGATGGGATGCCGAGAGGGGGGTGTTGCGACTGCCTTTCTGC TTTCGCCTGCTAATGGGCGATGTTTGCGGGGGTTCATCCACGCCTTCAAT GGTCCGGAAGGTAAGCAATGGGCGAACCCTTGTATATGGCACAAAACACG CGTTACCCTAATCTTAGATATCTAGGACGAACTTCCATTATGTAATTCAG CCACCATGACGTGCTTCACGCCTGAAGTGTGTCCAAGGGCCACATAACTT GTGTAGCCCCTCTCAATGGCGCAGGTACAAGCTTGGCGTGAAGACTCAGC GACAGCATGTCGAGCCAAGGACTTGTGGTCAAGTCTTGGTTCGACCAATA TAGCCATAGCTGAGGCACTCAACTCCCTGGCGGCGGCAGCTTCATCTAGT GTTGCCGCGAGCGGCAAGAGCTTCGAAGATGACGCAAAGGTCTGGTGGGG TGAAGGAATCTAGTGTCTGCGCATCGTGATACACCAAGCGAGCGGTCAGC TGTAGTTGAGATAATCATAACCCGTTCGACTTTGTAGGTATACGATGATT TGATCTGATCTCTTGCATTCAAATACTCGAGGTCACTTTTACTCTTTCAC ACCGGCGTGTGCTGGGATATTGCAGGTACTGGCGAGTATTCCTGCGAGTG AGTGGGGTGACACAAGATCAATCGGGGATGGCGCGCTGGATGTAGTGACC TTCCAGCAGTTGTTACAGCTAAAGTCGTCATTTGCAAAAGCTCGCCAGCT CTTGCGTGAAATGGGAGAGGTGAGCAGGCTTTGGGGGCACAAGTAGAGGT CGCTCGAGGGTCTTTTCCTTTGACGCACGGTTGTTCCCATGGATGTGTAT GTTTCAAGTCGCTGGGATAATACTACATTTCGTACTGTAGTACCTACGAA GCACAGTTTCGATTGGTAACGTTGTCGCTATAGAGCCTGCTCATTCTTGA GACCTGCATCCGTTGCTACTTTCCCTCCAGGACGCTGGCGTGCCGATCGA GCCCCCGGTGCAGACAGAACTCATTGATGCCACTTGTGCCTTGCCGGGAG TGTTGTGCGCCGGAGTACCTGGTGCGGGGGGGGTAGACGCCGTGTTCGCG ATCGTCGTTCATCCCAACGCGGAGGGAGGAGTTAAGGACTTATGGGCGAG CTGGTCGGTATGTAAGGGGGAAGAAAGGAGCAAAGGCAGAATTGGGGTGG TCTGTCCCCTTCTGTTGACGGCGTCAAAAGGAGACCTCCAGGGTGGAGTA ACATGTACACGGAAGCTCTCTTGGTAATACTTGATTGTGAGTTGTTCCAT CATTGGTGGCCCCGGTGCTAAAGGATAGTCGCCGAATCGCCAAACTAAAT AAGTTGCAAATCTTCTGAAGGAAGTCCATAACCTTTGACACGACACTGTC GCTTCAAGCCTTCTTTTCCATCCTTCCTGCGTGTCGACCTTCAAGACGTG TACCATCGTATGGATCAAACACATCCGTTTGTAAGGCCTACTTTTCTTTC TAGCTACAGCGCACGACACTCACTAGTCGAAGGCATCCGTGCCACGACTT CCACATCCGAGAGAAGTCACGTGTCGGTTTCTTGGCAACCAACTTAGTGC TCCTGCGGGCTGGTGGCTGGCGAGAAAGCCGCTTCTCTATCACCCACCGT GTCAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig5879:3190..6996+

>mRNA_H-elongata_contig5879.13376.1 ID=mRNA_H-elongata_contig5879.13376.1|Name=mRNA_H-elongata_contig5879.13376.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2658bp|location=Sequence derived from alignment at H-elongata_contig5879:3190..6996+ (Himanthalia elongata Himel1 dioecious)
ATGGAGAATGCGTTCACCCGTGGGCAGGAGGAAGGTAGCGCCATTGCCAT
CAAGCTGCGAGCGGACAACGACTTCTACTCCCAAATAAGTCAGATGGAGA
ATGCGTTCACCCGTGGGCAGGAGGAAGGTAGCGCCATTGCCATCAAGCTG
CGAGCGGACAACGACTTCTACTCCCAAATAAGTCAGCTCAAGGCTCGTGG
ACTACCACATACATCAGAAGCGCTCGCCACCCTCCCACAATTTATGGAAT
GCCCCATGTCGGAAGCTCAAGGCTCGTGGACTACCACATACATCAGAAGC
GCTCGCCACCCTCCCACAATTTATGGAATGCCCCATGTCGGAAGACGGTA
CCGTGATGGTGGCCAAGACTGGCATGGGGAGCTCCGCCGCCCTGACCTCC
TCCTTGGTGGGAGCTCTTCTGTCTTTTTTCGGCGCCGTCCATCTGCCTTT
TATTGATGACCCTCTCCCCCTCACAGAGAAGCTAGCGGTTGCGCCAGCAA
ATCGCTCGTCTCCCGATGGAATCGCTACCACTAACTGTTCTGGACTGAGC
GAGAGTTTGGCTCTGACACACAACCTAGCACAGGCGTGCCATTGCGTGGC
TCAAGGAAAGACGGTACCGTGATGGTGGCCAAGACTGGCATGGGGAGCTC
CGCCGCCCTGACCTCCTCCTTGGTGGGAGCTCTTCTGTCTTTTTTCGGCG
CCGTCCATCTGCCTTTTATTGATGACCCTCTCCCCCTCACAGAGAAGCTA
GCGGTTGCGCCAGCAAATCGCTCGTCTCCCGATGGAATCGCTACCACTAA
CTGTTCTGGACTGAGCGAGAGTTTGGCTCTGACACACAACCTAGCACAGG
CGTGCCATTGCGTGGCTCAAGGAAAGGTCGGCAGTGGCTTTGACGTCTCT
GCCGCCATCTACGGCACCCATATATACACTAGGTTCTCCCCTAGTCAGCT
TCTGGATGCCCTCTCTGCCGGCGACAGCCCGGTGTCTAACCGTGACGTAA
ATCGAGCTCCAGCGAAGACCTCGCTCGAACGAATCGCCGCGTGTGTCCGT
GCTCCCGGAGGATGGGATGCCGAGAGGGGGGTGTTGCGACTGCCTTTCTG
CTTTCGCCTGCTAATGGGCGATGTTTGCGGGGGTTCATCCACGCCTTCAA
TGGTCCGGAAGGTCGGCAGTGGCTTTGACGTCTCTGCCGCCATCTACGGC
ACCCATATATACACTAGGTTCTCCCCTAGTCAGCTTCTGGATGCCCTCTC
TGCCGGCGACAGCCCGGTGTCTAACCGTGACGTAAATCGAGCTCCAGCGA
AGACCTCGCTCGAACGAATCGCCGCGTGTGTCCGTGCTCCCGGAGGATGG
GATGCCGAGAGGGGGGTGTTGCGACTGCCTTTCTGCTTTCGCCTGCTAAT
GGGCGATGTTTGCGGGGGTTCATCCACGCCTTCAATGGTCCGGAAGGTAC
AAGCTTGGCGTGAAGACTCAGCGACAGCATGTCGAGCCAAGGACTTGTGG
TCAAGTCTTGGTTCGACCAATATAGCCATAGCTGAGGCACTCAACTCCCT
GGCGGCGGCAGCTTCATCTAGTGTTGCCGCGAGCGGCAAGAGCTTCGAAG
ATGACGCAAAGGTACAAGCTTGGCGTGAAGACTCAGCGACAGCATGTCGA
GCCAAGGACTTGTGGTCAAGTCTTGGTTCGACCAATATAGCCATAGCTGA
GGCACTCAACTCCCTGGCGGCGGCAGCTTCATCTAGTGTTGCCGCGAGCG
GCAAGAGCTTCGAAGATGACGCAAAGGTACTGGCGAGTATTCCTGCGAGT
GAGTGGGGTGACACAAGATCAATCGGGGATGGCGCGCTGGATGTAGTGAC
CTTCCAGCAGTTGTTACAGCTAAAGTCGTCATTTGCAAAAGCTCGCCAGC
TCTTGCGTGAAATGGGAGAGGTACTGGCGAGTATTCCTGCGAGTGAGTGG
GGTGACACAAGATCAATCGGGGATGGCGCGCTGGATGTAGTGACCTTCCA
GCAGTTGTTACAGCTAAAGTCGTCATTTGCAAAAGCTCGCCAGCTCTTGC
GTGAAATGGGAGAGGACGCTGGCGTGCCGATCGAGCCCCCGGTGCAGACA
GAACTCATTGATGCCACTTGTGCCTTGCCGGGAGTGTTGTGCGCCGGAGT
ACCTGGTGCGGGGGGGGTAGACGCCGTGTTCGCGATCGTCGTTCATCCCA
ACGCGGAGGGAGGAGTTAAGGACTTATGGGCGAGCTGGTCGGTATGTAAG
GGGGAAGAAAGGAGCAAAGGCAGAATTGGGGTGGTCTGTCCCCTTCTGTT
GACGGCGTCAAAAGGAGACCTCCAGGGTGGAGTAACATGTACACGGAAGC
TCTCTTGGTAAGACGCTGGCGTGCCGATCGAGCCCCCGGTGCAGACAGAA
CTCATTGATGCCACTTGTGCCTTGCCGGGAGTGTTGTGCGCCGGAGTACC
TGGTGCGGGGGGGGTAGACGCCGTGTTCGCGATCGTCGTTCATCCCAACG
CGGAGGGAGGAGTTAAGGACTTATGGGCGAGCTGGTCGGTATGTAAGGGG
GAAGAAAGGAGCAAAGGCAGAATTGGGGTGGTCTGTCCCCTTCTGTTGAC
GGCGTCAAAAGGAGACCTCCAGGGTGGAGTAACATGTACACGGAAGCTCT
CTTGGTAA
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