mRNA_H-elongata_contig57924.13266.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: D8LDX4_ECTSI (Fumarate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX4_ECTSI) HSP 1 Score: 328 bits (842), Expect = 9.160e-109 Identity = 168/196 (85.71%), Postives = 178/196 (90.82%), Query Frame = 1
Query: 4 GYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
GYD++IAALI+EET LPFVTA NKFEALA HDSIVEASGALNT+ACSLMKIANDIRFLGSGPRCGLGEL+LPENEPG SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVM ANLLSSMRLLGD C+SFA+RCVSG ANR+RIQEIMS+SLMLVTALNPKIGYDNASKV +
Sbjct: 258 GYDEEIAALIAEETNLPFVTAPNKFEALAGHDSIVEASGALNTLACSLMKIANDIRFLGSGPRCGLGELSLPENEPG----------SSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMVANLLSSMRLLGDSCSSFAERCVSGTVANRDRIQEIMSTSLMLVTALNPKIGYDNASKVAK 443
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: A0A7S3XU16_HETAK (Fumarate hydratase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU16_HETAK) HSP 1 Score: 297 bits (761), Expect = 1.520e-98 Identity = 150/197 (76.14%), Postives = 169/197 (85.79%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+GYD IAALI+EETG PFVTA NKFEALAAHD++VE SGA++ +A SLMKIANDIRFLGSGPR GLGELNLPENEPG SSIMPGK+NPTQCEALTMV AQVMGNHVA+TVGGSNGHFELNVFKPVM ANLLSS++L+GD C SF+ CV GI+AN E+I E+MS+SLMLVTALNPKIGYDNA+KV +
Sbjct: 93 EGYDVAIAALIAEETGYPFVTAENKFEALAAHDAVVECSGAMSVLAASLMKIANDIRFLGSGPRSGLGELNLPENEPG----------SSIMPGKINPTQCEALTMVAAQVMGNHVAITVGGSNGHFELNVFKPVMIANLLSSIQLIGDACRSFSRNCVVGIQANTEKINELMSNSLMLVTALNPKIGYDNAAKVAK 279
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: A0A5D6XXM5_9STRA (Fumarate hydratase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXM5_9STRA) HSP 1 Score: 301 bits (770), Expect = 9.300e-98 Identity = 150/196 (76.53%), Postives = 169/196 (86.22%), Query Frame = 1
Query: 4 GYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
GYD +IAA+I++ETGLPFVTA NKFEALAAHD++VEASGA+NT+ACS+MKIANDIRFLGSGPR GLGEL LP NEPG SSIMPGKVNPTQCEA+TMVCAQVMGNHVAVTVGG+NGHFELNVFKPVM +NLLSS+RLLGD +F D CV GIEANR+ I ++M +SLMLVTALNP IGYDNASKV +
Sbjct: 271 GYDAEIAAIIADETGLPFVTAPNKFEALAAHDAVVEASGAMNTIACSIMKIANDIRFLGSGPRSGLGELTLPANEPG----------SSIMPGKVNPTQCEAITMVCAQVMGNHVAVTVGGANGHFELNVFKPVMISNLLSSIRLLGDSAVAFTDNCVVGIEANRDTIDKLMKNSLMLVTALNPHIGYDNASKVAK 456
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: A0A2D4BP08_PYTIN (Fumarate hydratase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BP08_PYTIN) HSP 1 Score: 300 bits (768), Expect = 1.110e-97 Identity = 149/197 (75.63%), Postives = 170/197 (86.29%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+GYDK+IAA+I++ETG PFVTA NKFEALAAHD++VEASGA+NT+ACS+MKIANDIRFLGSGPR GLGEL LP NEPG SSIMPGKVNPTQCEA+TMVCAQVMGNHVAV+VGGSNGHFELNVFKPVM +NLLSS+RLLGD +F D CV GIEANR+ I ++M +SLMLVTALNP IGYDNA+KV +
Sbjct: 252 KGYDKEIAAIIAQETGYPFVTAPNKFEALAAHDAVVEASGAMNTIACSIMKIANDIRFLGSGPRSGLGELTLPANEPG----------SSIMPGKVNPTQCEAITMVCAQVMGNHVAVSVGGSNGHFELNVFKPVMISNLLSSIRLLGDSAVAFTDNCVVGIEANRDTIDKLMKNSLMLVTALNPHIGYDNAAKVAK 438
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: W2Q158_PHYPN (Fumarate hydratase n=23 Tax=Peronosporaceae TaxID=4777 RepID=W2Q158_PHYPN) HSP 1 Score: 300 bits (767), Expect = 7.030e-97 Identity = 148/197 (75.13%), Postives = 169/197 (85.79%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+GYD +IA +I++ET LPF+TA NKFEALAAHD++VEASGA+NT+ACSLMKIANDIRFLGSGPR GLGEL LP NEPG SSIMPGKVNPTQCEA+TMVCAQVMGNHVAVTVGGSNGHFELNVFKPVM +NLLSS+RL+GD C +F D C+ GIEANRE+I ++M +SLMLVTALNP IGYD ASKV +
Sbjct: 305 KGYDAEIAKIIADETKLPFITAPNKFEALAAHDAVVEASGAMNTIACSLMKIANDIRFLGSGPRSGLGELTLPANEPG----------SSIMPGKVNPTQCEAITMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMISNLLSSIRLIGDSCNAFTDNCIVGIEANREKIDQLMKNSLMLVTALNPHIGYDKASKVAK 491
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: T0RV02_SAPDV (Fumarate hydratase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0RV02_SAPDV) HSP 1 Score: 298 bits (763), Expect = 8.160e-97 Identity = 149/197 (75.63%), Postives = 169/197 (85.79%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+GYDK+IAA+I+ ETG PFVTA NKFEALAA+D++VEASGA+NT+ACSLMKIANDIRFLGSGPR GLGELNLP NEPG SSIMPGKVNPTQCEA+TMVCAQV+GNHVAVTVGGSNGHFELNVFKPVM +NL+SS+RL+GD CA+F D CV GIEAN + I +M +SLMLVTALN IGYDNASKV +
Sbjct: 261 KGYDKEIAAIIAAETGFPFVTAPNKFEALAANDAVVEASGAMNTIACSLMKIANDIRFLGSGPRSGLGELNLPANEPG----------SSIMPGKVNPTQCEAITMVCAQVIGNHVAVTVGGSNGHFELNVFKPVMISNLISSVRLIGDSCAAFTDNCVVGIEANLDTIDRLMKNSLMLVTALNSHIGYDNASKVAK 447
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: A0A830CY19_9LAMI (Fumarate hydratase n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CY19_9LAMI) HSP 1 Score: 297 bits (760), Expect = 1.500e-96 Identity = 149/197 (75.63%), Postives = 167/197 (84.77%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+G+D KIAA +++ET LPFVTA NKFEALAAHD+ VE SGALNT+A SLMKIANDIRFLGSGPRCGLGEL LPENEPG SSIMPGKVNPTQCEALTMVCAQVMGNHV +TVGGSNGHFELNVFKPV+A+NLL S+RLLGD CASF CV GI+ANRERI +++ SLMLVT+LNPKIGYDNA+ V +
Sbjct: 245 KGFDVKIAAAVADETNLPFVTAENKFEALAAHDAFVETSGALNTIAVSLMKIANDIRFLGSGPRCGLGELILPENEPG----------SSIMPGKVNPTQCEALTMVCAQVMGNHVTITVGGSNGHFELNVFKPVIASNLLHSLRLLGDACASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAALVAK 431
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: A0A485LLZ0_9STRA (Fumarate hydratase n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LLZ0_9STRA) HSP 1 Score: 296 bits (759), Expect = 3.460e-96 Identity = 149/197 (75.63%), Postives = 168/197 (85.28%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+GYDK+IAA+I++ET LPFVTA NKFEALAA+D++VEASGALNT+ACSLMKIANDIRFLGSGPR GLGELNLP NEPG SSIMPGKVNPTQCEA+TMVCAQVMGNHVAVTVGGSNGHFELNVFKPVM +NL+SS+RL+GD +F D CV GIEANRE I +M +SLMLVT+LNP IGYD ASK +
Sbjct: 263 KGYDKEIAAIIADETKLPFVTAPNKFEALAANDAVVEASGALNTIACSLMKIANDIRFLGSGPRSGLGELNLPANEPG----------SSIMPGKVNPTQCEAITMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMISNLISSIRLIGDSAVAFTDNCVVGIEANRETIDRLMKNSLMLVTSLNPYIGYDKASKAAK 449
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: UPI001CC67AD1 (fumarate hydratase 1, mitochondrial isoform X4 n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI001CC67AD1) HSP 1 Score: 291 bits (746), Expect = 3.590e-96 Identity = 147/197 (74.62%), Postives = 166/197 (84.26%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+G+D KIAA ++EET LPFVTA NKFEALAAHD+ VE+SGALNT+A SLMKIAND+RFLGSGPRCGLGEL LPENEPG SSIMPGKVNPTQCEALTM CAQVMGNHVA+TVGGSNGHFELNVFKP++A+NLL S RLLGD ASF CV GI+AN+ERI +++ SLMLVTALNPKIGYDNA+ V +
Sbjct: 114 KGFDAKIAAAVAEETKLPFVTAENKFEALAAHDAFVESSGALNTIATSLMKIANDMRFLGSGPRCGLGELVLPENEPG----------SSIMPGKVNPTQCEALTMACAQVMGNHVAITVGGSNGHFELNVFKPMIASNLLHSTRLLGDASASFEKNCVKGIQANKERISKLLHESLMLVTALNPKIGYDNAAAVAK 300
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Match: A0A836CH65_9STRA (Fumarate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH65_9STRA) HSP 1 Score: 296 bits (757), Expect = 4.130e-96 Identity = 151/197 (76.65%), Postives = 165/197 (83.76%), Query Frame = 1
Query: 1 QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMKIANDIRFLGSGPRCGLGELNLPENEPGEEFEFDIKLRSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVMAANLLSSMRLLGDGCASFADRCVSGIEANRERIQEIMSSSLMLVTALNPKIGYDNASKVGQ 591
+GYD +IAALI++ETG PFVTA NKFEALAAHDS+VEASGA+NT+ACSLMKIANDIRFLGSGPRCGLGEL+LPENEPG SSIMPGKVNPTQCEA+TMV AQVMGNHVA+TV GS GHFELNVFKPVM ANLL SMRL+GD FAD CV+GI AN RI IM +SLMLVTALNP IGYD ASKV +
Sbjct: 241 EGYDVEIAALIAKETGYPFVTAPNKFEALAAHDSVVEASGAMNTIACSLMKIANDIRFLGSGPRCGLGELSLPENEPG----------SSIMPGKVNPTQCEAITMVAAQVMGNHVAITVSGSQGHFELNVFKPVMIANLLVSMRLVGDSARCFADNCVAGIAANEARITAIMQTSLMLVTALNPHIGYDKASKVAK 427 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57924.13266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57924.13266.1 >prot_H-elongata_contig57924.13266.1 ID=prot_H-elongata_contig57924.13266.1|Name=mRNA_H-elongata_contig57924.13266.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp QGYDKKIAALISEETGLPFVTAANKFEALAAHDSIVEASGALNTVACSLMback to top mRNA from alignment at H-elongata_contig57924:65..2458- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57924.13266.1 ID=mRNA_H-elongata_contig57924.13266.1|Name=mRNA_H-elongata_contig57924.13266.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2394bp|location=Sequence derived from alignment at H-elongata_contig57924:65..2458- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57924:65..2458- >mRNA_H-elongata_contig57924.13266.1 ID=mRNA_H-elongata_contig57924.13266.1|Name=mRNA_H-elongata_contig57924.13266.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig57924:65..2458- (Himanthalia elongata Himel1 dioecious)back to top |