mRNA_H-elongata_contig11700.1325.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11700.1325.1
Unique NamemRNA_H-elongata_contig11700.1325.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 4.500e-118
Identity = 232/534 (43.45%), Postives = 287/534 (53.75%), Query Frame = 1
Query:    4 VAERASFDAAEA-------NGEGVNDGVFLPPLPPPRELLLPCPPNLDKAGRTELHGVFRVYMPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGND-LTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVH 1581
            VA R +FDA E        +G G    V LPP  PPR+++L CPP+LDKAGRTE+HG FR +M Y  T AIMP +     GG    G+      ND   Y EVS +    KSR +WPKGRGEYLEFSVYKAGRST E A+A+C+ L + R RLSYAGAKDRRALTAQKMRCWRLPAE +HEA A G+ + +G+A+SDYR+V+    LG L+GNHF+VLLRPP  GWG+ EAAR                    EGFVNFFG QRFGRDGTN+L+VG+ LL  DW  A+  I+APHPAD+  V+ AKEA F  +G + G+        RGA            +GG                                 R G G +R                                    GRE                                   E+V V+AE A+ G+F ++HVV+PLPG+SV FP N VG+ M  SL++DGVD ++L GHPQ+AFDL+GAYRHV+ H
Sbjct:  165 VATRVAFDAKEXXXXXXXXDGVGGPIDVLLPPPEPPRQVVLECPPSLDKAGRTEVHGTFRNHMAYFSTTAIMPAARPKMAGGGDEFGAPPPMVPNDGKVYLEVSFEKR--KSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLYIKRARLSYAGAKDRRALTAQKMRCWRLPAEAIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPSGGWGRGEAAR--------------------EGFVNFFGEQRFGRDGTNNLDVGLLLLEGDWPAAIDRIMAPHPADSAMVSEAKEAFF--DGRDYGYSM------RGA-----------PAGGG--------------------------------RRGRGGNRD-----------------------------------GREXX-----------------------XXXXXXXXXEEVVRVTAEAARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLVSLKQDGVDDVILNGHPQKAFDLEGAYRHVMNH 567          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA)

HSP 1 Score: 308 bits (790), Expect = 8.770e-87
Identity = 239/640 (37.34%), Postives = 302/640 (47.19%), Query Frame = 1
Query:   85 PPRELLLPCPPNLDKAGRTELHGVFRVYMPYLQTRAIM-------PGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEA-ARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEA----------------------CFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAI---------------LALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVI-VAGD---------RPQTAWDSRSESGEGFESSGE--------------RGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPRNLAVKPV---ALTIEDAGSYGEAGLKNG---ADRRSQRGE---------SMDPPTTASCLRVHFKDEISR 1752
            P   LLL CP ++DKAGRT LH +F+    YL+T+ ++       P               +T A+  +L Y   S      K R+ WP+GR EYLEFS+YKAGR THEA DA+ R+L V R R SYAG+KDRRA TAQK+RCWRL AE+L  A A+     EG+A+SD  +      LGQL+GN F V +  P    G T A A+ +A AD          ++  +GFVNFFG QRFGR  T + EVGM++LR +W+ AV  +LAP   D  +VAAAK A                                  AALA+LPR A +E  LL AL +S G D L A+                 LPR +R L+TQAYQSLLWN AAS RM    +  KAV GDL I V GD          P TAWD R   G G E +G                G +  G                        T   P +  +  V  E A+QG FG+EHVV          P++ VG R    L  DGV   VL+GHPQ  F L GAYRH++V P  +A       A   EDA +Y +    +    AD     G          S   P ++ C R H  + + R
Sbjct:  160 PAARLLLTCPADMDKAGRTGLHSLFKSLFGYLETKTVLGQPQESAPAEAAAEEDADASTPVATPAAALELQYKPPS------KGRRGWPRGRPEYLEFSLYKAGRGTHEAIDALSRVLRVKRTRFSYAGSKDRRAFTAQKVRCWRLEAEELVAADAA--MQKEGLAVSDLCYKPSELGLGQLRGNRFTVGVSLPE---GSTLADAQLSAAAD----------KLVAQGFVNFFGPQRFGRADTPNHEVGMSILRLEWAEAVDKLLAPSSRDGADVAAAKAAWADTXXXXXXXKLCVDSXXXXXXXXXXXXXXDVAAALALLPRRAMVEHALLGALAKSAGKDPLSALSXXXXXXXXXXXXXXXXLPRNLRQLYTQAYQSLLWNCAASTRME--MNTAKAVLGDLTIHVLGDLVLLDARTQAPLTAWDFR---GGGEEPAGALSDATAPAQEPARPAGVKGQGLGRWKKKTQGGGAGQGGRGGIPPSTFVAPPSIRVYMVEDEDAEQGRFGIEHVV--------EHPAHVVGTRTLHRLYADGVHETVLDGHPQSDFTLMGAYRHLIVKPEEIAAAATPSTAAAAEDADAYQDDAATSSIRDADTNCPGGGDSGAGSVTLSFSLPPSSFCGRTHAAEAVER 765          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A6H5JSV0_9PHAE (TRUD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV0_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.590e-83
Identity = 192/398 (48.24%), Postives = 244/398 (61.31%), Query Frame = 1
Query:  742 GFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTRE-----IVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPRNLAVKPV--ALTIEDAGSYGEAGLKNGADR---------RSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGS 1887
            GFVNFFG QRFGRDGTN+L+VG+ LL  DW GA+  I+APHPAD+  VA AKEA F  +G + G+  ++++LPR AF+ER +L AL +   +D L A+L LP  +R LF QAYQSLLWN AAS RMG  FD + AV+GDLV+V G+ P TAW++R +     ++        SGR     XXXXXXXXXXXXXXXX                +V VSAE A+ G+F ++HVV+PLPG+SV FP NAVG+ M  SL++DGVD ++L GHPQRAFDL+GAYRHV+VHPR+  VKP   A   E+     +   +  ADR         R  RG  M  P TA+ LR  F+ E+ RRF+GA+                          T IRVSF LP G+
Sbjct:   18 GFVNFFGEQRFGRDGTNNLDVGLRLLEGDWVGAIDRIMAPHPADSAMVAEAKEAFF--DGRDYGY--SMSLLPRTAFVERKILRALRDVQ-SDPLAALLELPPEVRLLFVQAYQSLLWNRAASRRMGGEFDTRMAVEGDLVLVKGEMPLTAWETRPDDVNKNKNKENASSLYSGRPTGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGGVVRVSAEVARAGVFTIKHVVLPLPGNSVMFPLNAVGEEMLMSLKQDGVDDVILNGHPQRAFDLEGAYRHVMVHPRDFDVKPEPPAAEEEEGPESPDIDAEVAADRARAEEIGAVRGPRG-GMPAPITAAWLRARFRAEVKRRFKGANGGXXXXXXXXXXXXXXXXXXXXXXNMTPIRVSFSLPLGA 409          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI001E1DBA27 (pseudouridylate synthase 7 homolog isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBA27)

HSP 1 Score: 191 bits (486), Expect = 3.950e-48
Identity = 139/493 (28.19%), Postives = 216/493 (43.81%), Query Frame = 1
Query:  124 DKAGRTELHGVFRVYMPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPRNLAVK 1602
            DK+ R +LHG      P + T  +                       +D  Y E           + WPKGRG+Y  F +YK  + T +A   I   + +      YAG KD+RA T+Q++  +R+ AE L +           +   +Y +  D  +LGQL+GN F V+LR      G  E        D G++       +RD GF+N++G QRFG     +  +G ALL C+W  AV++IL P   + + ++ A+E  +    E      +L   P+ A++ER++L  L + G ND +GA   + R  R ++  AYQS +WN   S R+     R   V GDLVI     P  ++    E+ +                                     +TD T  T  +V    + +  G F +  VV+P PG+ V +P+N +    +  +E+DG+D   +     + F L G YRH+VV P N+A K
Sbjct:  194 DKSVRAKLHGAIETGFPGINTSTVTK---------------------DDQKYIEARITNNQGNGLRKWPKGRGDYCRFVLYKEAKDTMDAIGLISGKMRLKTSLFQYAGTKDKRAKTSQEITVYRVAAEKLKDVNKQ----LRNIVTGNYSYTSDKLKLGQLKGNKFTVVLRSVT---GTEEQI------DSGMTS------LRDHGFINYYGMQRFGVFSVPTHHIGRALLSCNWKEAVELILKPRIGEDKVISEAREFWW----ETRDSKQSLTKFPKYAYIERSILQGLADRGANDYMGAFNKVARNTRLMYVHAYQSYIWNTVVSHRIKKHGLR--LVCGDLVI-----PHNSFTYMEETED----------------------------------CPAETDRTKVTPTVV----DDSNIGEFTIYDVVLPKPGYDVIYPTNDIEGLYKNLMEKDGLDYQNMRSK-HKDFSLSGDYRHIVVKPANVAWK 596          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: J3M8R0_ORYBR (TRUD domain-containing protein n=4 Tax=Oryza TaxID=4527 RepID=J3M8R0_ORYBR)

HSP 1 Score: 190 bits (482), Expect = 1.940e-47
Identity = 166/622 (26.69%), Postives = 273/622 (43.89%), Query Frame = 1
Query:  115 PNLDKAGRTELHGVFRVYMPYLQTRAIMP------------GSGG--GRGGGRGLVGSSTEASGNDLTYFEVSHDL-MDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAF---DLKGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGADRRSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNL----NPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
            P+ DKA R+E+H  F++   +L T  +              GSGG  GR GG G           ++   +   D   D++   +WP   G++L F + K  + T EA   I ++L +      +AG KD+RA+T Q++  +++ A  L  A  + +F   G+ + ++ +V +G  LGQL GN F + LR       ++E    AAV   G +           GF+N++G QRFG     +  VG ALLR +W  AV +IL P   +  ++   +E       E+G    AL   PR    E+ +L  L +  GN  L A+ ++PR +R ++  +YQS LWN AAS R+   +   + V+GDLV      P  A  +  ++ E ++                                  +T      + +  V  E   +G++  E VV+PLPG    FP N + D      ++DG+ S++   H  + F   ++KG YR V   P +   + +  T +D  S  E  L   +  +    + +    ++  L     D    +  G  D ++    + +V D  +    GS      K AI+++F LP  SYAT  ++ L
Sbjct:  116 PDADKAHRSEVHNFFKISFKFLVTDTVEHNDGVQRCIRVRLGSGGRDGRSGG-GXXXXXRGRKRKNMGGSDWRDDRPFDSRGSTSWPSHVGKFLRFHLCKENKDTQEALGVIGKMLGLQSRSFGFAGTKDKRAVTTQQVTVFKVSANRL-AALNNRLF---GIKVGNFSYVKEGLVLGQLMGNRFTITLRGVVA---ESEDVIKAAVEGLGKN-----------GFINYYGLQRFGSSSVPTQLVGAALLRGEWKSAVNLILDPREGERDDIREVRE----HYKEHGNIDMALRNFPRHLVAEKAILQCLKKCPGN-YLQALKSIPRTLRMMYVHSYQSYLWNHAASTRV-QKYGISQVVEGDLVYTKEIIPGEA--ASVDTSEPYDDQ----------------------LNSSNIDLCSETLPEETIQSVKIVDFEDLSKGVYSFEDVVLPLPGSQALFPGNKIADIYHEMAKKDGI-SLIENAHGVKEFSITNMKGGYRRVFQRPIDFEWELMTYT-DDTSSLAETDLDILSRNKPTETKEVSETESSGILSAQSHDS---KLAGPLDSSMPGSESGVVEDKSV----GSSDMLARKVAIKLAFTLPASSYATMAIREL 679          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI000A2A57A3 (pseudouridylate synthase 7 homolog n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A57A3)

HSP 1 Score: 186 bits (473), Expect = 1.680e-46
Identity = 147/512 (28.71%), Postives = 221/512 (43.16%), Query Frame = 1
Query:  124 DKAGRTELHGVFRVYMPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFAT-EGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGD-GFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPR---------NLAVKPVALTIED 1626
            DK  RT +H   +   P+L T  +                      G+        H     +    WP  RG + +F ++K  + T EA   + +L+       SYAG KDRR +T+Q++R +R+ A+ L      G+  T +G+ + ++ +V DG  LGQL GNHF + LR         E A                + +RD GF+N++G QRFG     +  +G ALL   WS AV  IL+P      E     +A  L   E G    AL IL R   +E  LL  LV+ G  D + A+  +PR  R ++  AYQS +WN A SWR+   G      V+GDLV+   + P             F S G   RE+S                       +D    P +  +  ++AE  + G F +  +V+PLPG+ V +P        +  +++DG+D   L  H  + + L GAYR +V+ P          N   +P+ LT +D
Sbjct:  159 DKEHRTLVHKSIKKIFPHLDTETVT-------------------VDGHKAVKVYRYHGNPSKRRTDKWPANRGNFCKFVLHKENKDTMEAICLLAKLVHAKSSAFSYAGTKDRRGVTSQEVRAYRVQAQRL-----KGLNKTLKGIQLGNFEYVQDGLTLGQLSGNHFIITLRDIQGERDDIEQA---------------MKSLRDVGFINYYGLQRFGTSAVPTHHIGKALLLSKWSEAVHAILSPKAGKEHEF---NDALKLWR-ETGDAAKALQILSRHKCIENTLLQGLVKHGSKDLVNALQWIPRNTRLMYIHAYQSFIWNSAVSWRIKKYGLT---PVEGDLVLTD-ELP-------------FSSDGSV-REES--------------EDASCQMRDKDALSAPRSVPVRMLTAEDVKSGGFTIHDIVMPLPGYDVTYPGYNSKQFYKELMDKDGIDIDNLR-HRVKDYSLSGAYRKLVIKPAHTCWCYHRYNDVNEPLVLTDKD 594          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI001CF9B84D (multisubstrate pseudouridine synthase 7 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9B84D)

HSP 1 Score: 186 bits (473), Expect = 4.350e-46
Identity = 170/628 (27.07%), Postives = 270/628 (42.99%), Query Frame = 1
Query:  118 NLDKAGRTELHGVFRVYMPYLQTRAIMP------------GSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIV-TVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDL---KGAYRHVVVHPRNL---------AVKPVALTIEDAGSYGEAGLKN--GADRRSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPG--LGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
            N DK  RT +H  F+    +L T  I               SGG  G GR           N     E   +  D++  + WP+ +G++L F +YK  + T EA   I ++L V      +AG KD+R+++ Q++  ++  A  L       I    G+ + D+ +V +G  LGQLQGN F V LR                VAD       +   +   GF+N+FG QRFG     +  +G  LL+ +W  AV MIL P   +  E++ A++  +  E ++      L  LPR    ER +L  L +  GN  L A+ A+PR +R ++  +YQS LWN AAS R+   +  ++ V GDLV   GD  +      +   E   S+ E   +  GR                       TD    T  +V TV+AE    G + +  +++P+PG  V +P N V +      ++DG+ S+    H  + F +    G+YR V   P +          + KP+A T  D     +A   N    +      E  DP   + C+     + +    + ++D N     G+  +  G  L    + + +TA+++ F LP   YAT  ++ L
Sbjct:  148 NSDKCHRTTIHNFFKENFKFLVTDTIEGPDNSSKCIRVRLNSGGNTGSGR-----------NSKKRKERGENPFDSRGSENWPEHQGKFLRFHLYKENKDTQEALGLITKMLGVQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNKRLI----GIQVGDFCYVKEGLLLGQLQGNRFTVTLR--------------GVVADSEDVIKASANSLGRLGFINYFGLQRFGSGSVPTQLIGATLLKGEWKAAVSMILDPREGERSEISKARQ--YYKETDD--IDGTLRKLPRHLVAERAILQCLKKCPGN-YLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKK-YGTEQVVVGDLVYSKGDNTEKEMTFVNSESEDENSNDE---DDCGR-----------------LDEVSATDLPVGTNNLVKTVTAEDVHSGKYTIGDIILPMPGSRVIYPINDVAEVYHNLAKKDGI-SLTERVHNVKEFSIISMTGSYRQVFQKPLDFEWELLKYTDSSKPLAET--DLDKIAKAKHLNIIKVEELVAGVEKKDP---SDCM--EHSESLENVVKLSTDDNEADCGGELSVPQGKSLNGSESEELQTALKLGFTLPTSCYATMAIREL 712          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A3B6A031_WHEAT (TRUD domain-containing protein n=25 Tax=Triticeae TaxID=147389 RepID=A0A3B6A031_WHEAT)

HSP 1 Score: 185 bits (470), Expect = 7.940e-46
Identity = 166/663 (25.04%), Postives = 277/663 (41.78%), Query Frame = 1
Query:   13 RASFDAAEANGEGVNDGVFLPPLPPPRELLLPCPPNLDKAGRTELHGVFRVYMPYLQTRAIMPGSGGGR----------GGGRG--------LVGSSTEASGNDLTYFEVSHDL-MDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDL---KGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGADRRSQRGESMDPPTTASCLRVHFKDEISRRFRGASD-------LNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
            R   +   A GEG    V L P             + DKA R+E+H  F+    +L T  +    G  +          GGGRG                   ++   +   D   D++   +WP   G++L F + K  + T +A   I ++L +      ++G KD+RA+T Q++  +++PA  +  A    ++   G+ + ++ +V +G  LGQL GN F + LR       ++E    AAV DG          +   GF+N++G QRFG     +  +G ALLR +W  AV ++L P   +  ++   +E       ++G    AL   PR    E+ +L  L +   N  L A+  +PRP+R ++  +YQS LWN AAS R+ + +   + V+GDL+      P  A    +   +G  +S E                             E+       + +  V +E   +GI+  E VV+PLPG    FP N V +      ++DG+ S+    H  + F +   KG YR V   P +   + +  T +D+ S  E  L   +  +    +  + P  +S        +       A+        L  N  +G  D +P         +K A++++F LP  SYAT  ++ L
Sbjct:   95 RGLLEKVAAGGEGDFSPVMLSP-------------DADKAHRSEVHNFFKKNFKFLVTDTVEHSDGVQKYIRVRVGSEAGGGRGRXXXXXXXXXXXXXXRKRKNMNGSDWGDDRPFDSRGSSSWPANAGKFLRFHLCKENKDTQDALGVIGKMLGLQSRSFGFSGTKDKRAVTTQQVTVFKVPANKI-AALNKRLY---GIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVA---ESEDMIKAAV-DG----------LGKNGFINYYGLQRFGSGSVPTHRIGAALLRGEWKNAVNLVLDPREGERDDIKEVRE----HYKQHGDIDMALRNFPRHLVAEKAILQCLRKCPDN-YLQALKGIPRPLRMMYVHSYQSYLWNHAASMRV-EKYGISQVVEGDLIYTKESHPGEATSVGTSEVDGLTNSSE--------------------IDICPEAIPEEN-----IQSVKLVDSEDLSKGIYSFEDVVLPLPGSQALFPGNEVAEIYHEMAKKDGI-SLTENAHGVKEFSITSMKGGYRRVFQKPIDFEWELMTYT-DDSASLAETDLDILSKGKLTEAKVANEPAASSKNSASNPPDCKMEEPLATSMPTSETRLEENKSIGSSDTLP---------SKLAVKLAFTLPASSYATMAIREL 684          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A1D1YKZ9_9ARAE (Multisubstrate pseudouridine synthase 7 (Fragment) n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YKZ9_9ARAE)

HSP 1 Score: 184 bits (467), Expect = 3.060e-45
Identity = 169/623 (27.13%), Postives = 262/623 (42.05%), Query Frame = 1
Query:  115 PNLDKAGRTELHGVFRVYMPYLQTRA--IMPGSG--------GGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTRE------IVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLK---GAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGADRRSQRGESMDPPT-TASCLRVHFKDEISRRFRGASD---LNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
            P+ DKA RTE+H  F+  M +L T    + PG+         GGR G     G   +A G+     ++     D++    WP+  G++L F +YK  + T EA   I ++L +      +AG KD+RA+T Q++  ++  A+ L       I    G+ + D+ +V +G  LG+L GN F ++LR                VAD   +   A   +  +GF+N++G QRFG     +  VG ALLR +W  AV +IL P   +   +  A+E       E+G     L  LPR    ER  L  L +  GN  L A+ A+PR +R ++  +YQS LWN AAS R+   +   + V GDLV   G  P                         G+                     E+   + CT        +  +  E   +G +  E V++PLPG  V +P N + D       +D + S+    H  + F +    G YR V   P +   + ++ T +D+    E  L   A  +    + M+ P+   SCL    K E S      SD     L+        V  + S      + A+++ F LP   YAT  ++ L
Sbjct:  160 PDDDKAHRTEVHNFFKKNMRFLITDVMEVSPGNSKCIRVRYSGGRRGDTRRSGRKRKARGDKFPEDDMP---FDSRGSNHWPEHCGKFLRFHLYKENKDTQEALGVIGKMLGIQPSSFGFAGTKDKRAITTQRVTVFKQHAKRLAALNNRLI----GIKVGDFCYVKEGLVLGKLSGNRFTIVLR--------------VVVADSDDTIKAAADALGTKGFINYYGLQRFGSGSVPTHVVGAALLRGEWKLAVGLILDPRDGERVAIREAREYYK----ESGDIEGTLKQLPRHLVAERAALNCLKKCPGN-YLQALKAIPRTLRMMYVHSYQSYLWNHAASVRV-QKYGVGRVVLGDLVYTKGSSP-------------------------GKLAKLNFAEAQDISYTDIYNVDEEFGLSDCTLPEESVPLVKVIKEEDLAEGGYTFEDVILPLPGSRVLYPKNEIADVYHDLASKDSI-SLTESIHNAKEFSITCMTGGYRRVFQQPYDFTWELLSYT-DDSMPLVETDLV--AIYKKIPTKMMENPSHDRSCLNSCLKRENSSEENPGSDGLCKKLDXXXXXXXHVDSVCSSDMQSPRMALKLGFTLPTSCYATVAIREL 726          
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI001F5C3C94 (multisubstrate pseudouridine synthase 7 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C3C94)

HSP 1 Score: 183 bits (464), Expect = 5.110e-45
Identity = 160/627 (25.52%), Postives = 278/627 (44.34%), Query Frame = 1
Query:  115 PNLDKAGRTELHGVFRVYMPYLQTRAIMPG--------------SGGGRGGGRGLVGSSTEASGNDLTYFEVSHDL-------MDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWD-SRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAF---DLKGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKN-GADRRSQRGESMDPPT-TASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
            P+ DKA R+E+HG F+    +L T  +                 +GGGR                         D+        D++    WP   G++L F++ K  + T +A   I ++L +      ++G KD+RA+T Q++  +++PA  L  A    ++   G+ + ++ +V +G  LGQL GN F + LR       ++E    AAV DG          +   GF+N++G QRFG     +  +G ALLR +W  AV ++L P   +  ++   +E       ++G    AL   PR    ER++L  L +S  N  L A+  +PR +R ++  +YQS LWN AAS R+ + +   + ++GDL+     RP+ A     SE+ +G  +S +                             E+       + +  V +E   +GI+  + VV+PLPG    FP N V +      ++DG+ S+    H  + F   ++KG YR V   P +   + +  T +D+ S  E  L     D+ +    + + PT T + +      ++    + ++  +   +V +  I    GS  T  +K A++++F LP  +YAT  ++ L
Sbjct:  117 PDADKAHRSEVHGFFKNNFKFLVTDTVEHSDGVQKCIRVRVGSEAGGGRXXXXXXXXXXXXXXXXXXXXXXXXKDMNGSDWGPYDSRGSSNWPAHIGKFLRFNLCKENKDTQDALGVIGKMLGLQSRAFGFSGTKDKRAVTTQQVTVFKVPANKL-AALNKRLY---GIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVA---ESEDMIKAAV-DG----------LGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKTAVNLVLDPREGERDDIKEVRE----HYKQHGDIDMALRNFPRHLVAERSILLCLRKSPDN-YLQALKGIPRTLRMMYVHSYQSYLWNHAASMRV-EKYGISQVIEGDLIYSKESRPEEATSVGTSEADDGHTNSSD--------------------LDISSEILPEEN-----IQSVKIVDSEDLLKGIYSFQDVVLPLPGSQALFPGNEVAEIYHEIAKKDGI-SLTESAHGVKEFSITNMKGGYRRVFQKPIDFEWELMTYT-DDSASLAETDLDLLSKDKLTDAKVAANEPTSTGNSVSKTADCKLEGPLQTSTPTSETRVVENKSI----GSSDTLPSKLAVKLTFTLPASTYATMAIREL 688          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYR3_ECTSI4.500e-11843.45Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A836CLL9_9STRA8.770e-8737.34TRUD domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5JSV0_9PHAE1.590e-8348.24TRUD domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI001E1DBA273.950e-4828.19pseudouridylate synthase 7 homolog isoform X1 n=3 ... [more]
J3M8R0_ORYBR1.940e-4726.69TRUD domain-containing protein n=4 Tax=Oryza TaxID... [more]
UPI000A2A57A31.680e-4628.71pseudouridylate synthase 7 homolog n=2 Tax=Exaipta... [more]
UPI001CF9B84D4.350e-4627.07multisubstrate pseudouridine synthase 7 n=2 Tax=An... [more]
A0A3B6A031_WHEAT7.940e-4625.04TRUD domain-containing protein n=25 Tax=Triticeae ... [more]
A0A1D1YKZ9_9ARAE3.060e-4527.13Multisubstrate pseudouridine synthase 7 (Fragment)... [more]
UPI001F5C3C945.110e-4525.52multisubstrate pseudouridine synthase 7 n=1 Tax=Lo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11700contigH-elongata_contig11700:1279..6923 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.4
Seed ortholog evalue1.5e-83
Seed eggNOG ortholog2880.D7FYR3
KEGG koko:K06176
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0585@1,KOG2339@2759
EC5.4.99.27
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Exons8
Model size2371
Cds size1815
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11700.1325.1prot_H-elongata_contig11700.1325.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11700 1667..6755 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929680.2071776-UTR-H-elongata_contig11700:1278..16661622929680.2071776-UTR-H-elongata_contig11700:1278..1666Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11700 1279..1666 -
1691679117.0110505-UTR-H-elongata_contig11700:1278..16661691679117.0110505-UTR-H-elongata_contig11700:1278..1666Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11700 1279..1666 -
1622929680.3350625-UTR-H-elongata_contig11700:6755..69231622929680.3350625-UTR-H-elongata_contig11700:6755..6923Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11700 6756..6923 -
1691679117.0949218-UTR-H-elongata_contig11700:6755..69231691679117.0949218-UTR-H-elongata_contig11700:6755..6923Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11700 6756..6923 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929680.2228487-CDS-H-elongata_contig11700:1666..20741622929680.2228487-CDS-H-elongata_contig11700:1666..2074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 1667..2074 -
1691679117.023087-CDS-H-elongata_contig11700:1666..20741691679117.023087-CDS-H-elongata_contig11700:1666..2074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 1667..2074 -
1622929680.2347074-CDS-H-elongata_contig11700:2342..24821622929680.2347074-CDS-H-elongata_contig11700:2342..2482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 2343..2482 -
1691679117.032981-CDS-H-elongata_contig11700:2342..24821691679117.032981-CDS-H-elongata_contig11700:2342..2482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 2343..2482 -
1622929680.24742-CDS-H-elongata_contig11700:2876..31751622929680.24742-CDS-H-elongata_contig11700:2876..3175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 2877..3175 -
1691679117.0427492-CDS-H-elongata_contig11700:2876..31751691679117.0427492-CDS-H-elongata_contig11700:2876..3175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 2877..3175 -
1622929680.2594333-CDS-H-elongata_contig11700:4138..43241622929680.2594333-CDS-H-elongata_contig11700:4138..4324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 4139..4324 -
1691679117.0510778-CDS-H-elongata_contig11700:4138..43241691679117.0510778-CDS-H-elongata_contig11700:4138..4324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 4139..4324 -
1622929680.2741427-CDS-H-elongata_contig11700:4631..48401622929680.2741427-CDS-H-elongata_contig11700:4631..4840Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 4632..4840 -
1691679117.0612977-CDS-H-elongata_contig11700:4631..48401691679117.0612977-CDS-H-elongata_contig11700:4631..4840Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 4632..4840 -
1622929680.289226-CDS-H-elongata_contig11700:5459..56961622929680.289226-CDS-H-elongata_contig11700:5459..5696Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 5460..5696 -
1691679117.0683448-CDS-H-elongata_contig11700:5459..56961691679117.0683448-CDS-H-elongata_contig11700:5459..5696Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 5460..5696 -
1622929680.3047311-CDS-H-elongata_contig11700:5908..59781622929680.3047311-CDS-H-elongata_contig11700:5908..5978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 5909..5978 -
1691679117.0768132-CDS-H-elongata_contig11700:5908..59781691679117.0768132-CDS-H-elongata_contig11700:5908..5978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 5909..5978 -
1622929680.3195643-CDS-H-elongata_contig11700:6489..67551622929680.3195643-CDS-H-elongata_contig11700:6489..6755Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 6490..6755 -
1691679117.0874546-CDS-H-elongata_contig11700:6489..67551691679117.0874546-CDS-H-elongata_contig11700:6489..6755Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11700 6490..6755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11700.1325.1

>prot_H-elongata_contig11700.1325.1 ID=prot_H-elongata_contig11700.1325.1|Name=mRNA_H-elongata_contig11700.1325.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=605bp
MPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSR
QAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRA
LTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGN
HFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQ
RFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGE
GENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLF
TQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESG
EGFESSGERGREQSGRRGKRGGRGGRGRGRGGRHGATEDTDETPCTREIV
TVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIV
LEGHPQRAFDLKGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGAD
RRSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPG
LGSGATAQAKTAIRVSFGLPRGSYATSLLQHLTGEGLGWTSGAKVDQDGE
FEVE*
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mRNA from alignment at H-elongata_contig11700:1279..6923-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11700.1325.1 ID=mRNA_H-elongata_contig11700.1325.1|Name=mRNA_H-elongata_contig11700.1325.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5645bp|location=Sequence derived from alignment at H-elongata_contig11700:1279..6923- (Himanthalia elongata Himel1 dioecious)
CTGGTCGCGGAGAGGGCAAGCTTCGATGCCGCCGAGGCTAACGGGGAAGG TGTCAACGACGGTGTTTTTCTGCCGCCGCTTCCGCCGCCGAGAGAGTTAC TCCTCCCTTGCCCCCCCAACCTCGACAAGGCCGGTCGCACCGAACTCCAC GGGGTGTTCCGGGTCTACATGCCGTACCTCCAAACGCGCGCGATTATGCC CGGTTCAGGAGGTGGTCGCGGCGGCGGCAGAGGACTTGTTGGGAGTTCTA CAGAGGCGAGCGGTAACGACCTCACGTACTTCGAGGTATCGCACGACTTG ATGGACACAAAAAGTAGGCAGGCTTGGCCAAAAGGAAGGGGAGAATATCT GGAGTTTTCGGTCTACAAGGCAGGACGATCAACGCACGAGGCGGCTGATG CCATCTGTAGACTCCTTGATGTTAATCGCGGAAGGTCGGTAAAGAGCGCA AGGTGGAAAGGGGGGTCCAGGCTTTCCAAATAGAAAGATGACGAGGGGGT ATTGAGGGTGAAAGTGAGCAGTCGTGTGCCAGCGCTGGCGCGCCACAGTG AACGACGTCTCTTCGGTTGATGATAAAAGTAAAAACTATGAATTGTGGCG GAATATCACCGTCGACACGTGGCACTCATTCTTCACCCTGGTGCGGCTCT TTCCTCTCGATGTTTTTCCGATTGTCGAGAGTCTTTGGTAGCCCCCCAGC CTGCACGATAATCGTTGCCCGTGCTCCCAACGTTGCCGCGCCCCAGCGAT CGATTACGGCGAAGGTCCTACCGGCTTCTTGGCAAAGGCTGCAATCACCC CGTCTGTTGCAGTACATGCTTTCGAGTTTCTAGATGCGGTTTTAACAGTT GCCGCTTTACCCCACGCTGCATGTGTCACCTTGGACCTCCGTCGTCACTT CTGTTGTCGCTCTCCTTCCTTTTCCCGGAAAACGACCTGCCCCAGGTTGT CGTACGCCGGCGCCAAGGATCGCAGGGCGCTCACGGCCCAGAAAATGCGT TGCTGGCGTCTCCCGGTGAGGAAGCCTCAAGAATCGCTTGAGAATTTTCG TCACACCCCCTCTCAAGAGGCGCGCTAGCCTGGGGTGTGCGGGTGTGAAG CTTTGGATATCACGACAGCGGTTCACCACGAACGCTGCCGTCAGCGCGCA TCCGCTCGCGTTCCAACCATGCGGCGTTTCCTCTTGTGCTGCGCGCATTT TCGTAACACTTTCGAATTAAATCAAAGGCCGAAGATCTCCACGAGGCTCA GGCTTCGGGGATATTTGCCACGGAAGGTGTCGCGATCTCGGACTACCGGT GGGTGGACGACGGCTTTAGGCTCGGGCAACTGCAAGGCAACCACTTCGAA GTGTTGTTGAGGCCGCCGCCTGAGGGGTGGGGACAGACCGAAGCGGCGAG AGCGGCGGCAGTGGCAGATGGGGGAGTCAGTCCCGCAGATGCCTTCCGGC GCGTGCGAGATGAGGTGTGCGAGATTGGTTTGCATTGCCTGGATCTGTCC ATTATCCTCCATTGGACATTAGTTTTGTGGCTGGTGTGGGCAAGGGGCCA GGGGGTTCGTTTCCCAACACTCTGTACCTGGGGGGACGGTTGAAGCCCAC CTGTGGTTTGCCCCGGCGCTGCCTCCGTGGTTCCTACTGGGCTGGCACGG CTTAAAGCTTTGCGGCGTGCTTCGCCAACAATTGAAGCTGCCAGGGTTCC ACGCTTGTATGTGCCTATTTATAATTATAATTCCGGATCCATGGCGTGTC GTAGAGAGTAAAGATGATAGCACGCCCTGAGGCCTCTCTATTGGGACGCC AATGTAGACACCAATACCGGGAGAATTCTGCGGAGAAGATGTAAGAAACG AGAAAGGCAGGGGAGGGAAAGAAACGTGCCTCAAGCGTTCGCAAAAGCTT GCCATACCGAGTCACAGCAGCATCGCGAAGACAGCAAAGCGGTTGCCGGG AAAAATGACCCCCTCGGAAGGAGGGGGAGGGGTTGGGGGGGAGGAGGTCC TTCCTTACACGGCACATACATGTGTGACATATTCCACATAACGTCCAATC TAGTGTTATCATCGTCGACGAATCTTTGTGCAGGGCTTTGTCAATTTTTT CGGGGCGCAGCGGTTCGGGCGAGACGGCACGAACTCCTTGGAAGTAGGAA TGGCACTGCTACGTTGTGACTGGTCCGGGGCGGTGAAGATGATCTTGGCT CCCCACCCAGCGGACACGCGAGAGGTGGCCGCTGCAAAAGAGGCGTGCTT CCTGGGAGAGGGGGAGAATGGCGGATTTCCTGCCGCGCTAGCGTGAGAGA TTTGTGGTGGCGTGCCTGCCGGCGGTTGTCTAGCTGTTCGTTGACTTGTA TGTGGTGTTTTGGTCTCTCACGCGCAGCGTTACGTGGCCTATCATTTAAG CAGCACTACTGTACGCTCAGTTTTACGTTTAAAAACAGTTTCGACAATCA CCGTCGGCAGTAGGATGCCTCACGCACACACAGGCGGGGTCGTGTTCCTT TCTGCCTCCAACGCCCCAACTGCTTTCTCTCTCTCTCTCTCTCTCTCTCT CTCTGTGCCGCGCGCGTGCACGCGTCTCCGCGGGAGTGGCCTGAAACAGG ATCCTCCCGCGCGGCGCGTTCTTGGAGCGAAATCTCCTGACGGCGCTCGT AGAATCGGGGGGCAATGATCAGCTCGGGGCGATCCTGGCGCTGCCTCGCC CAATGCGATCGCTTTTCACCCAAGCATACCAGAGCCTGCTTTGGAACGAG GCCGCGAGCTGGAGGATGGGCGACGGGTTCGACAGGTGTGCGCGGCGCCT AACTACTCAGCAATGAAAATCGCGTCGATGCCACAGACGTCTAATAGGTC TTCCTGACACACTTGTATCTTTGCGCTTTCCCCTCCTGGTTCCTCGCGGT CGATCCACTTCGATTCGATTCAATTCGATTCGATTCGATTCGATTGTGAA ATATTTGTGAAATGGAACCAAGTAGTCACGCGGCACAGCAGGGTCGCAGC AGAGGGGAGGCATAAGATTACCCCCGGAAAGGTTTTTGAAGCTTCGGGCA TGCACAGAGCGTCATAAATATAGGGCTTGGGAGTGTTAACAATAATCCGG TTATGCCTTCTCAAATTGTATCCCTCCTCATGGGAAGTGATAGTCGAAAC AGTATTGCCTCGCATGGAGGATATAATTTGAAGTGGTGACGGAATGTCTC GAAGTCCTAAGAGATTTATCAGTTTAAAAAAAAATGTTTTATCAGGGTAA TTATTTATTTCTCAAGAGTTCCTCGGAATTATCGTCAACGCGGGTACGAT ACGCTTAAGCAGTCATTCTTCGCGTGGCTGTAAATAGTCATTCTGCGCAT AGCTAATCCCCAAGTTCATTCACCAGCCAGGGGGTGCTCTTAGAAGATAG AGCAGTGACTCGATTGGCGAGGATAGAGAGGGAGCATGCCGTTTATAGAA CTGTGTACCATGTACTATATAAAGCTCGCTATTATAGTTCAACCACCTTC AGGGAAGGTGAGAGACGAGCTCCGCACACGGCGAGACACGCTGTGTCAGG GCACACCAAGGCTGTATCAATCCCACGACGCGAAGAGGGTTGGGGAAGGG AGACGTGGATTTTGGTTCTAAAAATGCTATTAACAGGCTGATCTGCACAA TACGCCGACTGCTTTTTCGTCGCGAGAGCGTCCTTCCCGTTCACGTTAGG GGATCCTTGCGAATCTCCCCTCCTCCCCTCCTCCCCTCCCCCAGCCAGAC AGAAAGCCGTACAAGGGGACCTGGTCATCGTCGCCGGAGATCGACCACAA ACGGCGTGGGATTCCCGGTCGGAGAGCGGCGAAGGCTTCGAGTCTTCGGG GGAGCGTGGGCGAGAGCAATCAGGCAGAAGGGGAAAGCGCGGGGGCAGAG GAGGCCGTGGCCGTGGTCGGGGGGGAAGACACGGCGCGACGGAAGACACT GATGAAACGCCGTGCACGCGAGAGATCGTCACGGTGTCAGCAGAGCAAGC ACAGCAAGGGATATTTGGGGTCGAGCATGTCGTCATCCCTCTGCCAGGTC GATGTAGTAATAGTAACGCGGTAGAGGGCCCGTTGGGAGGGGAGAAGGGT TTATCCTGTTCCTTAGACTCGGCCGCACCCGTGCAGTATGGGAAATATAT TTTCTTGCAATGTCTAGGGTTCCGAGAATATGGCGTTCCATCACGCTTTC AGTGATGAGTGAGTGATAATGCCCTTTCCGGAACGTTCAGACCCCTCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCACGACAACC CGCGCGGAAGGGGAGAGGCACACGAGAGAAACCCCCACCCCACCACACCC CNNNNNNNNNNAGTGATAATGCCCTTTCCGGAACGTTCAGCCCCCTCCCC CGCCCCCCCGCCCCCCAACTCCCTGAATATCTTCGCGATAGGTCACTCCG TGAGATTTCCATCCAACGCGGTCGGGGATCGTATGCGCGGTTCGCTAGAA AGGGACGGCGTCGACAGCATCGTTCTCGAAGGACACCCACAGCGCGCGTT TGACCTCAAGGGCGCATATCGACATGTCGTGGTAGGTGTTTTTATAGCAA TTCGGATCGCGGTAGGGCTCTGGCGCTTTGTTGCGCTGCAAGCTTTCGGT CGATCGTATTGGTGCTTTTGTCGTGAACGAGCTGTTTTGGTTGACCAGTG TAGTAGCTTCTCCGTGGGAGCGTTTGCCGTTACACGGGCAGTTACAGTTT GGCGCAACACGCCACGGTTTGGGACGAACCAGCATGTTACCCTCACGAGT TGATTGTTTCCTCCTAGATTGGAAACACACTACCTGCACCACTCCGCAGG TGCACCCCCGAAATCTTGCTGTGAAGCCTGTAGCCTTGACGATCGAGGAT GCTGGAAGCTATGGGGAGGCAGGACTAAAGAATGGTGCCGATCGCCGCTC GCAGAGGGGCGAGAGCATGGACCCCCCGACCACAGCCTCGTGCCTGAGGG TGCACTTCAAAGACGAGATATCCCGGAGATTCAGGGGGGCTAGTGACCTG AACCTGAACCCGATTGTTGGGGACGGTGATATTGTCCCGGGTCTAGGCAG CGGCGCAACTGCTCAGGCAAAAACCGCAATAAGGGTTTCGTTTGGCCTTC CTCGAGGGAGTTACGCGACATCGTTACTGCAGCATCTGACGGGTGAAGGT TTGGGTTGGACGAGCGGGGCGAAGGTAGATCAAGACGGGGAGTTCGAGGT TGAATGAGGCAGTGTAACCGTGGAGTCGGGAGAGAGGGAATTGCATGAAG CACCGGGTAGCCACACATTCCCGTGGAGTTTGTTTGCGTCGTGTTCGTTG CAAGTGGTTGACAACAAGGGGATGTAGTTTCCTCGCGATTCCACTACCAC TGTCAAAACTGACACTCGTTTTTTTCGGTATCGGGGAATGCAGCACCCAC GATATCGTAGCAAAAGCTAAAAGCTCTCGTGCAACATTGTTTCAAATGTG ACAATAGAGTCCGGGAAGGTCCGGGCGAGTATACAATCATCGAGACAGGA CAGCATACGAACAACAGGGCATATTTGCCCGCCCTGACTTTAGGCGAACT GATCCCGTTTGTGTAGCAAGCTTAAAGCACGTGTGCGTGTGTGTG
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Coding sequence (CDS) from alignment at H-elongata_contig11700:1279..6923-

>mRNA_H-elongata_contig11700.1325.1 ID=mRNA_H-elongata_contig11700.1325.1|Name=mRNA_H-elongata_contig11700.1325.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3630bp|location=Sequence derived from alignment at H-elongata_contig11700:1279..6923- (Himanthalia elongata Himel1 dioecious)
ATGCCGTACCTCCAAACGCGCGCGATTATGCCCGGTTCAGGAGGTGGTCG
CGGCGGCGGCAGAGGACTTGTTGGGAGTTCTACAGAGGCGAGCGGTAACG
ACCTCACGTACTTCGAGGTATCGCACGACTTGATGGACACAAAAAGTAGG
CAGGCTTGGCCAAAAGGAAGGGGAGAATATCTGGAGTTTTCGGTCTACAA
GGCAGGACGATCAACGCACGAGGCGGCTGATGCCATCTGTAGACTCCTTG
ATGTTAATCGCGGAAGATGCCGTACCTCCAAACGCGCGCGATTATGCCCG
GTTCAGGAGGTGGTCGCGGCGGCGGCAGAGGACTTGTTGGGAGTTCTACA
GAGGCGAGCGGTAACGACCTCACGTACTTCGAGGTATCGCACGACTTGAT
GGACACAAAAAGTAGGCAGGCTTGGCCAAAAGGAAGGGGAGAATATCTGG
AGTTTTCGGTCTACAAGGCAGGACGATCAACGCACGAGGCGGCTGATGCC
ATCTGTAGACTCCTTGATGTTAATCGCGGAAGGTTGTCGTACGCCGGCGC
CAAGGATCGCAGGGCGCTCACGGCCCAGAAAATGCGTTGCTGGCGTCTCC
CGGTTGTCGTACGCCGGCGCCAAGGATCGCAGGGCGCTCACGGCCCAGAA
AATGCGTTGCTGGCGTCTCCCGGCCGAAGATCTCCACGAGGCTCAGGCTT
CGGGGATATTTGCCACGGAAGGTGTCGCGATCTCGGACTACCGGTGGGTG
GACGACGGCTTTAGGCTCGGGCAACTGCAAGGCAACCACTTCGAAGTGTT
GTTGAGGCCGCCGCCTGAGGGGTGGGGACAGACCGAAGCGGCGAGAGCGG
CGGCAGTGGCAGATGGGGGAGTCAGTCCCGCAGATGCCTTCCGGCGCGTG
CGAGATGAGGCCGAAGATCTCCACGAGGCTCAGGCTTCGGGGATATTTGC
CACGGAAGGTGTCGCGATCTCGGACTACCGGTGGGTGGACGACGGCTTTA
GGCTCGGGCAACTGCAAGGCAACCACTTCGAAGTGTTGTTGAGGCCGCCG
CCTGAGGGGTGGGGACAGACCGAAGCGGCGAGAGCGGCGGCAGTGGCAGA
TGGGGGAGTCAGTCCCGCAGATGCCTTCCGGCGCGTGCGAGATGAGGGCT
TTGTCAATTTTTTCGGGGCGCAGCGGTTCGGGCGAGACGGCACGAACTCC
TTGGAAGTAGGAATGGCACTGCTACGTTGTGACTGGTCCGGGGCGGTGAA
GATGATCTTGGCTCCCCACCCAGCGGACACGCGAGAGGTGGCCGCTGCAA
AAGAGGCGTGCTTCCTGGGAGAGGGGGAGAATGGCGGATTTCCTGCCGCG
CTAGCGGCTTTGTCAATTTTTTCGGGGCGCAGCGGTTCGGGCGAGACGGC
ACGAACTCCTTGGAAGTAGGAATGGCACTGCTACGTTGTGACTGGTCCGG
GGCGGTGAAGATGATCTTGGCTCCCCACCCAGCGGACACGCGAGAGGTGG
CCGCTGCAAAAGAGGCGTGCTTCCTGGGAGAGGGGGAGAATGGCGGATTT
CCTGCCGCGCTAGCGATCCTCCCGCGCGGCGCGTTCTTGGAGCGAAATCT
CCTGACGGCGCTCGTAGAATCGGGGGGCAATGATCAGCTCGGGGCGATCC
TGGCGCTGCCTCGCCCAATGCGATCGCTTTTCACCCAAGCATACCAGAGC
CTGCTTTGGAACGAGGCCGCGAGCTGGAGGATGGGCGACGGGTTCGACAG
GATCCTCCCGCGCGGCGCGTTCTTGGAGCGAAATCTCCTGACGGCGCTCG
TAGAATCGGGGGGCAATGATCAGCTCGGGGCGATCCTGGCGCTGCCTCGC
CCAATGCGATCGCTTTTCACCCAAGCATACCAGAGCCTGCTTTGGAACGA
GGCCGCGAGCTGGAGGATGGGCGACGGGTTCGACAGACAGAAAGCCGTAC
AAGGGGACCTGGTCATCGTCGCCGGAGATCGACCACAAACGGCGTGGGAT
TCCCGGTCGGAGAGCGGCGAAGGCTTCGAGTCTTCGGGGGAGCGTGGGCG
AGAGCAATCAGGCAGAAGGGGAAAGCGCGGGGGCAGAGGAGGCCGTGGCC
GTGGTCGGGGGGGAAGACACGGCGCGACGGAAGACACTGATGAAACGCCG
TGCACGCGAGAGATCGTCACGGTGTCAGCAGAGCAAGCACAGCAAGGGAT
ATTTGGGGTCGAGCATGTCGTCATCCCTCTGCCAGACAGAAAGCCGTACA
AGGGGACCTGGTCATCGTCGCCGGAGATCGACCACAAACGGCGTGGGATT
CCCGGTCGGAGAGCGGCGAAGGCTTCGAGTCTTCGGGGGAGCGTGGGCGA
GAGCAATCAGGCAGAAGGGGAAAGCGCGGGGGCAGAGGAGGCCGTGGCCG
TGGTCGGGGGGGAAGACACGGCGCGACGGAAGACACTGATGAAACGCCGT
GCACGCGAGAGATCGTCACGGTGTCAGCAGAGCAAGCACAGCAAGGGATA
TTTGGGGTCGAGCATGTCGTCATCCCTCTGCCAGGTCACTCCGTGAGATT
TCCATCCAACGCGGTCGGGGATCGTATGCGCGGTTCGCTAGAAAGGGACG
GCGTCGACAGCATCGTTCTCGAAGGACACCCACAGCGCGCGTTTGACCTC
AAGGGCGCATATCGACATGTCGTGGTCACTCCGTGAGATTTCCATCCAAC
GCGGTCGGGGATCGTATGCGCGGTTCGCTAGAAAGGGACGGCGTCGACAG
CATCGTTCTCGAAGGACACCCACAGCGCGCGTTTGACCTCAAGGGCGCAT
ATCGACATGTCGTGGTGCACCCCCGAAATCTTGCTGTGAAGCCTGTAGCC
TTGACGATCGAGGATGCTGGAAGCTATGGGGAGGCAGGACTAAAGAATGG
TGCCGATCGCCGCTCGCAGAGGGGCGAGAGCATGGACCCCCCGACCACAG
CCTCGTGCCTGAGGGTGCACTTCAAAGACGAGATATCCCGGAGATTCAGG
GGGGCTAGTGACCTGAACCTGAACCCGATTGTTGGGGACGGTGATATTGT
CCCGGGTCTAGGCAGCGGCGCAACTGCTCAGGCAAAAACCGCAATAAGGG
TTTCGTTTGGCCTTCCTCGAGGGAGTTACGCGACATCGTTACTGCAGCAT
CTGACGGGTGAAGGTTTGGGTTGGACGAGCGGGGCGAAGGTAGATCAAGA
CGGGGAGTTCGAGGTTGAATGAGTGCACCCCCGAAATCTTGCTGTGAAGC
CTGTAGCCTTGACGATCGAGGATGCTGGAAGCTATGGGGAGGCAGGACTA
AAGAATGGTGCCGATCGCCGCTCGCAGAGGGGCGAGAGCATGGACCCCCC
GACCACAGCCTCGTGCCTGAGGGTGCACTTCAAAGACGAGATATCCCGGA
GATTCAGGGGGGCTAGTGACCTGAACCTGAACCCGATTGTTGGGGACGGT
GATATTGTCCCGGGTCTAGGCAGCGGCGCAACTGCTCAGGCAAAAACCGC
AATAAGGGTTTCGTTTGGCCTTCCTCGAGGGAGTTACGCGACATCGTTAC
TGCAGCATCTGACGGGTGAAGGTTTGGGTTGGACGAGCGGGGCGAAGGTA
GATCAAGACGGGGAGTTCGAGGTTGAATGA
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