mRNA_H-elongata_contig11700.1325.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI) HSP 1 Score: 377 bits (969), Expect = 4.500e-118 Identity = 232/534 (43.45%), Postives = 287/534 (53.75%), Query Frame = 1
Query: 4 VAERASFDAAEA-------NGEGVNDGVFLPPLPPPRELLLPCPPNLDKAGRTELHGVFRVYMPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGND-LTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVH 1581
VA R +FDA E +G G V LPP PPR+++L CPP+LDKAGRTE+HG FR +M Y T AIMP + GG G+ ND Y EVS + KSR +WPKGRGEYLEFSVYKAGRST E A+A+C+ L + R RLSYAGAKDRRALTAQKMRCWRLPAE +HEA A G+ + +G+A+SDYR+V+ LG L+GNHF+VLLRPP GWG+ EAAR EGFVNFFG QRFGRDGTN+L+VG+ LL DW A+ I+APHPAD+ V+ AKEA F +G + G+ RGA +GG R G G +R GRE E+V V+AE A+ G+F ++HVV+PLPG+SV FP N VG+ M SL++DGVD ++L GHPQ+AFDL+GAYRHV+ H
Sbjct: 165 VATRVAFDAKEXXXXXXXXDGVGGPIDVLLPPPEPPRQVVLECPPSLDKAGRTEVHGTFRNHMAYFSTTAIMPAARPKMAGGGDEFGAPPPMVPNDGKVYLEVSFEKR--KSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLYIKRARLSYAGAKDRRALTAQKMRCWRLPAEAIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPSGGWGRGEAAR--------------------EGFVNFFGEQRFGRDGTNNLDVGLLLLEGDWPAAIDRIMAPHPADSAMVSEAKEAFF--DGRDYGYSM------RGA-----------PAGGG--------------------------------RRGRGGNRD-----------------------------------GREXX-----------------------XXXXXXXXXEEVVRVTAEAARAGVFTIKHVVLPLPGNSVMFPLNPVGEEMLVSLKQDGVDDVILNGHPQKAFDLEGAYRHVMNH 567
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA) HSP 1 Score: 308 bits (790), Expect = 8.770e-87 Identity = 239/640 (37.34%), Postives = 302/640 (47.19%), Query Frame = 1
Query: 85 PPRELLLPCPPNLDKAGRTELHGVFRVYMPYLQTRAIM-------PGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEA-ARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEA----------------------CFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAI---------------LALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVI-VAGD---------RPQTAWDSRSESGEGFESSGE--------------RGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPRNLAVKPV---ALTIEDAGSYGEAGLKNG---ADRRSQRGE---------SMDPPTTASCLRVHFKDEISR 1752
P LLL CP ++DKAGRT LH +F+ YL+T+ ++ P +T A+ +L Y S K R+ WP+GR EYLEFS+YKAGR THEA DA+ R+L V R R SYAG+KDRRA TAQK+RCWRL AE+L A A+ EG+A+SD + LGQL+GN F V + P G T A A+ +A AD ++ +GFVNFFG QRFGR T + EVGM++LR +W+ AV +LAP D +VAAAK A AALA+LPR A +E LL AL +S G D L A+ LPR +R L+TQAYQSLLWN AAS RM + KAV GDL I V GD P TAWD R G G E +G G + G T P + + V E A+QG FG+EHVV P++ VG R L DGV VL+GHPQ F L GAYRH++V P +A A EDA +Y + + AD G S P ++ C R H + + R
Sbjct: 160 PAARLLLTCPADMDKAGRTGLHSLFKSLFGYLETKTVLGQPQESAPAEAAAEEDADASTPVATPAAALELQYKPPS------KGRRGWPRGRPEYLEFSLYKAGRGTHEAIDALSRVLRVKRTRFSYAGSKDRRAFTAQKVRCWRLEAEELVAADAA--MQKEGLAVSDLCYKPSELGLGQLRGNRFTVGVSLPE---GSTLADAQLSAAAD----------KLVAQGFVNFFGPQRFGRADTPNHEVGMSILRLEWAEAVDKLLAPSSRDGADVAAAKAAWADTXXXXXXXKLCVDSXXXXXXXXXXXXXXDVAAALALLPRRAMVEHALLGALAKSAGKDPLSALSXXXXXXXXXXXXXXXXLPRNLRQLYTQAYQSLLWNCAASTRME--MNTAKAVLGDLTIHVLGDLVLLDARTQAPLTAWDFR---GGGEEPAGALSDATAPAQEPARPAGVKGQGLGRWKKKTQGGGAGQGGRGGIPPSTFVAPPSIRVYMVEDEDAEQGRFGIEHVV--------EHPAHVVGTRTLHRLYADGVHETVLDGHPQSDFTLMGAYRHLIVKPEEIAAAATPSTAAAAEDADAYQDDAATSSIRDADTNCPGGGDSGAGSVTLSFSLPPSSFCGRTHAAEAVER 765
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A6H5JSV0_9PHAE (TRUD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV0_9PHAE) HSP 1 Score: 282 bits (722), Expect = 1.590e-83 Identity = 192/398 (48.24%), Postives = 244/398 (61.31%), Query Frame = 1
Query: 742 GFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTRE-----IVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPRNLAVKPV--ALTIEDAGSYGEAGLKNGADR---------RSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGS 1887
GFVNFFG QRFGRDGTN+L+VG+ LL DW GA+ I+APHPAD+ VA AKEA F +G + G+ ++++LPR AF+ER +L AL + +D L A+L LP +R LF QAYQSLLWN AAS RMG FD + AV+GDLV+V G+ P TAW++R + ++ SGR XXXXXXXXXXXXXXXX +V VSAE A+ G+F ++HVV+PLPG+SV FP NAVG+ M SL++DGVD ++L GHPQRAFDL+GAYRHV+VHPR+ VKP A E+ + + ADR R RG M P TA+ LR F+ E+ RRF+GA+ T IRVSF LP G+
Sbjct: 18 GFVNFFGEQRFGRDGTNNLDVGLRLLEGDWVGAIDRIMAPHPADSAMVAEAKEAFF--DGRDYGY--SMSLLPRTAFVERKILRALRDVQ-SDPLAALLELPPEVRLLFVQAYQSLLWNRAASRRMGGEFDTRMAVEGDLVLVKGEMPLTAWETRPDDVNKNKNKENASSLYSGRPTGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGGVVRVSAEVARAGVFTIKHVVLPLPGNSVMFPLNAVGEEMLMSLKQDGVDDVILNGHPQRAFDLEGAYRHVMVHPRDFDVKPEPPAAEEEEGPESPDIDAEVAADRARAEEIGAVRGPRG-GMPAPITAAWLRARFRAEVKRRFKGANGGXXXXXXXXXXXXXXXXXXXXXXNMTPIRVSFSLPLGA 409
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI001E1DBA27 (pseudouridylate synthase 7 homolog isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBA27) HSP 1 Score: 191 bits (486), Expect = 3.950e-48 Identity = 139/493 (28.19%), Postives = 216/493 (43.81%), Query Frame = 1
Query: 124 DKAGRTELHGVFRVYMPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPRNLAVK 1602
DK+ R +LHG P + T + +D Y E + WPKGRG+Y F +YK + T +A I + + YAG KD+RA T+Q++ +R+ AE L + + +Y + D +LGQL+GN F V+LR G E D G++ +RD GF+N++G QRFG + +G ALL C+W AV++IL P + + ++ A+E + E +L P+ A++ER++L L + G ND +GA + R R ++ AYQS +WN S R+ R V GDLVI P ++ E+ + +TD T T +V + + G F + VV+P PG+ V +P+N + + +E+DG+D + + F L G YRH+VV P N+A K
Sbjct: 194 DKSVRAKLHGAIETGFPGINTSTVTK---------------------DDQKYIEARITNNQGNGLRKWPKGRGDYCRFVLYKEAKDTMDAIGLISGKMRLKTSLFQYAGTKDKRAKTSQEITVYRVAAEKLKDVNKQ----LRNIVTGNYSYTSDKLKLGQLKGNKFTVVLRSVT---GTEEQI------DSGMTS------LRDHGFINYYGMQRFGVFSVPTHHIGRALLSCNWKEAVELILKPRIGEDKVISEAREFWW----ETRDSKQSLTKFPKYAYIERSILQGLADRGANDYMGAFNKVARNTRLMYVHAYQSYIWNTVVSHRIKKHGLR--LVCGDLVI-----PHNSFTYMEETED----------------------------------CPAETDRTKVTPTVV----DDSNIGEFTIYDVVLPKPGYDVIYPTNDIEGLYKNLMEKDGLDYQNMRSK-HKDFSLSGDYRHIVVKPANVAWK 596
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: J3M8R0_ORYBR (TRUD domain-containing protein n=4 Tax=Oryza TaxID=4527 RepID=J3M8R0_ORYBR) HSP 1 Score: 190 bits (482), Expect = 1.940e-47 Identity = 166/622 (26.69%), Postives = 273/622 (43.89%), Query Frame = 1
Query: 115 PNLDKAGRTELHGVFRVYMPYLQTRAIMP------------GSGG--GRGGGRGLVGSSTEASGNDLTYFEVSHDL-MDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAF---DLKGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGADRRSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNL----NPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
P+ DKA R+E+H F++ +L T + GSGG GR GG G ++ + D D++ +WP G++L F + K + T EA I ++L + +AG KD+RA+T Q++ +++ A L A + +F G+ + ++ +V +G LGQL GN F + LR ++E AAV G + GF+N++G QRFG + VG ALLR +W AV +IL P + ++ +E E+G AL PR E+ +L L + GN L A+ ++PR +R ++ +YQS LWN AAS R+ + + V+GDLV P A + ++ E ++ +T + + V E +G++ E VV+PLPG FP N + D ++DG+ S++ H + F ++KG YR V P + + + T +D S E L + + + + ++ L D + G D ++ + +V D + GS K AI+++F LP SYAT ++ L
Sbjct: 116 PDADKAHRSEVHNFFKISFKFLVTDTVEHNDGVQRCIRVRLGSGGRDGRSGG-GXXXXXRGRKRKNMGGSDWRDDRPFDSRGSTSWPSHVGKFLRFHLCKENKDTQEALGVIGKMLGLQSRSFGFAGTKDKRAVTTQQVTVFKVSANRL-AALNNRLF---GIKVGNFSYVKEGLVLGQLMGNRFTITLRGVVA---ESEDVIKAAVEGLGKN-----------GFINYYGLQRFGSSSVPTQLVGAALLRGEWKSAVNLILDPREGERDDIREVRE----HYKEHGNIDMALRNFPRHLVAEKAILQCLKKCPGN-YLQALKSIPRTLRMMYVHSYQSYLWNHAASTRV-QKYGISQVVEGDLVYTKEIIPGEA--ASVDTSEPYDDQ----------------------LNSSNIDLCSETLPEETIQSVKIVDFEDLSKGVYSFEDVVLPLPGSQALFPGNKIADIYHEMAKKDGI-SLIENAHGVKEFSITNMKGGYRRVFQRPIDFEWELMTYT-DDTSSLAETDLDILSRNKPTETKEVSETESSGILSAQSHDS---KLAGPLDSSMPGSESGVVEDKSV----GSSDMLARKVAIKLAFTLPASSYATMAIREL 679
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI000A2A57A3 (pseudouridylate synthase 7 homolog n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A57A3) HSP 1 Score: 186 bits (473), Expect = 1.680e-46 Identity = 147/512 (28.71%), Postives = 221/512 (43.16%), Query Frame = 1
Query: 124 DKAGRTELHGVFRVYMPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFAT-EGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGD-GFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLKGAYRHVVVHPR---------NLAVKPVALTIED 1626
DK RT +H + P+L T + G+ H + WP RG + +F ++K + T EA + +L+ SYAG KDRR +T+Q++R +R+ A+ L G+ T +G+ + ++ +V DG LGQL GNHF + LR E A + +RD GF+N++G QRFG + +G ALL WS AV IL+P E +A L E G AL IL R +E LL LV+ G D + A+ +PR R ++ AYQS +WN A SWR+ G V+GDLV+ + P F S G RE+S +D P + + ++AE + G F + +V+PLPG+ V +P + +++DG+D L H + + L GAYR +V+ P N +P+ LT +D
Sbjct: 159 DKEHRTLVHKSIKKIFPHLDTETVT-------------------VDGHKAVKVYRYHGNPSKRRTDKWPANRGNFCKFVLHKENKDTMEAICLLAKLVHAKSSAFSYAGTKDRRGVTSQEVRAYRVQAQRL-----KGLNKTLKGIQLGNFEYVQDGLTLGQLSGNHFIITLRDIQGERDDIEQA---------------MKSLRDVGFINYYGLQRFGTSAVPTHHIGKALLLSKWSEAVHAILSPKAGKEHEF---NDALKLWR-ETGDAAKALQILSRHKCIENTLLQGLVKHGSKDLVNALQWIPRNTRLMYIHAYQSFIWNSAVSWRIKKYGLT---PVEGDLVLTD-ELP-------------FSSDGSV-REES--------------EDASCQMRDKDALSAPRSVPVRMLTAEDVKSGGFTIHDIVMPLPGYDVTYPGYNSKQFYKELMDKDGIDIDNLR-HRVKDYSLSGAYRKLVIKPAHTCWCYHRYNDVNEPLVLTDKD 594
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI001CF9B84D (multisubstrate pseudouridine synthase 7 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9B84D) HSP 1 Score: 186 bits (473), Expect = 4.350e-46 Identity = 170/628 (27.07%), Postives = 270/628 (42.99%), Query Frame = 1
Query: 118 NLDKAGRTELHGVFRVYMPYLQTRAIMP------------GSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIV-TVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDL---KGAYRHVVVHPRNL---------AVKPVALTIEDAGSYGEAGLKN--GADRRSQRGESMDPPTTASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPG--LGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
N DK RT +H F+ +L T I SGG G GR N E + D++ + WP+ +G++L F +YK + T EA I ++L V +AG KD+R+++ Q++ ++ A L I G+ + D+ +V +G LGQLQGN F V LR VAD + + GF+N+FG QRFG + +G LL+ +W AV MIL P + E++ A++ + E ++ L LPR ER +L L + GN L A+ A+PR +R ++ +YQS LWN AAS R+ + ++ V GDLV GD + + E S+ E + GR TD T +V TV+AE G + + +++P+PG V +P N V + ++DG+ S+ H + F + G+YR V P + + KP+A T D +A N + E DP + C+ + + + ++D N G+ + G L + + +TA+++ F LP YAT ++ L
Sbjct: 148 NSDKCHRTTIHNFFKENFKFLVTDTIEGPDNSSKCIRVRLNSGGNTGSGR-----------NSKKRKERGENPFDSRGSENWPEHQGKFLRFHLYKENKDTQEALGLITKMLGVQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNKRLI----GIQVGDFCYVKEGLLLGQLQGNRFTVTLR--------------GVVADSEDVIKASANSLGRLGFINYFGLQRFGSGSVPTQLIGATLLKGEWKAAVSMILDPREGERSEISKARQ--YYKETDD--IDGTLRKLPRHLVAERAILQCLKKCPGN-YLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKK-YGTEQVVVGDLVYSKGDNTEKEMTFVNSESEDENSNDE---DDCGR-----------------LDEVSATDLPVGTNNLVKTVTAEDVHSGKYTIGDIILPMPGSRVIYPINDVAEVYHNLAKKDGI-SLTERVHNVKEFSIISMTGSYRQVFQKPLDFEWELLKYTDSSKPLAET--DLDKIAKAKHLNIIKVEELVAGVEKKDP---SDCM--EHSESLENVVKLSTDDNEADCGGELSVPQGKSLNGSESEELQTALKLGFTLPTSCYATMAIREL 712
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A3B6A031_WHEAT (TRUD domain-containing protein n=25 Tax=Triticeae TaxID=147389 RepID=A0A3B6A031_WHEAT) HSP 1 Score: 185 bits (470), Expect = 7.940e-46 Identity = 166/663 (25.04%), Postives = 277/663 (41.78%), Query Frame = 1
Query: 13 RASFDAAEANGEGVNDGVFLPPLPPPRELLLPCPPNLDKAGRTELHGVFRVYMPYLQTRAIMPGSGGGR----------GGGRG--------LVGSSTEASGNDLTYFEVSHDL-MDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDL---KGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGADRRSQRGESMDPPTTASCLRVHFKDEISRRFRGASD-------LNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
R + A GEG V L P + DKA R+E+H F+ +L T + G + GGGRG ++ + D D++ +WP G++L F + K + T +A I ++L + ++G KD+RA+T Q++ +++PA + A ++ G+ + ++ +V +G LGQL GN F + LR ++E AAV DG + GF+N++G QRFG + +G ALLR +W AV ++L P + ++ +E ++G AL PR E+ +L L + N L A+ +PRP+R ++ +YQS LWN AAS R+ + + + V+GDL+ P A + +G +S E E+ + + V +E +GI+ E VV+PLPG FP N V + ++DG+ S+ H + F + KG YR V P + + + T +D+ S E L + + + + P +S + A+ L N +G D +P +K A++++F LP SYAT ++ L
Sbjct: 95 RGLLEKVAAGGEGDFSPVMLSP-------------DADKAHRSEVHNFFKKNFKFLVTDTVEHSDGVQKYIRVRVGSEAGGGRGRXXXXXXXXXXXXXXRKRKNMNGSDWGDDRPFDSRGSSSWPANAGKFLRFHLCKENKDTQDALGVIGKMLGLQSRSFGFSGTKDKRAVTTQQVTVFKVPANKI-AALNKRLY---GIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVA---ESEDMIKAAV-DG----------LGKNGFINYYGLQRFGSGSVPTHRIGAALLRGEWKNAVNLVLDPREGERDDIKEVRE----HYKQHGDIDMALRNFPRHLVAEKAILQCLRKCPDN-YLQALKGIPRPLRMMYVHSYQSYLWNHAASMRV-EKYGISQVVEGDLIYTKESHPGEATSVGTSEVDGLTNSSE--------------------IDICPEAIPEEN-----IQSVKLVDSEDLSKGIYSFEDVVLPLPGSQALFPGNEVAEIYHEMAKKDGI-SLTENAHGVKEFSITSMKGGYRRVFQKPIDFEWELMTYT-DDSASLAETDLDILSKGKLTEAKVANEPAASSKNSASNPPDCKMEEPLATSMPTSETRLEENKSIGSSDTLP---------SKLAVKLAFTLPASSYATMAIREL 684
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: A0A1D1YKZ9_9ARAE (Multisubstrate pseudouridine synthase 7 (Fragment) n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YKZ9_9ARAE) HSP 1 Score: 184 bits (467), Expect = 3.060e-45 Identity = 169/623 (27.13%), Postives = 262/623 (42.05%), Query Frame = 1
Query: 115 PNLDKAGRTELHGVFRVYMPYLQTRA--IMPGSG--------GGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWDSRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTRE------IVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAFDLK---GAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKNGADRRSQRGESMDPPT-TASCLRVHFKDEISRRFRGASD---LNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
P+ DKA RTE+H F+ M +L T + PG+ GGR G G +A G+ ++ D++ WP+ G++L F +YK + T EA I ++L + +AG KD+RA+T Q++ ++ A+ L I G+ + D+ +V +G LG+L GN F ++LR VAD + A + +GF+N++G QRFG + VG ALLR +W AV +IL P + + A+E E+G L LPR ER L L + GN L A+ A+PR +R ++ +YQS LWN AAS R+ + + V GDLV G P G+ E+ + CT + + E +G + E V++PLPG V +P N + D +D + S+ H + F + G YR V P + + ++ T +D+ E L A + + M+ P+ SCL K E S SD L+ V + S + A+++ F LP YAT ++ L
Sbjct: 160 PDDDKAHRTEVHNFFKKNMRFLITDVMEVSPGNSKCIRVRYSGGRRGDTRRSGRKRKARGDKFPEDDMP---FDSRGSNHWPEHCGKFLRFHLYKENKDTQEALGVIGKMLGIQPSSFGFAGTKDKRAITTQRVTVFKQHAKRLAALNNRLI----GIKVGDFCYVKEGLVLGKLSGNRFTIVLR--------------VVVADSDDTIKAAADALGTKGFINYYGLQRFGSGSVPTHVVGAALLRGEWKLAVGLILDPRDGERVAIREAREYYK----ESGDIEGTLKQLPRHLVAERAALNCLKKCPGN-YLQALKAIPRTLRMMYVHSYQSYLWNHAASVRV-QKYGVGRVVLGDLVYTKGSSP-------------------------GKLAKLNFAEAQDISYTDIYNVDEEFGLSDCTLPEESVPLVKVIKEEDLAEGGYTFEDVILPLPGSRVLYPKNEIADVYHDLASKDSI-SLTESIHNAKEFSITCMTGGYRRVFQQPYDFTWELLSYT-DDSMPLVETDLV--AIYKKIPTKMMENPSHDRSCLNSCLKRENSSEENPGSDGLCKKLDXXXXXXXHVDSVCSSDMQSPRMALKLGFTLPTSCYATVAIREL 726
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Match: UPI001F5C3C94 (multisubstrate pseudouridine synthase 7 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C3C94) HSP 1 Score: 183 bits (464), Expect = 5.110e-45 Identity = 160/627 (25.52%), Postives = 278/627 (44.34%), Query Frame = 1
Query: 115 PNLDKAGRTELHGVFRVYMPYLQTRAIMPG--------------SGGGRGGGRGLVGSSTEASGNDLTYFEVSHDL-------MDTKSRQAWPKGRGEYLEFSVYKAGRSTHEAADAICRLLDVNRGRLSYAGAKDRRALTAQKMRCWRLPAEDLHEAQASGIFATEGVAISDYRWVDDGFRLGQLQGNHFEVLLRPPPEGWGQTEAARAAAVADGGVSPADAFRRVRDEGFVNFFGAQRFGRDGTNSLEVGMALLRCDWSGAVKMILAPHPADTREVAAAKEACFLGEGENGGFPAALAILPRGAFLERNLLTALVESGGNDQLGAILALPRPMRSLFTQAYQSLLWNEAASWRMGDGFDRQKAVQGDLVIVAGDRPQTAWD-SRSESGEGFESSGERGREQSGRRXXXXXXXXXXXXXXXXXXXXEDTDETPCTREIVTVSAEQAQQGIFGVEHVVIPLPGHSVRFPSNAVGDRMRGSLERDGVDSIVLEGHPQRAF---DLKGAYRHVVVHPRNLAVKPVALTIEDAGSYGEAGLKN-GADRRSQRGESMDPPT-TASCLRVHFKDEISRRFRGASDLNLNPIVGDGDIVPGLGSGATAQAKTAIRVSFGLPRGSYATSLLQHL 1914
P+ DKA R+E+HG F+ +L T + +GGGR D+ D++ WP G++L F++ K + T +A I ++L + ++G KD+RA+T Q++ +++PA L A ++ G+ + ++ +V +G LGQL GN F + LR ++E AAV DG + GF+N++G QRFG + +G ALLR +W AV ++L P + ++ +E ++G AL PR ER++L L +S N L A+ +PR +R ++ +YQS LWN AAS R+ + + + ++GDL+ RP+ A SE+ +G +S + E+ + + V +E +GI+ + VV+PLPG FP N V + ++DG+ S+ H + F ++KG YR V P + + + T +D+ S E L D+ + + + PT T + + ++ + ++ + +V + I GS T +K A++++F LP +YAT ++ L
Sbjct: 117 PDADKAHRSEVHGFFKNNFKFLVTDTVEHSDGVQKCIRVRVGSEAGGGRXXXXXXXXXXXXXXXXXXXXXXXXKDMNGSDWGPYDSRGSSNWPAHIGKFLRFNLCKENKDTQDALGVIGKMLGLQSRAFGFSGTKDKRAVTTQQVTVFKVPANKL-AALNKRLY---GIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVA---ESEDMIKAAV-DG----------LGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKTAVNLVLDPREGERDDIKEVRE----HYKQHGDIDMALRNFPRHLVAERSILLCLRKSPDN-YLQALKGIPRTLRMMYVHSYQSYLWNHAASMRV-EKYGISQVIEGDLIYSKESRPEEATSVGTSEADDGHTNSSD--------------------LDISSEILPEEN-----IQSVKIVDSEDLLKGIYSFQDVVLPLPGSQALFPGNEVAEIYHEIAKKDGI-SLTESAHGVKEFSITNMKGGYRRVFQKPIDFEWELMTYT-DDSASLAETDLDLLSKDKLTDAKVAANEPTSTGNSVSKTADCKLEGPLQTSTPTSETRVVENKSI----GSSDTLPSKLAVKLTFTLPASTYATMAIREL 688 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11700.1325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11700.1325.1 >prot_H-elongata_contig11700.1325.1 ID=prot_H-elongata_contig11700.1325.1|Name=mRNA_H-elongata_contig11700.1325.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=605bp MPYLQTRAIMPGSGGGRGGGRGLVGSSTEASGNDLTYFEVSHDLMDTKSRback to top mRNA from alignment at H-elongata_contig11700:1279..6923- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11700.1325.1 ID=mRNA_H-elongata_contig11700.1325.1|Name=mRNA_H-elongata_contig11700.1325.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5645bp|location=Sequence derived from alignment at H-elongata_contig11700:1279..6923- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11700:1279..6923- >mRNA_H-elongata_contig11700.1325.1 ID=mRNA_H-elongata_contig11700.1325.1|Name=mRNA_H-elongata_contig11700.1325.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3630bp|location=Sequence derived from alignment at H-elongata_contig11700:1279..6923- (Himanthalia elongata Himel1 dioecious)back to top |