mRNA_H-elongata_contig578.13249.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: D8LR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR81_ECTSI) HSP 1 Score: 385 bits (989), Expect = 2.800e-131 Identity = 176/217 (81.11%), Postives = 197/217 (90.78%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISIL 663
+VNYTRK+QHFAAYLVPLLF PS C+C GTLELSWGVW+TL+GF VMIKPIREA+P+FMLQFNGLDRPEDRPHTLEWIIKYNIWPGE++IV F HLF +S Q++LVYILVFVTG+GDGLAEPVGIWLGKHKYMVRSC+AD YY+RSFEGSCCV IV+VAT++MV+ F FW+FL AL TLP ALTLAEA SPHTMDTPFIMGVGGAMLYAII +L
Sbjct: 216 KVNYTRKVQHFAAYLVPLLFRPSPDCHCTGTLELSWGVWVTLIGFLVMIKPIREAVPLFMLQFNGLDRPEDRPHTLEWIIKYNIWPGEIMIVFFAHLFRQSYQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMVRSCDADKYYERSFEGSCCVFIVTVATIIMVFTSFATFWQFLVALLTLPMALTLAEAFSPHTMDTPFIMGVGGAMLYAIIKLL 432
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: A0A6H5J7Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y0_9PHAE) HSP 1 Score: 369 bits (947), Expect = 8.530e-126 Identity = 177/249 (71.08%), Postives = 196/249 (78.71%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPE--------------------------------DRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISIL 663
QVNYTRK+QHFAAYLVPLLF PS C C GTLELSWGVW+TL+GF VMIKPIREAIP+FMLQFNGLDRPE DRPHTLEWIIKYNIWPGE++IV F HLF +S Q++LVYILVFVTG+GDGLAEPVGIWLGKHKYMVRSC+AD YY+RSFEGSCCV +V+VAT++MV+ F FW+FL AL TLP ALTLAEA SPHTMDTPFIMGVGGAMLYAII +L
Sbjct: 122 QVNYTRKVQHFAAYLVPLLFRPSPDCYCTGTLELSWGVWVTLIGFLVMIKPIREAIPLFMLQFNGLDRPEGETATNTNTNNSAWISGPLATLPVGASSRCPQDRPHTLEWIIKYNIWPGEIMIVFFAHLFRQSYQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMVRSCDADKYYERSFEGSCCVFVVTVATIIMVFTSFATFWQFLVALLTLPMALTLAEAFSPHTMDTPFIMGVGGAMLYAIIKLL 370
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: D7G8M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M1_ECTSI) HSP 1 Score: 331 bits (848), Expect = 9.530e-113 Identity = 150/185 (81.08%), Postives = 170/185 (91.89%), Query Frame = 1
Query: 109 ELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISIL 663
+LSWGVW+TL+GF VMIKPIREAIP+FMLQFNGLDRPEDRPHTLEWIIKYNIWPGE++IV F HLF +S Q++LVYILVFVTG+GDGLAEPVGIWLGKHKYMVRSC+AD YY+RSFEGSCCV +V+VAT++MV+ F FW+FL AL TLP ALTLAEA SPHTMDTPFIMGVGGAMLYAII++L
Sbjct: 51 DLSWGVWVTLIGFLVMIKPIREAIPLFMLQFNGLDRPEDRPHTLEWIIKYNIWPGEIMIVFFAHLFLESNQRDLVYILVFVTGVGDGLAEPVGIWLGKHKYMVRSCDADKYYERSFEGSCCVFVVTVATIIMVFTSFATFWQFLVALLTLPMALTLAEAFSPHTMDTPFIMGVGGAMLYAIINLL 235
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: K3WMH4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMH4_GLOUD) HSP 1 Score: 247 bits (631), Expect = 1.350e-77 Identity = 116/216 (53.70%), Postives = 147/216 (68.06%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISI 660
+VNYTRK Q AAYL+PLL P CNC+G LEL+WG ++TLLGF V+IKPIRE FMLQFN LDRPEDRPHTL+WI+ N++PG +++ F LF ++ Q +LV+IL+FVT IGDGLAEPVGI GKHKY +C + Y RSFEGS CV I + + Y DFD + + LP + AEA +PHTMD P +M G +LY +I +
Sbjct: 180 KVNYTRKFQLLAAYLIPLLAKPDDSCNCNGPLELAWGDFVTLLGFLVLIKPIREKSTFFMLQFNSLDRPEDRPHTLKWIVAGNVFPGLFVLLFFRWLFERTTQSDLVFILIFVTSIGDGLAEPVGITFGKHKYSTSTCFSRRKYTRSFEGSACVFISGMVFPALQYFDFDTPMQLWVTMIVLPFVVAYAEATAPHTMDAPVLMTATGLVLYTVIHL 395
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: W4GWT5_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWT5_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.800e-77 Identity = 120/217 (55.30%), Postives = 156/217 (71.89%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISIL 663
+VNYTRKLQHFAAY+VPL+ N HG L L+WG + T++GF V+IKP+REA+ +FMLQFN LDRPEDRPHTL+WII NI PG L+++ F LFA++ +LVYI+VF+TG+GDGLAEPVGI GKHKY +C + Y RS+EGS CV + + + YADFDNF + L ++ LP + AEAI+PHTMDTP +M G +L+ I S +
Sbjct: 172 KVNYTRKLQHFAAYMVPLVLHT----NFHGPLALAWGDFFTMIGFLVLIKPVREALSVFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLLILMFFKWLFAENG--DLVYIIVFITGVGDGLAEPVGIMWGKHKYKTTACFSSRAYTRSWEGSACVFLSGMIFPALQYADFDNFTQVLVSMLVLPPTMAYAEAIAPHTMDTPVLMIGCGVILWFITSFI 382
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: A0A5D6Y2P1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2P1_9STRA) HSP 1 Score: 246 bits (628), Expect = 3.500e-77 Identity = 118/216 (54.63%), Postives = 148/216 (68.52%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISI 660
+VNYTRKLQ AAYL+PLL P C C+G LEL+WG ++TLLGF +IKP+RE FMLQFN LDRPEDRPHTL+WI+ N++PG +++ F LFA + Q +LV+ILVFVT IGDGLAEPVGI GKHKY SC + Y RSFEGS CV + + + YADF + + + LP + AEA +PHTMD P +M G +LYA+I I
Sbjct: 177 KVNYTRKLQLLAAYLIPLLVKPDAACACNGALELAWGDFVTLLGFLALIKPVRERATFFMLQFNSLDRPEDRPHTLKWIVAGNVFPGLFVLLFFRWLFATTTQADLVFILVFVTAIGDGLAEPVGIAFGKHKYSTSSCFSRRKYTRSFEGSACVFLSGMVFPALQYADFASPTQLWATMLVLPFVVAYAEATAPHTMDAPVLMTSTGLVLYAVIHI 392
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: A0A024TKV5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKV5_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.540e-76 Identity = 117/215 (54.42%), Postives = 153/215 (71.16%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIIS 657
+VNYTRKLQHFAAY+VPL+ N HG L L+WG + T++GF V+IKP+RE++ FMLQFN LDRPEDRPHTL+WII NI PG +++ F LFA++ +LVYI+VF+TGIGDGLAEPVGI GKHKY +C + Y RS+EGS CV + + + YADFD+F + L ++ LP + AEAI+PHTMDTP +M G +L+ I +
Sbjct: 42 KVNYTRKLQHFAAYMVPLVMHT----NFHGPLALAWGDFFTMIGFLVLIKPVRESLSFFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLFILMFFKWLFAENG--DLVYIIVFITGIGDGLAEPVGIMWGKHKYKTTACFSTRAYTRSWEGSTCVFLSGMIFPALQYADFDSFAQVLVSMIVLPPTMAYAEAIAPHTMDTPVLMIGCGIILWVITT 250
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: A0A1W0AB65_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB65_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.000e-75 Identity = 119/217 (54.84%), Postives = 153/217 (70.51%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISIL 663
+VNYTRKLQHFAAY+VPL+ N HG L L+WG + T++GF V+IKPIREA FMLQFN LDRPEDRPHTL+WII NI PG +++ F LF + Q L +I++F+TGIGDGLAEPVGI GKHKY RSC + Y RS+EGS CV + + + YA+FDNF++ L A+ LP + AEA +PHTMDTP +M GA+L+A+ ++
Sbjct: 178 KVNYTRKLQHFAAYMVPLVIHS----NYHGPLALAWGDFFTMMGFLVLIKPIREASTFFMLQFNSLDRPEDRPHTLDWIIAGNIAPGLFILLFFKWLFGE--QGALTFIIIFITGIGDGLAEPVGIAWGKHKYKTRSCFSTRKYTRSWEGSSCVFLSGMIFPALQYANFDNFYQVLLAMLILPPTMAYAEATAPHTMDTPVLMVGCGAILFALTRLV 388
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: A0A067BVC8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BVC8_SAPPC) HSP 1 Score: 239 bits (611), Expect = 4.770e-75 Identity = 123/217 (56.68%), Postives = 152/217 (70.05%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIISIL 663
+VNYTRKLQHFAAY+VPL+ S G L L+WG T++GFFV+IKPIREA FMLQFN LDRPEDRPHTL+WII NI PG +++ F LFA + NLV+I+VF+TGIGDGLAEPVGI GKHKY R+ + Y RS+EGS CV + + + YADFDNF + L A+ LP + AEAI+PHTMDTP +M G ++YAI + L
Sbjct: 149 KVNYTRKLQHFAAYMVPLVIHTSFS----GPLALAWGDLFTMVGFFVLIKPIREASSFFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLFILMFFKWLFATNG--NLVFIIVFITGIGDGLAEPVGIMWGKHKYKTRALFSTRKYTRSWEGSACVFLSGMIFPALQYADFDNFTQVLTAMLVLPPTMAYAEAIAPHTMDTPVLMIGCGFIMYAITTYL 359
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Match: A0A6G0WU77_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU77_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.350e-74 Identity = 119/215 (55.35%), Postives = 152/215 (70.70%), Query Frame = 1
Query: 13 QVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFVMIKPIREAIPIFMLQFNGLDRPEDRPHTLEWIIKYNIWPGELLIVLFTHLFAKSAQQNLVYILVFVTGIGDGLAEPVGIWLGKHKYMVRSCNADIYYQRSFEGSCCVLIVSVATVVMVYADFDNFWEFLFALCTLPTALTLAEAISPHTMDTPFIMGVGGAMLYAIIS 657
+VNYTRKLQHFAAY+VPL+ N G + L+WG + T++GF V+IKPIRE++ FMLQFN LDRPEDRPHTL+WII NI PG +++ F LFA++ +LVYI+VF+TGIGDGLAEPVGI GKHKY +C A Y RS+EGS CV + + + YADFDNF + L ++ LP + AEAI+PHTMDTP +M G +L+ I S
Sbjct: 173 KVNYTRKLQHFAAYMVPLVLHT----NFSGHIALAWGDFFTMIGFLVLIKPIRESLSFFMLQFNSLDRPEDRPHTLKWIIAGNIAPGLFILMFFKWLFAENG--DLVYIIVFITGIGDGLAEPVGIMWGKHKYKTTACFASRAYTRSWEGSACVFLSGMIFPALQYADFDNFTQVLVSMLVLPPTMAYAEAIAPHTMDTPVLMIGCGIILWFICS 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig578.13249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig578.13249.1 >prot_H-elongata_contig578.13249.1 ID=prot_H-elongata_contig578.13249.1|Name=mRNA_H-elongata_contig578.13249.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp HVRLQVNYTRKLQHFAAYLVPLLFSPSKGCNCHGTLELSWGVWMTLLGFFback to top mRNA from alignment at H-elongata_contig578:5070..7448- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig578.13249.1 ID=mRNA_H-elongata_contig578.13249.1|Name=mRNA_H-elongata_contig578.13249.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2379bp|location=Sequence derived from alignment at H-elongata_contig578:5070..7448- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig578:5070..7448- >mRNA_H-elongata_contig578.13249.1 ID=mRNA_H-elongata_contig578.13249.1|Name=mRNA_H-elongata_contig578.13249.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1332bp|location=Sequence derived from alignment at H-elongata_contig578:5070..7448- (Himanthalia elongata Himel1 dioecious)back to top |